Getting In or Out: Early Segregation Between Importers and Exporters in the Evolution of ATP-Binding Cassette (ABC) Transporters

[1]  K. Novak.  The complete genome sequence… , 1998, Nature Medicine.

[2]  T. Omata,et al.  Involvement of the C-terminal Domain of an ATP-binding Subunit in the Regulation of the ABC-type Nitrate/Nitrite Transporter of the Cyanobacterium Synechococcus sp. Strain PCC 7942* , 1997, The Journal of Biological Chemistry.

[3]  D. Valle,et al.  Identification of a fourth half ABC transporter in the human peroxisomal membrane. , 1997, Human molecular genetics.

[4]  N. W. Davis,et al.  The complete genome sequence of Escherichia coli K-12. , 1997, Science.

[5]  L. Thöny‐meyer.  Biogenesis of respiratory cytochromes in bacteria , 1997, Microbiology and molecular biology reviews : MMBR.

[6]  Michael Y. Galperin,et al.  Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea , 1997, Molecular microbiology.

[7]  D. Keppler,et al.  Transport of glutathione conjugates and glucuronides by the multidrug resistance proteins MRP1 and MRP2. , 1997, Biological chemistry.

[8]  M. Hofnung,et al.  Subunit interactions in ABC transporters: a conserved sequence in hydrophobic membrane proteins of periplasmic permeases defines an important site of interaction with the ATPase subunits , 1997, The EMBO journal.

[9]  R. Worobo,et al.  Double‐glycine‐type leader peptides direct secretion of bacteriocins by ABC transporters: colicin V secretion in Lactococcus lactis , 1997, Molecular microbiology.

[10]  J. Claverys,et al.  The adc locus, which affects competence for genetic transformation in Streptococcus pneumoniae, encodes an ABC transporter with a putative lipoprotein homologous to a family of streptococcal adhesins. , 1997, Research in microbiology.

[11]  André Goffeau,et al.  Complete inventory of the yeast ABC proteins , 1997, Nature Genetics.

[12]  B. Goldman,et al.  Use of heme reporters for studies of cytochrome biosynthesis and heme transport , 1996, Journal of bacteriology.

[13]  E. Schneider,et al.  A putative helical domain in the MalK subunit of the ATP‐binding‐cassette transport system for maltose of Salmonella typhimurium (MalFGK2) is crucial for interaction with MalF and MalG. A study using the LacK protein of Agrobacterium radiobacter as a tool. , 1996, Molecular microbiology.

[14]  I. Singh,et al.  Topology of ATP-binding domain of adrenoleukodystrophy gene product in peroxisomes. , 1996, Archives of biochemistry and biophysics.

[15]  D. Valle,et al.  A Saccharomyces cerevisiae homolog of the human adrenoleukodystrophy transporter is a heterodimer of two half ATP-binding cassette transporters. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[16]  K. Kuchler,et al.  The ATP Binding Cassette Transporters Pdr5 and Snq2 of Saccharomyces cerevisiae Can Mediate Transport of Steroids in Vivo* , 1996, The Journal of Biological Chemistry.

[17]  O. Santana,et al.  The role of the nodI and nodJ genes in the transport of Nod metabolites in Rhizobium etli. , 1996, Gene.

[18]  H. Santos,et al.  High-affinity maltose/trehalose transport system in the hyperthermophilic archaeon Thermococcus litoralis , 1996, Journal of bacteriology.

[19]  C. Rodrigues-Pousada,et al.  The ABC transporter proteins Pat1 and Pat2 are required for import of long‐chain fatty acids into peroxisomes of Saccharomyces cerevisiae. , 1996, The EMBO journal.

[20]  G. Deléage,et al.  Recombinant N-terminal Nucleotide-binding Domain from Mouse P-glycoprotein , 1996, The Journal of Biological Chemistry.

[21]  W. Köster,et al.  Conserved amino acids in the N‐ and C‐terminal domains of integral membrane transporter FhuB define sites important for intra‐ and intermolecular interactions , 1996, Molecular microbiology.

[22]  J. Mandel,et al.  A close relative of the adrenoleukodystrophy (ALD) gene codes for a peroxisomal protein with a specific expression pattern. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[23]  H. Spaink,et al.  Rhizobium NodI and NodJ proteins play a role in the efficiency of secretion of lipochitin oligosaccharides , 1995, Journal of bacteriology.

[24]  W. M. Vos,et al.  Maturation pathway of nisin and other lantibiotics: post‐translationally modified antimicrobial peptides exported by Gram‐positive bacteria , 1995, Molecular microbiology.

[25]  D. Gross,et al.  Analysis of the syrB and syrC genes of Pseudomonas syringae pv. syringae indicates that syringomycin is synthesized by a thiotemplate mechanism , 1995, Journal of bacteriology.

[26]  T. Trust,et al.  Endogenous mutagenesis by an insertion sequence element identifies Aeromonas salmonicida AbcA as an ATP-binding cassette transport protein required for biogenesis of smooth lipopolysaccharide. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[27]  H. Tsunekawa,et al.  Nucleotide sequence analysis of the carbomycin biosynthetic genes including the 3-O-acyltransferase gene from Streptomyces thermotolerans. , 1995, Bioscience, biotechnology, and biochemistry.

[28]  D. Diep,et al.  A family of bacteriocin ABC transporters carry out proteolytic processing of their substrates concomitant with export , 1995, Molecular microbiology.

[29]  Lixin Zhou,et al.  Competence for genetic transformation in Streptococcus pneumoniae: organization of a regulatory locus with homology to two lactococcin A secretion genes. , 1995, Gene.

[30]  T. Merriman,et al.  Nucleotide sequence of pvdD, a pyoverdine biosynthetic gene from Pseudomonas aeruginosa: PvdD has similarity to peptide synthetases , 1995, Journal of bacteriology.

[31]  J. Thompson,et al.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.

[32]  A. Hughes,et al.  Evolution of the ATP-binding-cassette transmembrane transporters of vertebrates. , 1994, Molecular biology and evolution.

[33]  P. Kolenbrander,et al.  Nucleotide sequence of the Streptococcus gordonii PK488 coaggregation adhesin gene, scaA, and ATP-binding cassette , 1994, Infection and immunity.

[34]  A. Cowman,et al.  Plasmodium falciparum: the pfmdr2 protein is not overexpressed in chloroquine-resistant isolates of the malaria parasite. , 1994, Experimental parasitology.

[35]  P. Gros,et al.  Phosphatidylcholine translocase: A physiological role for the mdr2 gene , 1994, Cell.

[36]  P. Pedersen,et al.  The cystic fibrosis transmembrane conductance regulator. Nucleotide binding to a synthetic peptide segment from the second predicted nucleotide binding fold. , 1994, The Journal of biological chemistry.

[37]  R. Tampé,et al.  Nucleotide binding to the hydrophilic C-terminal domain of the transporter associated with antigen processing (TAP). , 1994, The Journal of biological chemistry.

[38]  G. Cox,et al.  Mutational analysis of the traffic ATPase (ABC) transporters involved in uptake of eye pigment precursors in Drosophila melanogaster. Implications for structure-function relationships. , 1994, The Journal of biological chemistry.

[39]  M. Saier,et al.  Computer-aided analyses of transport protein sequences: gleaning evidence concerning function, structure, biogenesis, and evolution , 1994, Microbiological reviews.

[40]  W. Saurin,et al.  Sequence relationships between integral inner membrane proteins of binding protein‐dependent transport systems: Evolution by recurrent gene duplications , 1994, Protein science : a publication of the Protein Society.

[41]  D. Court,et al.  Cloning and organization of the abc and mdl genes of Escherichia coli: relationship to eukaryotic multidrug resistance. , 1993, Gene.

[42]  R. Kolter,et al.  ABC transporters: bacterial exporters , 1993, Microbiological reviews.

[43]  C. Panagiotidis,et al.  Tinkering with transporters: Periplasmic binding protein-dependent maltose transport inE. coli , 1993, Journal of bioenergetics and biomembranes.

[44]  H. A. Berger,et al.  Regulation of the cystic fibrosis transmembrane conductance regulator Cl- channel by negative charge in the R domain. , 1993, The Journal of biological chemistry.

[45]  E. Schneider,et al.  The ATP-binding cassette (ABC) transporter for maltose/maltodextrins of Salmonella typhimurium. Characterization of the ATPase activity associated with the purified MalK subunit. , 1993, The Journal of biological chemistry.

[46]  S. Thiagalingam,et al.  The multiple roles for ATP in the Escherichia coli UvrABC endonuclease-catalyzed incision reaction. , 1993, The Journal of biological chemistry.

[47]  M H Saier,et al.  Structural, functional, and evolutionary relationships among extracellular solute-binding receptors of bacteria , 1993, Microbiological reviews.

[48]  C. Méndez,et al.  Streptomyces antibioticus contains at least three oleandomycin‐resistance determinants, one of which shows similarity with proteins of the ABC‐transporter superfamily , 1993, Molecular microbiology.

[49]  Jean Mosser,et al.  Putative X-linked adrenoleukodystrophy gene shares unexpected homology with ABC transporters , 1993, Nature.

[50]  H. A. Berger,et al.  Regulation of the cystic fibrosis transmembrane conductance regulator Cl- channel by specific protein kinases and protein phosphatases. , 1993, The Journal of biological chemistry.

[51]  C. Georgopoulos,et al.  The essential Escherichia coli msbA gene, a multicopy suppressor of null mutations in the htrB gene, is related to the universally conserved family of ATP‐dependent translocators , 1993, Molecular microbiology.

[52]  A. Duncan,et al.  Overexpression of a transporter gene in a multidrug-resistant human lung cancer cell line. , 1992, Science.

[53]  M H Saier,et al.  A new subfamily of bacterial ABC‐type transport systems catalyzing export of drugs and carbohydrates , 1992, Protein science : a publication of the Protein Society.

[54]  G Scheel,et al.  Heavy metal tolerance in the fission yeast requires an ATP‐binding cassette‐type vacuolar membrane transporter. , 1992, The EMBO journal.

[55]  N. Solh,et al.  Sequence of a staphylococcal plasmid gene, vga, encoding a putative ATP-binding protein involved in resistance to virginiamycin A-like antibiotics. , 1992, Gene.

[56]  Rajesh P. N. Rao,et al.  Characterization of a novel regulatory gene governing the expression of a polyketide synthase gene in Streptomyces ambofaciens , 1992, Molecular microbiology.

[57]  Rainer Fuchs,et al.  CLUSTAL V: improved software for multiple sequence alignment , 1992, Comput. Appl. Biosci..

[58]  K. Ueda,et al.  P-glycoprotein. ATP hydrolysis by the N-terminal nucleotide-binding domain. , 1992, The Journal of biological chemistry.

[59]  T. Elliott,et al.  Assembly and function of the two ABC transporter proteins encoded in the human major histocompatibility complex , 1992, Nature.

[60]  K. Kamijo,et al.  Nucleotide sequence of the human 70 kDa peroxisomal membrane protein: a member of ATP-binding cassette transporters. , 1992, Biochimica et biophysica acta.

[61]  D. Trawick,et al.  Bacterial cytochromes c biogenesis. , 1992, Genes & development.

[62]  C. Hutchinson,et al.  A bacterial analog of the mdr gene of mammalian tumor cells is present in Streptomyces peucetius, the producer of daunorubicin and doxorubicin. , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[63]  P. Delepelaire,et al.  Characterization, localization and transmembrane organization of the three proteins PrtD, PrtE and PrtF necessary for protease secretion by the Gram‐negative bacterium Erwinia chrysanthemi , 1991, Molecular microbiology.

[64]  J. Stanley,et al.  Molecular analysis of an essential gene upstream of rpoN in Rhizobium NGR234. , 1991, FEMS microbiology letters.

[65]  P. Rosteck,et al.  Homology between proteins controlling Streptomyces fradiae tylosin resistance and ATP-binding transport. , 1991, Gene.

[66]  K. Bousset,et al.  Evidence for a common molecular origin of the capsule gene loci in Gram‐negative bacteria expressing group II capsular polysaccharides , 1991, Molecular microbiology.

[67]  C. Wandersman,et al.  The secretion genes of Pseudomonas aeruginosa alkaline protease are functionally related to those of Erwinia chrysanthemi proteases and Escherichia coliα‐haemolysin , 1991, Molecular microbiology.

[68]  S. Beck,et al.  Sequences encoded in the class II region of the MHC related to the 'ABC' superfamily of transporters , 1990, Nature.

[69]  E. Myers,et al.  Basic local alignment search tool. , 1990, Journal of molecular biology.

[70]  B. Didomenico,et al.  Protein synthesis in yeast. Structural and functional analysis of the gene encoding elongation factor 3. , 1990, The Journal of biological chemistry.

[71]  G. Ames,et al.  Bacterial periplasmic permeases belong to a family of transport proteins operating from Escherichia coli to human: Traffic ATPases. , 1990, FEMS microbiology reviews.

[72]  J. Wootton,et al.  Inducible erythromycin resistance in staphlyococci is encoded by a member of the ATP‐binding transport super‐gene family , 1990, Molecular microbiology.

[73]  D. Holland,et al.  Identification and characterization of hetA, a gene that acts early in the process of morphological differentiation of heterocysts , 1990, Journal of bacteriology.

[74]  S. Létoffé,et al.  Protease secretion by Erwinia chrysanthemi: the specific secretion functions are analogous to those of Escherichia coli alpha‐haemolysin. , 1990, The EMBO journal.

[75]  M. Ouellette,et al.  The amplified H circle of methotrexate‐resistant leishmania tarentolae contains a novel P‐glycoprotein gene. , 1990, The EMBO journal.

[76]  L. M. Albright,et al.  Identification of a gene linked to Rhizobium meliloti ntrA whose product is homologous to a family to ATP-binding proteins , 1989, Journal of bacteriology.

[77]  J. Leigh,et al.  Role for [corrected] Agrobacterium tumefaciens ChvA protein in export of beta-1,2-glucan , 1989, Journal of bacteriology.

[78]  G. Ditta,et al.  The ndvA gene product of Rhizobium meliloti is required for beta-(1----2)glucan production and has homology to the ATP-binding export protein HlyB , 1988, Journal of bacteriology.

[79]  M P Gallagher,et al.  A family of closely related ATP‐binding subunits from prokaryotic and eukaryotic cells , 1988, BioEssays : news and reviews in molecular, cellular and developmental biology.

[80]  N. Saitou,et al.  The neighbor-joining method: a new method for reconstructing phylogenetic trees. , 1987, Molecular biology and evolution.

[81]  D. Housman,et al.  Mammalian multidrug resistance gene: Complete cDNA sequence indicates strong homology to bacterial transport proteins , 1986, Cell.

[82]  Michael M. Gottesman,et al.  Internal duplication and homology with bacterial transport proteins in the mdr1 (P-glycoprotein) gene from multidrug-resistant human cells , 1986, Cell.

[83]  R. Doolittle,et al.  Domainal evolution of a prokaryotic DNA repair protein and its relationship to active-transport proteins , 1986, Nature.

[84]  R. Welch,et al.  Nucleotide sequence of an Escherichia coli chromosomal hemolysin , 1985, Journal of bacteriology.

[85]  J. Felsenstein.  CONFIDENCE LIMITS ON PHYLOGENIES: AN APPROACH USING THE BOOTSTRAP , 1985, Evolution; international journal of organic evolution.

[86]  C. Higgins,et al.  Nucleotide binding by membrane components of bacterial periplasmic binding protein‐dependent transport systems. , 1985, The EMBO journal.

[87]  J. Walker,et al.  Distantly related sequences in the alpha‐ and beta‐subunits of ATP synthase, myosin, kinases and other ATP‐requiring enzymes and a common nucleotide binding fold. , 1982, The EMBO journal.

[88]  P. Guilfoile,et al.  Expression and Characterization of DrrA and DrrB Proteins of Streptomyces peucetius in Escherichia coli : DrrA Is an ATP Binding Protein , 1997 .

[89]  E. Conway de Macario,et al.  ABC transporters in Archaea: two genes encoding homologs of the nucleotide-binding components in the methanogen Methanosarcina mazei S-6. , 1996, Gene.

[90]  M. Hofnung,et al.  Phylogenetic analyses of the ATP-binding constituents of bacterial extracytoplasmic receptor-dependent ABC-type nutrient uptake permeases. , 1995, Research in microbiology.

[91]  G. Cox,et al.  Cytochrome bd biosynthesis in Escherichia coli: the sequences of the cydC and cydD genes suggest that they encode the components of an ABC membrane transporter. , 1993, Molecular microbiology.

[92]  W. Pearson.  Rapid and sensitive sequence comparison with FASTP and FASTA. , 1990, Methods in enzymology.

[93]  G. Weinstock,et al.  DNA sequence of the Pasteurella haemolytica leukotoxin gene cluster. , 1989, DNA.

[94]  L. Tsui,et al.  Identification of the cystic fibrosis gene: cloning and characterization of complementary DNA. , 1989, Science.