Molecular Networking Revealed Unique UV-Absorbing Phospholipids: Favilipids from the Marine Sponge Clathria faviformis

Analysis of extracts of the marine sponge Clathria faviformis by high-resolution LC-MS2 and molecular networking resulted in the discovery of a new family of potentially UV-protecting phospholipids, the favilipids. One of them, favilipid A (1), was isolated and its structure determined by mass and tandem mass spectrometry, NMR, electronic circular dichroism (ECD), and computational studies. Favilipid A, which has no close analogues among natural products, possesses an unprecedented structure characterized by a 4-aminodihydropiridinium core, resulting in UV-absorbing properties that are very unusual for a phospholipid. Consequently, favilipid A could inspire the development of a new class of molecules to be used as sunscreen ingredients. In addition, favilipid A inhibited by 58–48% three kinases (JAK3, IKKβ, and SYK) involved in the regulation of the immune system, suggesting a potential use for treatment of autoimmune diseases, hematologic cancers, and other inflammatory states.

[1]  A. Carroll,et al.  Marine natural products. , 2022, Natural product reports.

[2]  Yousong Ding,et al.  Biosynthesis and Heterologous Production of Mycosporine-Like Amino Acid Palythines. , 2021, The Journal of organic chemistry.

[3]  F. Hsu Electrospray ionization with higher-energy collision dissociation tandem mass spectrometry toward characterization of ceramides as [M + Li]+ ions: Mechanisms of fragmentation and structural identification. , 2021, Analytica chimica acta.

[4]  R. Teta,et al.  New Tricks with an Old Sponge: Feature-Based Molecular Networking Led to Fast Identification of New Stylissamide L from Stylissa caribica , 2020, Marine drugs.

[5]  Robert A. Keyzers,et al.  Marine natural products. , 2020, Natural product reports.

[6]  T. Kovács,et al.  Challenges of unculturable bacteria: environmental perspectives , 2020, Reviews in Environmental Science and Bio/Technology.

[7]  A. Hensel,et al.  Absolute Configuration of Mycosporine-Like Amino Acids, Their Wound Healing Properties and In Vitro Anti-Aging Effects , 2019, Marine drugs.

[8]  Simon Rogers,et al.  Feature-Based Molecular Networking in the GNPS Analysis Environment , 2019, Nature Methods.

[9]  Alfonso Mangoni,et al.  Computational prediction of chiroptical properties in structure elucidation of natural products. , 2019, Natural product reports.

[10]  Roberta Teta,et al.  A joint molecular networking study of a Smenospongia sponge and a cyanobacterial bloom revealed new antiproliferative chlorinated polyketides. , 2019, Organic chemistry frontiers : an international journal of organic chemistry.

[11]  Marc Litaudon,et al.  MetGem Software for the Generation of Molecular Networks Based on the t-SNE Algorithm. , 2018, Analytical chemistry.

[12]  Yu Kang,et al.  Cheminformatic Insight into the Differences between Terrestrial and Marine Originated Natural Products , 2018, J. Chem. Inf. Model..

[13]  Sheng-yong Yang,et al.  Discovery of a highly selective JAK3 inhibitor for the treatment of rheumatoid arthritis , 2018, Scientific Reports.

[14]  H. Shindy Fundamentals in the chemistry of cyanine dyes: A review , 2017 .

[15]  Marc Litaudon,et al.  MZmine 2 Data-Preprocessing To Enhance Molecular Networking Reliability. , 2017, Analytical chemistry.

[16]  Kristian Fog Nielsen,et al.  Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking , 2016, Nature Biotechnology.

[17]  R. Geahlen,et al.  Getting Syk: spleen tyrosine kinase as a therapeutic target. , 2014, Trends in pharmacological sciences.

[18]  J. R. Peterson,et al.  The Human Kinome and Kinase Inhibition , 2013, Current protocols in pharmacology.

[19]  Natalie I. Tasman,et al.  A Cross-platform Toolkit for Mass Spectrometry and Proteomics , 2012, Nature Biotechnology.

[20]  I. Verma,et al.  IKK biology , 2012, Immunological reviews.

[21]  T. Molinski,et al.  NMR quantitation of natural products at the nanomole scale. , 2009, Journal of natural products.

[22]  F. Neese,et al.  Double-hybrid density functional theory for excited electronic states of molecules. , 2007, The Journal of chemical physics.

[23]  R. Hoffman Structure Determination of Organic Compounds , 2005 .

[24]  B. Ortwerth,et al.  Structure Elucidation of a Novel Yellow Chromophore from Human Lens Protein* , 2004, Journal of Biological Chemistry.

[25]  P. Shannon,et al.  Cytoscape: a software environment for integrated models of biomolecular interaction networks. , 2003, Genome research.

[26]  A. Anderson,et al.  Dicyclopenta[ef,kl]heptalene (azupyrene) chemistry. Jutz synthesis byproducts. Synthesis and thermal isomerization of 1-methylazupyrene , 1986 .

[27]  Massimo Gadina,et al.  Type I/II cytokines, JAKs, and new strategies for treating autoimmune diseases , 2016, Nature Reviews Rheumatology.

[28]  D. Faulkner Marine natural products. , 2000, Natural product reports.

[29]  M. Whiting,et al.  756. Researches on polyenes. Part VII. The preparation and electronic absorption spectra of homologous series of simple cyanines, merocyanines, and oxonols , 1960 .