Algal Functional Annotation Tool: a web-based analysis suite to functionally interpret large gene lists using integrated annotation and expression data
暂无分享,去创建一个
Matteo Pellegrini | David López | Shawn Cokus | David Casero | Sabeeha S. Merchant | M. Pellegrini | Shawn Cokus | D. Casero | S. Merchant | David López
[1] Robert D. Finn,et al. InterPro: the integrative protein signature database , 2008, Nucleic Acids Res..
[2] J. W. Peters,et al. Engineering algae for biohydrogen and biofuel production. , 2009, Current opinion in biotechnology.
[3] C. Howe,et al. Biodiesel from algae: challenges and prospects. , 2010, Current opinion in biotechnology.
[4] M. Campbell,et al. PANTHER: a library of protein families and subfamilies indexed by function. , 2003, Genome research.
[5] L. Holm,et al. The Pfam protein families database , 2005, Nucleic Acids Res..
[6] Brad T. Sherman,et al. Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists , 2008, Nucleic acids research.
[7] Lincoln Stein,et al. Reactome knowledgebase of human biological pathways and processes , 2008, Nucleic Acids Res..
[8] Jean-Michel Claverie,et al. The Chlorella variabilis NC64A Genome Reveals Adaptation to Photosymbiosis, Coevolution with Viruses, and Cryptic Sex[C][W] , 2010, Plant Cell.
[9] A. Salamov,et al. Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas , 2009, Science.
[10] W. Marshall,et al. Basal bodies platforms for building cilia. , 2008, Current topics in developmental biology.
[11] A. Hemschemeier,et al. Analytical approaches to photobiological hydrogen production in unicellular green algae , 2009, Photosynthesis Research.
[12] Jonathan M. Scholey,et al. Intraflagellar Transport and Cilium-Based Signaling , 2006, Cell.
[13] Brad T. Sherman,et al. Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources , 2008, Nature Protocols.
[14] M. Ashburner,et al. Gene Ontology: tool for the unification of biology , 2000, Nature Genetics.
[15] Jens Rupprecht,et al. From systems biology to fuel--Chlamydomonas reinhardtii as a model for a systems biology approach to improve biohydrogen production. , 2009, Journal of biotechnology.
[16] Darren A. Natale,et al. The COG database: an updated version includes eukaryotes , 2003, BMC Bioinformatics.
[17] Wallace F. Marshall,et al. Chapter 1 Basal Bodies , 2008 .
[18] BMC Bioinformatics , 2005 .
[19] Robert E. Jinkerson,et al. Genetic Engineering of Algae for Enhanced Biofuel Production , 2010, Eukaryotic Cell.
[20] Hervé Moreau,et al. Genomic insights into photosynthesis in eukaryotic phytoplankton. , 2010, Trends in plant science.
[21] M. Ghirardi,et al. Photobiological hydrogen-producing systems. , 2009, Chemical Society reviews.
[22] Shin-Han Shiu,et al. Changes in Transcript Abundance in Chlamydomonas reinhardtii following Nitrogen Deprivation Predict Diversion of Metabolism1[W][OA] , 2010, Plant Physiology.
[23] W. J. V. Osterhout,et al. ON THE DYNAMICS OF PHOTOSYNTHESIS , 1918, The Journal of general physiology.
[24] Nicholas H. Putnam,et al. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation , 2007, Proceedings of the National Academy of Sciences.
[25] Sara L. Zimmer,et al. The Chlamydomonas Genome Reveals the Evolution of Key Animal and Plant Functions , 2007, Science.
[26] E. H. Harris,et al. CHLAMYDOMONAS AS A MODEL ORGANISM. , 2003, Annual review of plant physiology and plant molecular biology.
[27] Matteo Pellegrini,et al. RNA-Seq Analysis of Sulfur-Deprived Chlamydomonas Cells Reveals Aspects of Acclimation Critical for Cell Survival[W] , 2010, Plant Cell.
[28] Olaf Kruse,et al. Microalgal hydrogen production. , 2010, Current opinion in biotechnology.
[29] J. Rochaix,et al. Genetics of the Biogenesis and Dynamics of the Photosynthetic Machinery in Eukaryotes , 2004, The Plant Cell Online.
[30] Susumu Goto,et al. KEGG for representation and analysis of molecular networks involving diseases and drugs , 2009, Nucleic Acids Res..
[31] S. Rhee,et al. MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes. , 2004, The Plant journal : for cell and molecular biology.
[32] Simon Prochnik,et al. Novel metabolism in Chlamydomonas through the lens of genomics. , 2007, Current opinion in plant biology.
[33] B. De Baets,et al. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. , 2006, Proceedings of the National Academy of Sciences of the United States of America.