MicroRNA-21 Promotes Fibrosis of the Kidney by Silencing Metabolic Pathways

MicroRNA-21 contributes to fibrosis in the kidney by posttranscriptionally regulating lipid metabolism genes. Defeating Fibrosis Although small—just 22 nucleotides in length—microRNA-21 (miR-21) packs a mighty punch, posttranscriptionally regulating the expression of many genes. Furthermore, miR-21 dysregulation has been linked to cardiac disease and cancer. Now, Chau et al. show that dysregulated miR-21 also contributes to kidney fibrosis, an inappropriate wound-healing response that promotes organ failure. The authors first identified miRNAs that were up-regulated in two mouse models of kidney injury. On the basis of preliminary analyses, Chau et al. focused on miR-21. In mice, miR-21 is up-regulated in the kidney soon after injury, before fibrosis appears. Moreover, miR-21 is up-regulated in human kidneys from patients with problems such as acute kidney injury. Although mice that lack miR-21 are healthy and display relatively normal gene expression in the kidney, after injury, a derepressed set of miR-21 target mRNAs becomes apparent, and they develop much less fibrosis than their littermates that express miR-21. In normal mice, inhibition of miR-21 with complementary oligonucleotides likewise reduces kidney fibrosis after injury. To understand how miR-21 amplifies kidney fibrosis, the authors examined kidney gene expression profiles in mice with and without miR-21 after kidney injury. About 700 genes were derepressed in kidneys from mice without miR-21; surprisingly, genes involved in metabolic pathways—particularly involving fatty acid and lipid oxidation—were among the up-regulated genes, whereas those involved in immune or cell proliferation pathways were not. One derepressed gene, encoding peroxisome proliferator–activated receptor α (PPARα), a regulator of lipid metabolism, is a direct target of miR-21. Overexpression of PPARα in the kidney during injury inhibited fibrosis in mice; conversely, in mice that lacked PPARα, inhibition of miR-21 no longer protected against kidney fibrosis. The finding that miR-21 is a major player in kidney fibrosis suggests that drugs that inhibit miR-21, like the complementary oligonucleotides used in this study, might prove to be useful therapies in humans. Scarring of the kidney is a major public health concern, directly promoting loss of kidney function. To understand the role of microRNA (miRNA) in the progression of kidney scarring in response to injury, we investigated changes in miRNA expression in two kidney fibrosis models and identified 24 commonly up-regulated miRNAs. Among them, miR-21 was highly elevated in both animal models and in human transplanted kidneys with nephropathy. Deletion of miR-21 in mice resulted in no overt abnormality. However, miR-21−/− mice suffered far less interstitial fibrosis in response to kidney injury, a phenotype duplicated in wild-type mice treated with anti–miR-21 oligonucleotides. Global derepression of miR-21 target mRNAs was readily detectable in miR-21−/− kidneys after injury. Analysis of gene expression profiles up-regulated in the absence of miR-21 identified groups of genes involved in metabolic pathways, including the lipid metabolism pathway regulated by peroxisome proliferator–activated receptor-α (Pparα), a direct miR-21 target. Overexpression of Pparα prevented ureteral obstruction–induced injury and fibrosis. Pparα deficiency abrogated the antifibrotic effect of anti–miR-21 oligonucleotides. miR-21 also regulated the redox metabolic pathway. The mitochondrial inhibitor of reactive oxygen species generation Mpv17l was repressed by miR-21, correlating closely with enhanced oxidative kidney damage. These studies demonstrate that miR-21 contributes to fibrogenesis and epithelial injury in the kidney in two mouse models and is a candidate target for antifibrotic therapies.

[1]  E. Abraham,et al.  Identification of a microRNA signature in renal fibrosis: role of miR-21. , 2011, American journal of physiology. Renal physiology.

[2]  Xiao-ming Meng,et al.  Smad3-mediated upregulation of miR-21 promotes renal fibrosis. , 2011, Journal of the American Society of Nephrology : JASN.

[3]  S. Subramaniam,et al.  MicroRNA-21 targets peroxisome proliferators-activated receptor-α in an autoregulatory loop to modulate flow-induced endothelial inflammation , 2011, Proceedings of the National Academy of Sciences.

[4]  J. Duffield,et al.  Mechanisms of fibrosis: the role of the pericyte , 2011, Current opinion in nephrology and hypertension.

[5]  C. Kuo,et al.  Targeting endothelium-pericyte cross talk by inhibiting VEGF receptor signaling attenuates kidney microvascular rarefaction and fibrosis. , 2011, The American journal of pathology.

[6]  S. Friedman,et al.  Pathogenesis of liver fibrosis. , 2011, Annual review of pathology.

[7]  T. Thatcher,et al.  PPAR-γ Ligands Repress TGFβ-Induced Myofibroblast Differentiation by Targeting the PI3K/Akt Pathway: Implications for Therapy of Fibrosis , 2011, PloS one.

[8]  L. Racusen,et al.  The pathology of chronic allograft dysfunction. , 2010, Kidney international. Supplement.

[9]  Anton J. Enright,et al.  SylArray: a web server for automated detection of miRNA effects from expression data , 2010, Bioinform..

[10]  S. Kauppinen,et al.  Stress-dependent cardiac remodeling occurs in the absence of microRNA-21 in mice. , 2010, The Journal of clinical investigation.

[11]  E. Olson,et al.  Modulation of K-Ras-dependent lung tumorigenesis by MicroRNA-21. , 2010, Cancer cell.

[12]  F. Slack,et al.  OncomiR addiction in an in vivo model of microRNA-21-induced pre-B-cell lymphoma , 2010, Nature.

[13]  J. Iacomini,et al.  Identification of a microRNA signature of renal ischemia reperfusion injury , 2010, Proceedings of the National Academy of Sciences.

[14]  T. Shioda,et al.  MicroRNA-33 and the SREBP Host Genes Cooperate to Control Cholesterol Homeostasis , 2010, Science.

[15]  N. Kaminski,et al.  miR-21 mediates fibrogenic activation of pulmonary fibroblasts and lung fibrosis , 2010, The Journal of experimental medicine.

[16]  Jie J. Zheng,et al.  Macrophage Wnt7b is critical for kidney repair and regeneration , 2010, Proceedings of the National Academy of Sciences.

[17]  Ajay K. Singh,et al.  Serum Amyloid P Inhibits Fibrosis Through FcγR-Dependent Monocyte-Macrophage Regulation in Vivo , 2009, Science Translational Medicine.

[18]  W. Branham,et al.  Transgenic expression of proximal tubule peroxisome proliferator-activated receptor-alpha in mice confers protection during acute kidney injury. , 2009, Kidney international.

[19]  Li-jun Ma,et al.  The PPARgamma agonist pioglitazone ameliorates aging-related progressive renal injury. , 2009, Journal of the American Society of Nephrology : JASN.

[20]  K. Park,et al.  Reactive oxygen species/oxidative stress contributes to progression of kidney fibrosis following transient ischemic injury in mice. , 2009, American journal of physiology. Renal physiology.

[21]  C. Stoeckert,et al.  Renal gene and protein expression signatures for prediction of kidney disease progression. , 2009, The American journal of pathology.

[22]  J. Doudna,et al.  A three-dimensional view of the molecular machinery of RNA interference , 2009, Nature.

[23]  W. Rottbauer,et al.  MicroRNA-21 contributes to myocardial disease by stimulating MAP kinase signalling in fibroblasts , 2008, Nature.

[24]  Anton J. Enright,et al.  Detecting microRNA binding and siRNA off-target effects from expression data , 2008, Nature Methods.

[25]  W. Ju,et al.  Mpv17l protects against mitochondrial oxidative stress and apoptosis by activation of Omi/HtrA2 protease , 2008, Proceedings of the National Academy of Sciences.

[26]  R. Escalante,et al.  Vacuole membrane protein 1 is an endoplasmic reticulum protein required for organelle biogenesis, protein secretion, and development. , 2008, Molecular biology of the cell.

[27]  T. Wurdinger,et al.  MicroRNA 21 Promotes Glioma Invasion by Targeting Matrix Metalloproteinase Regulators , 2008, Molecular and Cellular Biology.

[28]  Joseph V Bonventre,et al.  Kidney injury molecule-1 is a phosphatidylserine receptor that confers a phagocytic phenotype on epithelial cells. , 2008, The Journal of clinical investigation.

[29]  J. Iovanna,et al.  A novel mammalian trans-membrane protein reveals an alternative initiation pathway for autophagy , 2008, Autophagy.

[30]  J. Steitz,et al.  Switching from Repression to Activation: MicroRNAs Can Up-Regulate Translation , 2007, Science.

[31]  M. Noda,et al.  Recklessness as a hallmark of aggressive cancer , 2007, Cancer science.

[32]  A. Poustka,et al.  Reduced expression of vacuole membrane protein 1 affects the invasion capacity of tumor cells , 2007, Oncogene.

[33]  A. Levin,et al.  Pharmacokinetic/Pharmacodynamic Properties ofPhosphorothioate 2'-O-(2-Methoxyethyl)-ModifiedAntisense Oligonucleotides in Animals and Man , 2007 .

[34]  Xiaoxia Qi,et al.  Control of Stress-Dependent Cardiac Growth and Gene Expression by a MicroRNA , 2007, Science.

[35]  Michael Schrader,et al.  Peroxisomes and oxidative stress. , 2006, Biochimica et biophysica acta.

[36]  R. Iida,et al.  Human Mpv17-like protein is localized in peroxisomes and regulates expression of antioxidant enzymes. , 2006, Biochemical and biophysical research communications.

[37]  Sarah Calvo,et al.  MPV17 encodes an inner mitochondrial membrane protein and is mutated in infantile hepatic mitochondrial DNA depletion , 2006, Nature Genetics.

[38]  Z. Werb,et al.  Stage-Specific Action of Matrix Metalloproteinases Influences Progressive Hereditary Kidney Disease , 2006, PLoS medicine.

[39]  Philippe Lefebvre,et al.  Sorting out the roles of PPARα in energy metabolism and vascular homeostasis , 2006 .

[40]  A. Eddy Progression in chronic kidney disease. , 2005, Advances in chronic kidney disease.

[41]  D. Portilla,et al.  Anti-inflammatory effect of fibrate protects from cisplatin-induced ARF. , 2005, American journal of physiology. Renal physiology.

[42]  J. Holloszy,et al.  A potential link between muscle peroxisome proliferator- activated receptor-alpha signaling and obesity-related diabetes. , 2005, Cell metabolism.

[43]  D. Liang,et al.  Molecular profiling of diabetic mouse kidney reveals novel genes linked to glomerular disease. , 2004, Diabetes.

[44]  D. Portilla Energy metabolism and cytotoxicity. , 2003, Seminars in nephrology.

[45]  David B. Alexander,et al.  The Membrane-Anchored MMP Inhibitor RECK Is a Key Regulator of Extracellular Matrix Integrity and Angiogenesis , 2001, Cell.

[46]  R. Tomasini,et al.  Cloning and expression of the rat vacuole membrane protein 1 (VMP1), a new gene activated in pancreas with acute pancreatitis, which promotes vacuole formation. , 2000, Biochemical and biophysical research communications.

[47]  D. Kerjaschki,et al.  Glomerular overproduction of oxygen radicals in Mpv17 gene-inactivated mice causes podocyte foot process flattening and proteinuria: A model of steroid-resistant nephrosis sensitive to radical scavenger therapy. , 1999, The American journal of pathology.

[48]  T. Pineau,et al.  Targeted disruption of the alpha isoform of the peroxisome proliferator-activated receptor gene in mice results in abolishment of the pleiotropic effects of peroxisome proliferators , 1995, Molecular and cellular biology.

[49]  F. Wieland,et al.  Membrane topology of the 22 kDa integral peroxisomal membrane protein , 1993, FEBS letters.

[50]  R. Jaenisch,et al.  Transgenic mouse model of kidney disease: Insertional inactivation of ubiquitously expressed gene leads to nephrotic syndrome , 1990, Cell.

[51]  Dhiren P. Shah,et al.  ON OXIDATIVE STRESS AND DIABETIC COMPLICATIONS , 2013 .

[52]  A. McMahon,et al.  Fate tracing reveals the pericyte and not epithelial origin of myofibroblasts in kidney fibrosis. , 2010, The American journal of pathology.

[53]  Tsung-Cheng Chang,et al.  c-Myc suppression of miR-23 enhances mitochondrial glutaminase and glutamine metabolism , 2009, Nature.

[54]  J. Twisk,et al.  Randomized placebo-controlled trial assessing a treatment strategy consisting of pravastatin, vitamin E, and homocysteine lowering on plasma asymmetric dimethylarginine concentration in mild to moderate CKD. , 2009, American journal of kidney diseases : the official journal of the National Kidney Foundation.

[55]  Brad T. Sherman,et al.  Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources , 2008, Nature Protocols.

[56]  B. Staels,et al.  Sorting out the roles of PPAR alpha in energy metabolism and vascular homeostasis. , 2006, The Journal of clinical investigation.

[57]  M. Lupher,et al.  Regulation of fibrosis by the immune system. , 2006, Advances in immunology.

[58]  R. Iida,et al.  A novel alternative spliced Mpv17-like protein isoform localizes in cytosol and is expressed in a kidney- and adult-specific manner. , 2005, Experimental cell research.

[59]  A. Levin,et al.  Distribution and excretion of a phosphorothioate oligonucleotide in rats with experimentally induced renal injury. , 2004, Oligonucleotides.