Synthetic glycans control gut microbiome structure and mitigate colitis in mice
暂无分享,去创建一个
Andrew C. Tolonen | P. Turnbaugh | E. Rapp | R. Kottler | G. von Maltzahn | Yves A. Millet | N. Beauchemin | J.W. Tan | Lingyao Li | Charlie Bayne | J. V. H. van Hylckama Vlieg | Nicholas Beauchemin | Jackson Lee | Brian M Meehan | J. Meisner | G. Leblanc | Chris Murphy | Christopher M Liu
[1] V. Fogliano,et al. Effect of bean structure on microbiota utilization of plant nutrients: An in-vitro study using the simulator of the human intestinal microbial ecosystem (SHIME®) , 2020 .
[2] Dan Knights,et al. BURST enables mathematically optimal short-read alignment for big data , 2020, bioRxiv.
[3] E. Kuijper,et al. The Bacterial Gut Microbiota of Adult Patients Infected, Colonized or Noncolonized by Clostridioides difficile , 2020, Microorganisms.
[4] M. Scholz,et al. Propionic Acid Shapes the Multiple Sclerosis Disease Course by an Immunomodulatory Mechanism , 2020, Cell.
[5] Y. Taur,et al. Compositional flux within the intestinal microbiota and risk for bloodstream infection with gram-negative bacteria. , 2020, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.
[6] B. Henrissat,et al. Interspecies Competition Impacts Targeted Manipulation of Human Gut Bacteria by Fiber-Derived Glycans , 2019, Cell.
[7] T. van de Wiele,et al. Propionate-Producing Consortium Restores Antibiotic-Induced Dysbiosis in a Dynamic in vitro Model of the Human Intestinal Microbial Ecosystem , 2019, Front. Microbiol..
[8] H. Sokol,et al. Prominence of ileal mucosa-associated microbiota to predict postoperative endoscopic recurrence in Crohn’s disease , 2019, Gut.
[9] A. K. Hansen,et al. Targeting gut microbiota and barrier function with prebiotics to alleviate autoimmune manifestations in NOD mice , 2019, Diabetologia.
[10] Thomas B. Clarke,et al. Microbial bile salt hydrolases mediate the efficacy of faecal microbiota transplant in the treatment of recurrent Clostridioides difficile infection , 2019, Gut.
[11] Yun-Jaie Choi,et al. Pullulan Nanoparticles as Prebiotics Enhance the Antibacterial Properties of Lactobacillus plantarum Through the Induction of Mild Stress in Probiotics , 2019, Front. Microbiol..
[12] Shuangjiang Liu,et al. Parabacteroides distasonis Alleviates Obesity and Metabolic Dysfunctions via Production of Succinate and Secondary Bile Acids. , 2019, Cell reports.
[13] T. Schmidt,et al. Dynamics of Human Gut Microbiota and Short-Chain Fatty Acids in Response to Dietary Interventions with Three Fermentable Fibers , 2018, mBio.
[14] A. Bäumler,et al. Colonocyte metabolism shapes the gut microbiota , 2018, Science.
[15] Richard Bonneau,et al. Translating microbiome futures , 2018, Nature Biotechnology.
[16] Zhenglu Yang,et al. dbCAN2: a meta server for automated carbohydrate-active enzyme annotation , 2018, Nucleic Acids Res..
[17] Rob Knight,et al. Evaluating the Information Content of Shallow Shotgun Metagenomics , 2018, mSystems.
[18] Chenhong Zhang,et al. Gut bacteria selectively promoted by dietary fibers alleviate type 2 diabetes , 2018, Science.
[19] Laurence Zitvogel,et al. Gut microbiome influences efficacy of PD-1–based immunotherapy against epithelial tumors , 2018, Science.
[20] T. Spector,et al. Gut microbiome diversity and high-fibre intake are related to lower long-term weight gain , 2017, International Journal of Obesity.
[21] T. Kanai,et al. A Single Species of Clostridium Subcluster XIVa Decreased in Ulcerative Colitis Patients , 2016, Inflammatory Bowel Diseases.
[22] Robert C. Edgar,et al. UNOISE2: improved error-correction for Illumina 16S and ITS amplicon sequencing , 2016, bioRxiv.
[23] M. Morgan. Current state of knowledge of hepatic encephalopathy (part III): non-absorbable disaccharides , 2016, Metabolic Brain Disease.
[24] Erdmann Rapp,et al. Towards personalized diagnostics via longitudinal study of the human plasma N-glycome. , 2016, Biochimica et biophysica acta.
[25] Eric A. Franzosa,et al. Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans , 2016, Cell.
[26] Paul J. McMurdie,et al. DADA2: High resolution sample inference from Illumina amplicon data , 2016, Nature Methods.
[27] Mohsen Mazidi,et al. Gut microbiome and metabolic syndrome. , 2016, Diabetes & metabolic syndrome.
[28] Makoto Fujii,et al. Reduced Abundance of Butyrate-Producing Bacteria Species in the Fecal Microbial Community in Crohn's Disease , 2016, Digestion.
[29] N. Segata,et al. Bifidobacteria exhibit social behavior through carbohydrate resource sharing in the gut , 2015, Scientific Reports.
[30] Chris McSweeney,et al. Association between specific mucosa‐associated microbiota in Crohn's disease at the time of resection and subsequent disease recurrence: A pilot study , 2015, Journal of gastroenterology and hepatology.
[31] Leo Lahti,et al. Fat, Fiber and Cancer Risk in African Americans and Rural Africans , 2015, Nature Communications.
[32] C. Borchers,et al. An isotope-labeled chemical derivatization method for the quantitation of short-chain fatty acids in human feces by liquid chromatography-tandem mass spectrometry. , 2015, Analytica chimica acta.
[33] Andrew C. Tolonen,et al. Functional Diversity of Carbohydrate-Active Enzymes Enabling a Bacterium to Ferment Plant Biomass , 2014, PLoS genetics.
[34] E. Pamer,et al. Enterococci and Their Interactions with the Intestinal Microbiome , 2014, Microbiology spectrum.
[35] J. Bajaj. The role of microbiota in hepatic encephalopathy , 2014, Gut microbes.
[36] Pedro M. Coutinho,et al. The carbohydrate-active enzymes database (CAZy) in 2013 , 2013, Nucleic Acids Res..
[37] A. Rudensky,et al. Metabolites produced by commensal bacteria promote peripheral regulatory T cell generation , 2013, Nature.
[38] Nayoung Kim,et al. Abdominal Bloating: Pathophysiology and Treatment , 2013, Journal of neurogastroenterology and motility.
[39] W. Garrett,et al. The Microbial Metabolites, Short-Chain Fatty Acids, Regulate Colonic Treg Cell Homeostasis , 2013, Science.
[40] Erdmann Rapp,et al. Development of a high‐throughput glycoanalysis method for the characterization of oligosaccharides in human milk utilizing multiplexed capillary gel electrophoresis with laser‐induced fluorescence detection , 2013, Electrophoresis.
[41] K. Rolston,et al. Intestinal colonisation and blood stream infections due to vancomycin-resistant enterococci (VRE) and extended-spectrum beta-lactamase-producing enterobacteriaceae (ESBLE) in patients with haematological and oncological malignancies , 2013, Infection.
[42] J. Lecerf,et al. Xylo-oligosaccharide (XOS) in combination with inulin modulates both the intestinal environment and immune status in healthy subjects, while XOS alone only shows prebiotic properties. , 2012, British Journal of Nutrition.
[43] M. Hallek,et al. Intestinal colonisation and blood stream infections due to vancomycin-resistant enterococci (VRE) and extended-spectrum beta-lactamase-producing Enterobacteriaceae (ESBLE) in patients with haematological and oncological malignancies , 2012, Infection.
[44] E. Martens,et al. How glycan metabolism shapes the human gut microbiota , 2012, Nature Reviews Microbiology.
[45] Bernard Henrissat,et al. Recognition and Degradation of Plant Cell Wall Polysaccharides by Two Human Gut Symbionts , 2011, PLoS biology.
[46] G. Gibson,et al. A randomised crossover study investigating the effects of galacto-oligosaccharides on the faecal microbiota in men and women over 50 years of age , 2011, British Journal of Nutrition.
[47] Liping Zhao,et al. Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteers , 2011, The ISME Journal.
[48] J. Portais,et al. High-Throughput Workflow for Monitoring and Mining Bioprocess Data and Its Application to Inferring the Physiological Response of Escherichia coli to Perturbations , 2011, Applied and Environmental Microbiology.
[49] D. Meyer,et al. The bifidogenic effect of inulin and oligofructose and its consequences for gut health , 2009, European Journal of Clinical Nutrition.
[50] Brandi L. Cantarel,et al. The Carbohydrate-Active EnZymes database (CAZy): an expert resource for Glycogenomics , 2008, Nucleic Acids Res..
[51] M. Rossi,et al. Isolation and characterization of a new family 42 beta-galactosidase from the thermoacidophilic bacterium Alicyclobacillus acidocaldarius: identification of the active site residues. , 2008, Biochimica et biophysica acta.
[52] V. Preedy,et al. Fructooligosaccharides and fiber partially prevent the alterations in fecal microbiota and short-chain fatty acid concentrations caused by standard enteral formula in healthy humans. , 2005, The Journal of nutrition.
[53] F. Azpiroz. Intestinal gas dynamics: mechanisms and clinical relevance , 2005, Gut.
[54] S. Lewis,et al. Effect of the prebiotic oligofructose on relapse of Clostridium difficile-associated diarrhea: a randomized, controlled study. , 2005, Clinical gastroenterology and hepatology : the official clinical practice journal of the American Gastroenterological Association.
[55] F. Hallmann. Toxicity of commonly used laxatives. , 2000, Medical science monitor : international medical journal of experimental and clinical research.
[56] I. Björck,et al. Influence of orally and rectally administered propionate on cholesterol and glucose metabolism in obese rats , 1996, British Journal of Nutrition.
[57] S. E. West,et al. Fermentation of mucins and plant polysaccharides by anaerobic bacteria from the human colon , 1977, Applied and environmental microbiology.
[58] J. Gander,et al. Extracellular exo-beta-galactofuranosidase from Penicillium charlesii: isolation, purification, and properties. , 1977, The Journal of biological chemistry.
[59] S. Hakomori. A RAPID PERMETHYLATION OF GLYCOLIPID, AND POLYSACCHARIDE CATALYZED BY METHYLSULFINYL CARBANION IN DIMETHYL SULFOXIDE. , 1964, Journal of biochemistry.
[60] Darwin,et al. Concurrent Lactic and Volatile Fatty Acid Analysis of Microbial Fermentation Samples by Gas Chromatography with Heat Pre-treatment. , 2018, Journal of chromatographic science.
[61] Shumei S. Sun,et al. Effects of prebiotic-containing infant formula on gastrointestinal tolerance and fecal microbiota in a randomized controlled trial. , 2012, JPEN. Journal of parenteral and enteral nutrition.
[62] P. Legendre,et al. vegan : Community Ecology Package. R package version 1.8-5 , 2007 .
[63] P. Quignon,et al. Effects of Lactulose and Lactitol on Colonic Microflora and Enzymatic Activity. , 1997, Scandinavian journal of gastroenterology.