Advances in photosynthesis and respiration

[1]  Ulrik Brandes,et al.  Biological Networks , 2013, Handbook of Graph Drawing and Visualization.

[2]  J C Schaff,et al.  Virtual Cell modelling and simulation software environment. , 2008, IET systems biology.

[3]  Michael Hucka,et al.  LibSBML: an API Library for SBML , 2008, Bioinform..

[4]  Jacky L. Snoep,et al.  BioModels Database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems , 2005, Nucleic Acids Res..

[5]  Edda Klipp,et al.  SBMLmerge, a system for combining biochemical network models. , 2006, Genome informatics. International Conference on Genome Informatics.

[6]  Hugh D. Spence,et al.  Minimum information requested in the annotation of biochemical models (MIRIAM) , 2005, Nature Biotechnology.

[7]  George M Church,et al.  From systems biology to synthetic biology , 2005, Molecular systems biology.

[8]  Sarah M. Keating,et al.  Evolving a lingua franca and associated software infrastructure for computational systems biology: the Systems Biology Markup Language (SBML) project. , 2004, Systems biology.

[9]  Jacky L. Snoep,et al.  Web-based kinetic modelling using JWS Online , 2004, Bioinform..

[10]  Catherine M Lloyd,et al.  CellML: its future, present and past. , 2004, Progress in biophysics and molecular biology.

[11]  L. Loew,et al.  Quantitative cell biology with the Virtual Cell. , 2003, Trends in cell biology.

[12]  J. Snoep,et al.  JWS online cellular systems modelling and microbiology. , 2003, Microbiology.

[13]  Hiroaki Kitano,et al.  The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models , 2003, Bioinform..

[14]  James M. Bower,et al.  The GENESIS Simulation System , 2003 .

[15]  Leslie M Loew,et al.  Computational cell biology: spatiotemporal simulation of cellular events. , 2002, Annual review of biophysics and biomolecular structure.

[16]  Denis Noble,et al.  The rise of computational biology , 2002, Nature Reviews Molecular Cell Biology.

[17]  J. Doyle,et al.  Reverse Engineering of Biological Complexity , 2002, Science.

[18]  A. Arkin.  Synthetic cell biology. , 2001, Current opinion in biotechnology.

[19]  Tom Misteli,et al.  Kinetic modelling approaches to in vivo imaging , 2001, Nature Reviews Molecular Cell Biology.

[20]  Kathy Chen,et al.  Network dynamics and cell physiology , 2001, Nature Reviews Molecular Cell Biology.

[21]  W. J. Hedley,et al.  A short introduction to CellML , 2001, Philosophical Transactions of the Royal Society of London. Series A: Mathematical, Physical and Engineering Sciences.

[22]  R. Brent,et al.  Modelling cellular behaviour , 2001, Nature.

[23]  Scott E Fraser,et al.  The Molecular Metamorphosis of Experimental Embryology , 2000, Cell.

[24]  J. Hopfield,et al.  From molecular to modular cell biology , 1999, Nature.

[25]  A. Arkin,et al.  It's a noisy business! Genetic regulation at the nanomolar scale. , 1999, Trends in genetics : TIG.

[26]  Nicholas T. Carnevale,et al.  The NEURON Simulation Environment , 1997, Neural Computation.