Segmented medical images based simulations of Cardiac electrical activity and electrocardiogram: a model comparison

The purposes of this work is to compare the action potential and electrocardiogram computed with the monodomain and bidomain models, using a patient-based two-dimensional geometry of the heart-torso. The pipeline from CT scans to image segmentation with an in-house level set method, then to mesh generation is detailed in the article. Our segmentation technique is based on a new iterative Chan-Vese method. The bidomain model and its approximation called the ``adapted'' monodomain model are next introduced. The numerical methods used to solve these two models are briefly presented. Using both uni- and two-dimensional test cases, we next assess the mesh size required to control the error on the conduction velocities, a main source of error in cardiac action potential computations. We show with quantitative estimates that a main parameter controlling the mesh size is the cell membrane surface-to-volume ratio, noted $\am$. Realistic $\am$ of about $1500-2000$ cm$^{-1}$ for human hearts still require major computational resources. We then compare our numerical solutions and the electrocardiogram recovered with both models on our heart-torso geometry. Activation sites are chosen so that the depolarisation isochrons closely match experimental results in human hearts for healthy cardiac propagation. Both models give similar solutions whereas the bidomain model is about 20-50 times more CPU intensive than the adapted monodomain model. The main computational effort goes in the computation of the extra-cellular and extra-cardiac potentials in the heart-torso. We show that the equations for these potentials must be solved with sufficient accuracy, otherwise compromising the quality of the computed electrocardiograms.

[1]  B. Roth,et al.  Action potential propagation in a thick strand of cardiac muscle. , 1991, Circulation research.

[2]  A. Tveito,et al.  Modeling the electrical activity of the heart: A Bidomain Model of the ventricles embedded in a torso , 2002 .

[3]  B M Horácek,et al.  Computer model of excitation and recovery in the anisotropic myocardium. II. Excitation in the simplified left ventricle. , 1991, Journal of electrocardiology.

[4]  Y. Coudière,et al.  Stability and convergence of a finite volume method for two systems of reaction-diffusion equations in electro-cardiology , 2006 .

[5]  B. Taccardi,et al.  Simulating patterns of excitation, repolarization and action potential duration with cardiac Bidomain and Monodomain models. , 2005, Mathematical biosciences.

[6]  Martin Buist,et al.  Torso Coupling Techniques for the Forward Problem of Electrocardiography , 2002, Annals of Biomedical Engineering.

[7]  L. Guerri,et al.  Oblique dipole layer potentials applied to electrocardiology , 1983, Journal of mathematical biology.

[8]  L. Clerc Directional differences of impulse spread in trabecular muscle from mammalian heart. , 1976, The Journal of physiology.

[9]  D. Mumford,et al.  Optimal approximations by piecewise smooth functions and associated variational problems , 1989 .

[10]  P. C. Franzone,et al.  Spreading of excitation in 3-D models of the anisotropic cardiac tissue. I. Validation of the eikonal model. , 1993, Mathematical biosciences.

[11]  K.H.W.J. ten Tusscher,et al.  Comments on 'A model for human ventricular tissue' : reply , 2005 .

[12]  Mark Potse,et al.  A Comparison of Monodomain and Bidomain Reaction-Diffusion Models for Action Potential Propagation in the Human Heart , 2006, IEEE Transactions on Biomedical Engineering.

[13]  Jukka Nenonen,et al.  Modeling Cardiac Ventricular Activation , 2001 .

[14]  OmerBerenfeld,et al.  Purkinje-Muscle Reentry as a Mechanism of Polymorphic Ventricular Arrhythmias in a 3-Dimensional Model of the Ventricles , 1998 .

[15]  B. Taccardi,et al.  The influence of torso inhomogeneities on epicardial potentials , 1994, Computers in Cardiology 1994.

[16]  L. Ambrosio,et al.  On the asymptotic behaviour of anisotropic energies arising in the cardiac bidomain model , 2000 .

[17]  James P. Keener,et al.  Re-entry in three-dimensional Fitzhugh-Nagumo medium with rotational anisotropy , 1995 .

[18]  Youssef Belhamadia,et al.  Towards accurate numerical method for monodomain models using a realistic heart geometry. , 2009, Mathematical biosciences.

[19]  P. Savard,et al.  Extracellular Measurement of Anisotropic Bidomain Myocardial Conductivities. I. Theoretical Analysis , 2001, Annals of Biomedical Engineering.

[20]  P. C. Franzone,et al.  Wavefront propagation in an activation model of the anisotropic cardiac tissue: asymptotic analysis and numerical simulations , 1990, Journal of mathematical biology.

[21]  Marc Ethier,et al.  Semi-Implicit Time-Discretization Schemes for the Bidomain Model , 2008, SIAM J. Numer. Anal..

[22]  Yves Coudière,et al.  2D/3D Discrete Duality Finite Volume (DDFV) scheme for anisotropic- heterogeneous elliptic equations, application to the electrocardiogram simulation. , 2008 .

[23]  Anthony J. Yezzi,et al.  Curve evolution implementation of the Mumford-Shah functional for image segmentation, denoising, interpolation, and magnification , 2001, IEEE Trans. Image Process..

[24]  R C Barr,et al.  Extracellular discontinuities in cardiac muscle: evidence for capillary effects on the action potential foot. , 1998, Circulation research.

[25]  Per-Olof Persson,et al.  A Simple Mesh Generator in MATLAB , 2004, SIAM Rev..

[26]  W. Krassowska,et al.  Effective boundary conditions for syncytial tissues , 1994, IEEE Transactions on Biomedical Engineering.

[27]  Ronald F. Gariepy FUNCTIONS OF BOUNDED VARIATION AND FREE DISCONTINUITY PROBLEMS (Oxford Mathematical Monographs) , 2001 .

[28]  Marco Veneroni,et al.  Reaction–diffusion systems for the microscopic cellular model of the cardiac electric field , 2006 .

[29]  L. Guerri,et al.  Oblique double layer potentials for the direct and inverse problems of electrocardiology , 1984 .

[30]  L. Ambrosio,et al.  Functions of Bounded Variation and Free Discontinuity Problems , 2000 .

[31]  B. Taccardi,et al.  Potential Fields Generated by Oblique Dipole Layers Modeling Excitation Wavefronts in the Anisotropic Myocardium: Comparison with Potential Fields Elicited by Paced Dog Hearts in a Volume Conductor , 1982, Circulation research.

[32]  S. Tentoni,et al.  Mathematical modeling of the excitation process in myocardial tissue: influence of fiber rotation on wavefront propagation and potential field. , 1990, Mathematical biosciences.

[33]  Nicolas P Smith,et al.  Altered T Wave Dynamics in a Contracting Cardiac Model , 2003, Journal of cardiovascular electrophysiology.

[34]  Y. Bourgault,et al.  Existence and uniqueness of the solution for the bidomain model used in cardiac electrophysiology , 2009 .

[35]  James P. Keener,et al.  Propagation and its failure in coupled systems of discrete excitable cells , 1987 .

[36]  Tony F. Chan,et al.  Active contours without edges , 2001, IEEE Trans. Image Process..

[37]  B. Taccardi,et al.  Spread of excitation in 3-D models of the anisotropic cardiac tissue. II. Effects of fiber architecture and ventricular geometry. , 1998, Mathematical biosciences.

[38]  A. J. Pullan,et al.  Mathematical models and numerical methods for the forward problem in cardiac electrophysiology , 2002 .

[39]  C. Luo,et al.  A dynamic model of the cardiac ventricular action potential. I. Simulations of ionic currents and concentration changes. , 1994, Circulation research.

[40]  A. Hodgkin,et al.  A quantitative description of membrane current and its application to conduction and excitation in nerve , 1952, The Journal of physiology.

[41]  M. Spach,et al.  Relating Extracellular Potentials and Their Derivatives to Anisotropic Propagation at a Microscopic Level in Human Cardiac Muscle: Evidence for Electrical Uncoupling of Side‐to‐Side Fiber Connections with Increasing Age , 1986, Circulation research.

[42]  Giuseppe Savaré,et al.  Degenerate Evolution Systems Modeling the Cardiac Electric Field at Micro- and Macroscopic Level , 2002 .

[43]  W. Krassowska,et al.  Homogenization of syncytial tissues. , 1993, Critical reviews in biomedical engineering.

[44]  Pascal Omnes,et al.  A FINITE VOLUME METHOD FOR THE LAPLACE EQUATION ON ALMOST ARBITRARY TWO-DIMENSIONAL GRIDS , 2005 .

[45]  D. Durrer,et al.  Total Excitation of the Isolated Human Heart , 1970, Circulation.

[46]  Jens Lang,et al.  Konrad-zuse-zentrum F ¨ Ur Informationstechnik Berlin Adaptivity in Space and Time for Reaction-diffusion Systems in Electrocardiology Adaptivity in Space and Time for Reaction-diffusion Systems in Electrocardiology , 2022 .

[47]  F. Hermeline,et al.  A Finite Volume Method for the Approximation of Diffusion Operators on Distorted Meshes , 2000 .

[48]  Andrew J. Pullan,et al.  The effect of torso impedance on epicardial and body surface potentials: a modeling study , 2003, IEEE Transactions on Biomedical Engineering.

[49]  J. Nenonen,et al.  Activation Dynamics in Anisotropic Cardiac Tissue via Decoupling , 2004, Annals of Biomedical Engineering.