A SAS macro for the analysis of cell survival curves

This paper describes a SAS macro for the statistical analyses of cell survival data obtained after radiation treatment using the methods of R.E. Tarone et al. (Mutation Research 111 (1983) 79-96). These analyses are usually required on a routine basis by all biomedical research laboratories involved in cell survival assays generating dose-response curves aimed at characterizing radiosensitive mutant cell strains or individuals whose body cells exhibit enhanced sensitivity to radiation and other genotoxic agents. Statistical methods of linear regression are applied to data from repeated experiments with a cell line/strain and weighted estimates of a common slope and its variance are obtained. The methods are currently implemented in two APL programs. These programs are not easily accessible to most biomedical statisticians and researchers because APL is not a common software tool for statistical analysis. Implementation of these methods in SAS, a widely used commercial software for statistical analysis, is expected to help resolve this issue. We illustrate the application of the macro using an example data set obtained in our laboratory, and hope that other investigators may find it useful in analyzing their data.

[1]  K H Chadwick,et al.  A molecular theory of cell survival. , 1973, Physics in medicine and biology.

[2]  M. Hannan,et al.  Skin fibroblast cell lines derived from non‐hodgkin's‐lymphoma (NHL) patients show increased sensitivity to chronic gamma irradiation , 1991, International journal of cancer.

[3]  P. Deschavanne,et al.  Re-evaluation of in vitro radiosensitivity of human fibroblasts of different genetic origins. , 1986, International journal of radiation biology and related studies in physics, chemistry, and medicine.

[4]  M. Hannan,et al.  Cellular radiosensitivity of patients with papillary thyroid cancer. , 1999, Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology.

[5]  A. Dietz,et al.  In vitro radiosensitivity of primary human fibroblasts. Lack of correlation with acute radiation toxicity in patients with head and neck cancer. , 1997, Radiotherapy and oncology : journal of the European Society for Therapeutic Radiology and Oncology.

[6]  L. Edler,et al.  Computational statistics for cell survival curves. I. Evaluation of the colony-forming ability of a single cell strain by the APL function CFALINE. , 1985, Computer methods and programs in biomedicine.

[7]  D. Scudiero,et al.  Statistical methods for in vitro cell survival assays. , 1983, Mutation research.