Impact of horizontal gene transfer on emergence and stability of cooperative virulence in Salmonella Typhimurium

[1]  A. Griffin,et al.  Plasmids do not consistently stabilize cooperation across bacteria but may promote broad pathogen host-range , 2021, Nature Ecology & Evolution.

[2]  T. Emonet,et al.  A Primed Subpopulation of Bacteria Enables Rapid Expression of the Type 3 Secretion System in Pseudomonas aeruginosa , 2021, mBio.

[3]  A. Aertsen,et al.  The expression of virulence increases outer-membrane permeability and sensitivity to envelope stress in Salmonella Typhimurium , 2021, bioRxiv.

[4]  S. Bonhoeffer,et al.  Pathogen invasion-dependent tissue reservoirs and plasmid-encoded antibiotic degradation boost plasmid spread in the gut , 2021, bioRxiv.

[5]  A. Griffin,et al.  Ten recent insights for our understanding of cooperation , 2021, Nature Ecology & Evolution.

[6]  R. Kingsley,et al.  Mutation of hilD in a Salmonella Derby lineage linked to swine adaptation and reduced risk to human health , 2020, Scientific Reports.

[7]  J. Casadesús,et al.  Contribution of DNA adenine methylation to gene expression heterogeneity in Salmonella enterica , 2020, Nucleic acids research.

[8]  W. Hardt,et al.  How Food Affects Colonization Resistance Against Enteropathogenic Bacteria. , 2020, Annual review of microbiology.

[9]  W. Hardt,et al.  Evolutionary causes and consequences of bacterial antibiotic persistence , 2020, Nature Reviews Microbiology.

[10]  J. L. Cherry.  Selection-Driven Gene Inactivation in Salmonella. , 2020, Genome biology and evolution.

[11]  P. Rainey,et al.  Ecological scaffolding and the evolution of individuality , 2020, Nature Ecology & Evolution.

[12]  U. Sauer,et al.  Escherichia coli limits Salmonella Typhimurium infections after diet-shifts and fat-mediated microbiota perturbation in mice , 2019, Nature Microbiology.

[13]  S. Bonhoeffer,et al.  Salmonella persisters promote the spread of antibiotic resistance plasmids in the gut , 2019, Nature.

[14]  Diego Marcos Gonzalez,et al.  Bacteria Use Collective Behavior to Generate Diverse Combat Strategies , 2018, Current Biology.

[15]  Erik Bakkeren,et al.  Detection of Mutations Affecting Heterogeneously Expressed Phenotypes by Colony Immunoblot and Dedicated Semi-Automated Image Analysis Pipeline , 2017, Front. Microbiol..

[16]  Médéric Diard,et al.  Evolution of bacterial virulence. , 2017, FEMS microbiology reviews.

[17]  W. Hardt,et al.  Salmonella Typhimurium Diarrhea Reveals Basic Principles of Enteropathogen Infection and Disease-Promoted DNA Exchange. , 2017, Cell host & microbe.

[18]  R. Stocker,et al.  High-avidity IgA protects the intestine by enchaining growing bacteria , 2017, Nature.

[19]  A. Aertsen,et al.  Inflammation boosts bacteriophage transfer between Salmonella spp. , 2017, Science.

[20]  Irine Ronin,et al.  A long-term epigenetic memory switch controls bacterial virulence bimodality , 2017, eLife.

[21]  Anne M. Stringer,et al.  Mapping the Regulatory Network for Salmonella enterica Serovar Typhimurium Invasion , 2016, mBio.

[22]  K. Hokamp,et al.  The Impact of 18 Ancestral and Horizontally-Acquired Regulatory Proteins upon the Transcriptome and sRNA Landscape of Salmonella enterica serovar Typhimurium , 2016, PLoS genetics.

[23]  Knut Drescher,et al.  Spatial structure, cooperation and competition in biofilms , 2016, Nature Reviews Microbiology.

[24]  S. Porwollik,et al.  Persistent Infections by Nontyphoidal Salmonella in Humans: Epidemiology and Genetics. , 2016, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[25]  P. Dersch,et al.  Regulatory principles governing Salmonella and Yersinia virulence , 2015, Front. Microbiol..

[26]  B. Raymond,et al.  Making pathogens sociable: The emergence of high relatedness through limited host invasibility , 2015, The ISME Journal.

[27]  W. Hardt,et al.  Antibiotic Treatment Selects for Cooperative Virulence of Salmonella Typhimurium , 2014, Current Biology.

[28]  François Taddei,et al.  Genetic information transfer promotes cooperation in bacteria , 2014, Proceedings of the National Academy of Sciences.

[29]  B. Kazmierczak,et al.  Cheating by type 3 secretion system-negative Pseudomonas aeruginosa during pulmonary infection , 2014, Proceedings of the National Academy of Sciences.

[30]  Stephen P. Diggle,et al.  Targeting virulence: can we make evolution-proof drugs? , 2014, Nature Reviews Microbiology.

[31]  K. Hokamp,et al.  An infection-relevant transcriptomic compendium for Salmonella enterica Serovar Typhimurium. , 2013, Cell host & microbe.

[32]  Sam P. Brown,et al.  The interplay between relatedness and horizontal gene transfer drives the evolution of plasmid-carried public goods , 2013, Proceedings of the Royal Society B: Biological Sciences.

[33]  Roland R. Regoes,et al.  Stabilization of cooperative virulence by the expression of an avirulent phenotype , 2013, Nature.

[34]  N. Gough.  Bacterial Cooperation , 2012, Science Signaling.

[35]  T. Nogueira,et al.  Rapid Evolution of the Sequences and Gene Repertoires of Secreted Proteins in Bacteria , 2012, PloS one.

[36]  B. Keller.  Epidemiology and Genetics , 2012 .

[37]  Erwin Frey,et al.  Growth dynamics and the evolution of cooperation in microbial populations , 2012, Scientific Reports.

[38]  Wolf-Dietrich Hardt,et al.  Gut inflammation can boost horizontal gene transfer between pathogenic and commensal Enterobacteriaceae , 2012, Proceedings of the National Academy of Sciences.

[39]  Matthias Heinemann,et al.  The Cost of Virulence: Retarded Growth of Salmonella Typhimurium Cells Expressing Type III Secretion System 1 , 2011, PLoS pathogens.

[40]  Sam P. Brown,et al.  Horizontal Gene Transfer and The Evolution of Bacterial Cooperation , 2011, Evolution; international journal of organic evolution.

[41]  J. Sirard,et al.  The Microbiota Mediates Pathogen Clearance from the Gut Lumen after Non-Typhoidal Salmonella Diarrhea , 2010, PLoS pathogens.

[42]  H. Ochman,et al.  Short-Term Signatures of Evolutionary Change in the Salmonella enterica Serovar Typhimurium 14028 Genome , 2009, Journal of bacteriology.

[43]  Sam P. Brown,et al.  Horizontal Gene Transfer of the Secretome Drives the Evolution of Bacterial Cooperation and Virulence , 2009, Current Biology.

[44]  J. Glenn Morris,et al.  Cholera transmission: the host, pathogen and bacteriophage dynamic , 2009, Nature Reviews Microbiology.

[45]  Michael Doebeli,et al.  A simple and general explanation for the evolution of altruism , 2009, Proceedings of the Royal Society B: Biological Sciences.

[46]  Wolf-Dietrich Hardt,et al.  Self-destructive cooperation mediated by phenotypic noise , 2008, Nature.

[47]  Fernando de la Cruz,et al.  Why is entry exclusion an essential feature of conjugative plasmids? , 2008, Plasmid.

[48]  D. Relman,et al.  Host Transmission of Salmonella enterica Serovar Typhimurium Is Controlled by Virulence Factors and Indigenous Intestinal Microbiota , 2007, Infection and Immunity.

[49]  G. Dougan,et al.  Salmonella enterica Serovar Typhimurium Exploits Inflammation to Compete with the Intestinal Microbiota , 2007, PLoS biology.

[50]  A. Griffin,et al.  Social evolution theory for microorganisms , 2006, Nature Reviews Microbiology.

[51]  A. Buckling,et al.  Cooperation and virulence in acute Pseudomonas aeruginosa infections , 2006, BMC Biology.

[52]  B. Finlay,et al.  Analysis of the Contribution of Salmonella Pathogenicity Islands 1 and 2 to Enteric Disease Progression Using a Novel Bovine Ileal Loop Model and a Murine Model of Infectious Enterocolitis , 2005, Infection and Immunity.

[53]  Kevin R Foster,et al.  Hamiltonian Medicine: Why the Social Lives of Pathogens Matter , 2005, Science.

[54]  S. Akira,et al.  The Salmonella Pathogenicity Island (SPI)-2 and SPI-1 Type III Secretion Systems Allow Salmonella Serovar typhimurium to Trigger Colitis via MyD88-Dependent and MyD88-Independent Mechanisms1 , 2005, The Journal of Immunology.

[55]  K. Foster,et al.  Pleiotropy as a mechanism to stabilize cooperation , 2004, Nature.

[56]  A. Griffin,et al.  Cooperation and competition in pathogenic bacteria , 2004, Nature.

[57]  M. Hogardt,et al.  Pretreatment of Mice with Streptomycin Provides a Salmonella enterica Serovar Typhimurium Colitis Model That Allows Analysis of Both Pathogen and Host , 2003, Infection and Immunity.

[58]  Jie Dong,et al.  Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157. , 2002, Nucleic acids research.

[59]  B. Crespi.  The evolution of social behavior in microorganisms. , 2001, Trends in ecology & evolution.

[60]  Jeff Smith.  The social evolution of bacterial pathogenesis , 2001, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[61]  B. Wanner,et al.  One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[62]  G. Cornelis,et al.  The Virulence Plasmid of Yersinia, an Antihost Genome , 1998, Microbiology and Molecular Biology Reviews.

[63]  J. Shea,et al.  Simultaneous identification of bacterial virulence genes by negative selection. , 1995, Science.

[64]  M A Nowak,et al.  Intra-host versus inter-host selection: viral strategies of immune function impairment. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[65]  V. de Lorenzo,et al.  Transposon vectors containing non-antibiotic resistance selection markers for cloning and stable chromosomal insertion of foreign genes in gram-negative bacteria , 1990, Journal of bacteriology.

[66]  L. Chao,et al.  Structured habitats and the evolution of anticompetitor toxins in bacteria. , 1981, Proceedings of the National Academy of Sciences of the United States of America.

[67]  B. Stocker,et al.  Aromatic-dependent Salmonella typhimurium are non-virulent and effective as live vaccines , 1981, Nature.

[68]  W. Hamilton.  The genetical evolution of social behaviour. I. , 1964, Journal of theoretical biology.

[69]  W. Hamilton.  The genetical evolution of social behaviour. II. , 1964, Journal of theoretical biology.

[70]  N. Sternberg,et al.  Bacteriophage-mediated generalized transduction in Escherichia coli and Salmonella typhimurium. , 1991, Methods in enzymology.