Comparison of the transcriptomes of two tardigrades with different hatching coordination

[1]  The UniProt Consortium,et al.  UniProt: a worldwide hub of protein knowledge , 2018, Nucleic Acids Res..

[2]  Yu Zheng,et al.  piRBase: a comprehensive database of piRNA sequences , 2018, Nucleic Acids Res..

[3]  U. Koziol Precursors of neuropeptides and peptide hormones in the genomes of tardigrades. , 2018, General and comparative endocrinology.

[4]  J. Hui,et al.  Halloween genes in panarthropods and the evolution of the early moulting pathway in Ecdysozoa , 2018, Royal Society Open Science.

[5]  Sheng Li,et al.  Juvenile hormone signaling – a mini review , 2018, Insect science.

[6]  Q. Song,et al.  Cucurbitacin B acts a potential insect growth regulator by antagonizing 20-hydroxyecdysone activity. , 2018, Pest management science.

[7]  Rishav Ray,et al.  piRNA analysis framework from small RNA-Seq data by a novel cluster prediction tool - PILFER. , 2017, Genomics.

[8]  M. Tomita,et al.  Comparative genomics of the tardigrades Hypsibius dujardini and Ramazzottius varieornatus , 2017, bioRxiv.

[9]  G. Mayer,et al.  External morphogenesis of the tardigrade Hypsibius dujardini as revealed by scanning electron microscopy , 2017, Journal of morphology.

[10]  J. Brisson,et al.  Ecdysone signaling underlies the pea aphid transgenerational wing polyphenism , 2017, Proceedings of the National Academy of Sciences.

[11]  A. Jouraku,et al.  Molecular mechanism underlying juvenile hormone-mediated repression of precocious larval–adult metamorphosis , 2017, Proceedings of the National Academy of Sciences.

[12]  T. Kubo,et al.  Establishment of an isogenic strain of the desiccation‐sensitive tardigrade Isohypsibius myrops (Parachela, Eutardigrada) and its life history traits , 2016 .

[13]  Yutaka Suzuki,et al.  Extremotolerant tardigrade genome and improved radiotolerance of human cultured cells by tardigrade-unique protein , 2016, Nature Communications.

[14]  M. Tomita,et al.  Genome sequencing of a single tardigrade Hypsibius dujardini individual , 2016, Scientific Data.

[15]  Lior Pachter,et al.  Near-optimal probabilistic RNA-seq quantification , 2016, Nature Biotechnology.

[16]  F. W. Smith,et al.  The Compact Body Plan of Tardigrades Evolved by the Loss of a Large Body Region , 2016, Current Biology.

[17]  Leon Anavy,et al.  The mid-developmental transition and the evolution of animal body plans , 2016, Nature.

[18]  A. Toyoda,et al.  Novel Mitochondria-Targeted Heat-Soluble Proteins Identified in the Anhydrobiotic Tardigrade Improve Osmotic Tolerance of Human Cells , 2015, PloS one.

[19]  E. Miska,et al.  Ancient and Novel Small RNA Pathways Compensate for the Loss of piRNAs in Multiple Independent Nematode Lineages , 2015, PLoS biology.

[20]  W. Huber,et al.  Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.

[21]  B. Goldstein,et al.  RNA interference can be used to disrupt gene function in tardigrades , 2013, Development Genes and Evolution.

[22]  A. Fujiyama,et al.  Two Novel Heat-Soluble Protein Families Abundantly Expressed in an Anhydrobiotic Tardigrade , 2012, PloS one.

[23]  Steven L Salzberg,et al.  Fast gapped-read alignment with Bowtie 2 , 2012, Nature Methods.

[24]  David Rosenkranz,et al.  proTRAC - a software for probabilistic piRNA cluster detection, visualization and analysis , 2012, BMC Bioinformatics.

[25]  M. Tomita,et al.  G-language genome analysis environment with REST and SOAP web service interfaces , 2010, Nucleic Acids Res..

[26]  R. Bertolani,et al.  Hatching phenology and resting eggs in tardigrades , 2010 .

[27]  Aaron R. Quinlan,et al.  BIOINFORMATICS APPLICATIONS NOTE , 2022 .

[28]  Gonçalo R. Abecasis,et al.  The Sequence Alignment/Map format and SAMtools , 2009, Bioinform..

[29]  Richard Durbin,et al.  Sequence analysis Fast and accurate short read alignment with Burrows – Wheeler transform , 2009 .

[30]  R. O. Schill,et al.  Desiccation tolerance in embryonic stages of the tardigrade , 2008 .

[31]  Masahiko Watanabe,et al.  Establishment of a rearing system of the extremotolerant tardigrade Ramazzottius varieornatus: a new model animal for astrobiology. , 2008, Astrobiology.

[32]  Bob Goldstein,et al.  The tardigrade Hypsibius dujardini, a new model for studying the evolution of development. , 2007, Developmental biology.

[33]  B. Goldstein,et al.  Segmental expression of Pax3/7 and Engrailed homologs in tardigrade development , 2007, Development Genes and Evolution.

[34]  Taisen Iguchi,et al.  Cloning and characterization of the ecdysone receptor and ultraspiracle protein from the water flea Daphnia magna. , 2007, The Journal of endocrinology.

[35]  Masaru Tomita,et al.  G-language System as a platform for large-scale analysis of high-throughput omics data , 2006 .

[36]  S. Sakurai,et al.  Coordinate responses of transcription factors to ecdysone during programmed cell death in the anterior silk gland of the silkworm, Bombyx mori , 2006, Insect molecular biology.

[37]  R. Bertolani,et al.  Phenotypic Variations in the Life History of Two Clones of Macrobiotus richtersi (Eutardigrada, Macrobiotidae) , 2006, Hydrobiologia.

[38]  H. Sonobe,et al.  Ecdysteroids during Early Embryonic Development in Silkworm Bombyx mori: Metabolism and Functions , 2004, Zoological science.

[39]  Hajime Watanabe,et al.  Juvenile hormone agonists affect the occurrence of male Daphnia. , 2003, Chemosphere.

[40]  Masaru Tomita,et al.  G-language Genome Analysis Environment: a workbench for nucleotide sequence data mining , 2003, Bioinform..

[41]  S. Klaine,et al.  Incomplete ecdysis is an indicator of ecdysteroid exposure in Daphnia magna , 2001, Environmental toxicology and chemistry.

[42]  Thomas L. Madden,et al.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. , 1997, Nucleic acids research.

[43]  J. Tilley,et al.  Effects of Two Carbamates on Infective Juveniles of Stemernema carpocapsae All Strain and Steinernema feltiae Umeå Strain. , 1996, Journal of nematology.

[44]  P. Karlson On the hormonal control of insect metamorphosis. A historical review. , 1996, The International journal of developmental biology.

[45]  M. Bownes,et al.  The titre of juvenile hormone during the pupal and adult stages of the life cycle of Drosophila melanogaster. , 1987, European journal of biochemistry.

[46]  D. Keilin The Leeuwenhoek Lecture - The problem of anabiosis or latent life: history and current concept , 1959, Proceedings of the Royal Society of London. Series B - Biological Sciences.

[47]  T. Altiero,et al.  Reproduction, Development and Life Cycles , 2018 .