Tandem mass spectrometry for measuring stable-isotope labeling.
暂无分享,去创建一个
[1] Gregory Stephanopoulos,et al. Accurate assessment of amino acid mass isotopomer distributions for metabolic flux analysis. , 2007, Analytical chemistry.
[2] Y. Shachar-Hill,et al. Quantifying the Labeling and the Levels of Plant Cell Wall Precursors Using Ion Chromatography Tandem Mass Spectrometry1[W][OA] , 2010, Plant Physiology.
[3] Scott B. Crown,et al. Rational design of 13C-labeling experiments for metabolic flux analysis in mammalian cells , 2012, BMC Systems Biology.
[4] Maciek R Antoniewicz,et al. Selection of tracers for 13C-metabolic flux analysis using elementary metabolite units (EMU) basis vector methodology. , 2012, Metabolic engineering.
[5] C. Zupke. Metabolic flux analysis in mammalian cell culture , 1993 .
[6] Wenyun Lu,et al. Separation and quantitation of water soluble cellular metabolites by hydrophilic interaction chromatography-tandem mass spectrometry. , 2006, Journal of chromatography. A.
[7] Jamey D. Young,et al. Mapping photoautotrophic metabolism with isotopically nonstationary (13)C flux analysis. , 2011, Metabolic engineering.
[8] G. Stephanopoulos,et al. Elementary metabolite units (EMU): a novel framework for modeling isotopic distributions. , 2007, Metabolic engineering.
[9] W. Wiechert. 13C metabolic flux analysis. , 2001, Metabolic engineering.
[10] R. Bergman,et al. Metabolic syndrome, hyperinsulinemia, and cancer. , 2007, The American journal of clinical nutrition.
[11] Maciek R Antoniewicz,et al. Measuring complete isotopomer distribution of aspartate using gas chromatography/tandem mass spectrometry. , 2012, Analytical chemistry.
[12] Gregory Stephanopoulos,et al. Quantifying Reductive Carboxylation Flux of Glutamine to Lipid in a Brown Adipocyte Cell Line* , 2008, Journal of Biological Chemistry.
[13] T. Mimura,et al. Development of a comprehensive analytical method for phosphate metabolites in plants by ion chromatography coupled with tandem mass spectrometry. , 2005, Journal of chromatography. A.
[14] Christoph Wittmann,et al. Metabolic fluxes and beyond—systems biology understanding and engineering of microbial metabolism , 2010, Applied Microbiology and Biotechnology.
[15] Elmar Heinzle,et al. Isotope labeling experiments in metabolomics and fluxomics , 2012, Wiley interdisciplinary reviews. Systems biology and medicine.
[16] Masaru Tomita,et al. Metabolic regulation analysis of wild-type and arcA mutant Escherichia coli under nitrate conditions using different levels of omics data. , 2012, Molecular bioSystems.
[17] Maciek R Antoniewicz,et al. Tandem mass spectrometry: a novel approach for metabolic flux analysis. , 2011, Metabolic engineering.
[18] T. Szyperski. Biosynthetically directed fractional 13C-labeling of proteinogenic amino acids. An efficient analytical tool to investigate intermediary metabolism. , 1995, European journal of biochemistry.
[19] Jamey D. Young,et al. An elementary metabolite unit (EMU) based method of isotopically nonstationary flux analysis , 2008, Biotechnology and bioengineering.
[20] Hilal Taymaz-Nikerel,et al. Fast sampling of the cellular metabolome. , 2012, Methods in molecular biology.
[21] M. Antoniewicz,et al. Towards dynamic metabolic flux analysis in CHO cell cultures , 2012, Biotechnology journal.
[22] C. Maranas,et al. Identification of optimal measurement sets for complete flux elucidation in metabolic flux analysis experiments. , 2008, Biotechnology and bioengineering.
[23] Craig R Malloy,et al. 13C isotopomer analysis of glutamate by tandem mass spectrometry. , 2002, Analytical biochemistry.
[24] Gregory Stephanopoulos,et al. Measuring deuterium enrichment of glucose hydrogen atoms by gas chromatography/mass spectrometry. , 2011, Analytical chemistry.
[25] S. K. Masakapalli,et al. Strategies for investigating the plant metabolic network with steady-state metabolic flux analysis: lessons from an Arabidopsis cell culture and other systems. , 2012, Journal of experimental botany.
[26] M. Antoniewicz,et al. Metabolic flux analysis of CHO cells at growth and non-growth phases using isotopic tracers and mass spectrometry. , 2011, Metabolic engineering.
[27] Juho Rousu,et al. Isotopomer distribution computation from tandem mass spectrometric data with overlapping fragment spectra , 2005 .
[28] Wim Soetaert,et al. Microbial metabolomics: past, present and future methodologies , 2006, Biotechnology Letters.
[29] Joerg M. Buescher,et al. Ultrahigh performance liquid chromatography-tandem mass spectrometry method for fast and robust quantification of anionic and aromatic metabolites. , 2010, Analytical chemistry.
[30] M. Antoniewicz,et al. Parallel labeling experiments with [U-13C]glucose validate E. coli metabolic network model for 13C metabolic flux analysis. , 2012, Metabolic engineering.
[31] Jean-Charles Portais,et al. Determination of carbon labeling distribution of intracellular metabolites from single fragment ions by ion chromatography tandem mass spectrometry. , 2007, Analytical biochemistry.
[32] G. Stephanopoulos,et al. Metabolic flux analysis in a nonstationary system: fed-batch fermentation of a high yielding strain of E. coli producing 1,3-propanediol. , 2007, Metabolic engineering.
[33] Volker Sandig,et al. Metabolite channeling and compartmentation in the human cell line AGE1.HN determined by 13C labeling experiments and 13C metabolic flux analysis. , 2011, Journal of bioscience and bioengineering.
[34] J. V. van Dam,et al. Analysis of glycolytic intermediates with ion chromatography- and gas chromatography-mass spectrometry. , 2011, Methods in molecular biology.
[35] Elmar Heinzle,et al. Metabolic flux analysis in eukaryotes. , 2010, Current opinion in biotechnology.
[36] Elmar Heinzle,et al. Metabolic flux analysis in systems biology of mammalian cells. , 2012, Advances in biochemical engineering/biotechnology.
[37] K. Shimizu,et al. Determination of metabolic flux changes during fed-batch cultivation from measurements of intracellular amino acids by LC-MS/MS. , 2007, Journal of biotechnology.
[38] M. Antoniewicz,et al. Dynamic metabolic flux analysis (DMFA): a framework for determining fluxes at metabolic non-steady state. , 2011, Metabolic engineering.
[39] L. Alberghina,et al. From cancer metabolism to new biomarkers and drug targets. , 2012, Biotechnology advances.
[40] Joshua D Rabinowitz,et al. Metabolomics in systems microbiology. , 2011, Current opinion in biotechnology.
[41] K. Shimbo,et al. Multifunctional and highly sensitive precolumn reagents for amino acids in liquid chromatography/tandem mass spectrometry. , 2009, Analytical chemistry.
[42] E. Fukusaki,et al. Quantitative analysis of anionic metabolites for Catharanthus roseus by capillary electrophoresis using sulfonated capillary coupled with electrospray ionization-tandem mass spectrometry. , 2008, Journal of bioscience and bioengineering.
[43] Christian M. Metallo,et al. Elucidation of cellular metabolism via metabolomics and stable-isotope assisted metabolomics. , 2011, Current pharmaceutical biotechnology.
[44] T. Szyperski. Biosynthetically Directed Fractional 13C‐labeling of Proteinogenic Amino Acids , 1995 .
[45] Juho Rousu,et al. Computing positional isotopomer distributions from tandem mass spectrometric data. , 2002, Metabolic engineering.
[46] L. Quek,et al. OpenFLUX: efficient modelling software for 13C-based metabolic flux analysis , 2009, Microbial cell factories.
[47] H. Lange,et al. Analysis of glycolytic intermediates in Saccharomyces cerevisiae using anion exchange chromatography and electrospray ionization with tandem mass spectrometric detection , 2002 .
[48] Gregory Stephanopoulos,et al. Determination of confidence intervals of metabolic fluxes estimated from stable isotope measurements. , 2006, Metabolic engineering.
[49] Tomohisa Hasunuma,et al. Metabolic turnover analysis by a combination of in vivo 13C-labelling from 13CO2 and metabolic profiling with CE-MS/MS reveals rate-limiting steps of the C3 photosynthetic pathway in Nicotiana tabacum leaves , 2009, Journal of experimental botany.
[50] Michael C. Jewett,et al. Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p , 2009, Proceedings of the National Academy of Sciences.
[51] M. Lidstrom,et al. Streamlined pentafluorophenylpropyl column liquid chromatography-tandem quadrupole mass spectrometry and global (13)C-labeled internal standards improve performance for quantitative metabolomics in bacteria. , 2010, Journal of chromatography. A.
[52] Wolfgang Wiechert,et al. Collisional fragmentation of central carbon metabolites in LC‐MS/MS increases precision of 13C metabolic flux analysis , 2012, Biotechnology and bioengineering.
[53] M. Dauner. From fluxes and isotope labeling patterns towards in silico cells. , 2010, Current opinion in biotechnology.