Fat Droplets Identification in Liver Biopsies using Supervised Learning Techniques

Non-Alcoholic Fatty Liver Disease (NAFLD) is a frequent syndrome that exclusively refers to fat accumulation in liver and steatohepatitis1. It is considered as a massive disease ranging from 20% to 40% in adult populations of the Western World. Its prevalence is related to insulin resistance, which places individuals at high rates of mortality. An increased fat accumulation rate, can significantly increase the development of liver steatosis, which in later stages may progress into fibrosis and cirrhosis. In recent years, research groups focus on the automated fat detection based on histology and digital image processing. The current project, extends our previous work for the detection and quantification of fatty liver, by characterizing histological findings. It is an extensive study of supervised learning of fat droplet features, in order to exclude other findings from fat ratio computation. The method is evaluated on a set of 13 liver biopsy images, performing 92% accuracy.

[1]  R. Redfield,et al.  Measurement of the false positive rate in a screening program for human immunodeficiency virus infections. , 1988, The New England journal of medicine.

[2]  Scott L Nyberg,et al.  Assessment of donor liver steatosis: pathologist or automated software? , 2004, Human pathology.

[3]  C. Cavaro-Menard,et al.  Fuzzy algorithms to extract vacuoles of steatosis on liver histological color images , 2007, 2007 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[4]  Bruno Turlin,et al.  Assessment of hepatic steatosis: comparison of quantitative and semiquantitative methods in 108 liver biopsies , 2009, Liver international : official journal of the International Association for the Study of the Liver.

[5]  S. Ukabam,et al.  Quantitative assessment of fibrosis and steatosis in liver biopsies from patients with chronic hepatitis C , 2001, Journal of clinical pathology.

[6]  Alexandros T. Tzallas,et al.  Automated Detection of Liver Histopathological Findings Based on Biopsy Image Processing , 2017, Inf..

[7]  Joseph Bockhorst,et al.  Automatic classification of white regions in liver biopsies by supervised machine learning. , 2014, Human pathology.

[8]  Nazre Batool Detection and spatial analysis of hepatic steatosis in histopathology images using sparse linear models , 2016, 2016 Sixth International Conference on Image Processing Theory, Tools and Applications (IPTA).

[9]  Ameet Talwalkar,et al.  Foundations of Machine Learning , 2012, Adaptive computation and machine learning.

[10]  D Cascella,et al.  An innovative methodology for the automated morphometric and quantitative estimation of liver steatosis. , 2009, Histology and histopathology.

[11]  Simon Parsons,et al.  Introduction to Machine Learning, Second Editon by Ethem Alpaydin, MIT Press, 584 pp., ISBN 978-0-262-01243-0 , 2010, The Knowledge Engineering Review.

[12]  Richard E. Neapolitan,et al.  Artificial Intelligence: With an Introduction to Machine Learning, Second Edition , 2018 .

[13]  Jun Kong,et al.  Computer-Based Image Analysis of Liver Steatosis with Large-Scale Microscopy Imagery and Correlation with Magnetic Resonance Imaging Lipid Analysis , 2011, 2011 IEEE International Conference on Bioinformatics and Biomedicine.

[14]  K. Washington,et al.  Assessment of Hepatic Steatosis by Expert Pathologists: The End of a Gold Standard , 2009, Annals of surgery.

[15]  M. Kubát An Introduction to Machine Learning , 2017, Springer International Publishing.

[16]  Maurizio Vertemati,et al.  Automated lipid droplets recognition in human steatotic liver : some preliminary results , 2015 .

[17]  R. Brůha,et al.  Alcoholic liver disease. , 2012, World journal of hepatology.

[18]  M. Shermer The Skeptic Encyclopedia of Pseudoscience , 2002 .

[19]  Francois Berthiaume,et al.  Automated image analysis method for detecting and quantifying macrovesicular steatosis in hematoxylin and eosin–stained histology images of human livers , 2014, Liver transplantation : official publication of the American Association for the Study of Liver Diseases and the International Liver Transplantation Society.

[20]  Sarah Jane Delany k-Nearest Neighbour Classifiers , 2007 .