A Novel Method for Describing Texture of Scar Collagen Using Second Harmonic Generation Images

Texture features related to scar collagen second harmonic generation (SHG) images are useful for studying scars; however, current computational analysis methods require extensive computing resources. We designed a local orientation ternary pattern (LOTP) method in the SHG images for the purpose of extracting the characterization. SHG images were generated from human scar tissue samples, with scar age ranging from 2 to 40 years. Depending on the complete texture information of LOTP images, we extracted the Tamura features including coarseness, contrast, directionality, regularity, line-likeness, and roughness. Tamura texture features could be measured for all input patterns to set up a regression model about the age of scars and that give well-distributed results. Generalized boosted regression trees were calculated with the computed data, and R2 and root-mean-square error (RMSE) statistical analysis were used to determine accuracy. Use of the LOTP operator allowed for the maximum extraction and relative importance of Tamura feature data, with roughness being the most important feature and line-likeness being the least important feature. Using the LOTP operator resulted in the highest accuracy assessment of scar characteristics compared to other methods, such as improving local ternary pattern, binary gradient contours, and grey level co-occurrence. Our proposed LOTP method requires less computation time than the extension of LTP and describes SHG images with higher accuracy compared to existing algorithms.

[1]  Stefan M. Rüger,et al.  Evaluation of Texture Features for Content-Based Image Retrieval , 2004, CIVR.

[2]  Rohit Bhargava,et al.  Quantifying collagen structure in breast biopsies using second-harmonic generation imaging , 2012, Biomedical optics express.

[3]  Nick Cercone,et al.  Local Triplet Pattern for Content-Based Image Retrieval , 2009, ICIAR.

[4]  Xiaoyang Tan,et al.  Enhanced Local Texture Feature Sets for Face Recognition Under Difficult Lighting Conditions , 2007, IEEE Transactions on Image Processing.

[5]  Loris Nanni,et al.  Local binary patterns variants as texture descriptors for medical image analysis , 2010, Artif. Intell. Medicine.

[6]  Nathan E. Bunderson,et al.  Quantification of Feature Space Changes With Experience During Electromyogram Pattern Recognition Control , 2012, IEEE Transactions on Neural Systems and Rehabilitation Engineering.

[7]  E. Mazza,et al.  Second harmonic generation microscopy of fetal membranes under deformation: normal and altered morphology. , 2013, Placenta.

[8]  Hideyuki Tamura,et al.  Textural Features Corresponding to Visual Perception , 1978, IEEE Transactions on Systems, Man, and Cybernetics.

[9]  J. Friedman Greedy function approximation: A gradient boosting machine. , 2001 .

[10]  Francesco Bianconi,et al.  Image classification with binary gradient contours , 2011 .

[11]  Marcos X. Álvarez-Cid,et al.  Texture Description Through Histograms of Equivalent Patterns , 2012, Journal of Mathematical Imaging and Vision.

[12]  Hao Yu-bao Image retrieval based on improved Tamura texture features , 2010 .

[13]  Hongyuan Zha,et al.  A General Boosting Method and its Application to Learning Ranking Functions for Web Search , 2007, NIPS.

[14]  Xiaoqin Zhu,et al.  Characteristics of scar margin dynamic with time based on multiphoton microscopy , 2011, Lasers in Medical Science.

[15]  Zhenhua Guo,et al.  A Completed Modeling of Local Binary Pattern Operator for Texture Classification , 2010, IEEE Transactions on Image Processing.

[16]  Loris Nanni,et al.  A local approach based on a Local Binary Patterns variant texture descriptor for classifying pain states , 2010, Expert Syst. Appl..

[17]  Zhang Guo-an,et al.  The content and ratio of type I and III collagen in skin differ with age and injury , 2011 .

[18]  J. Frazier,et al.  Weighing Risk Factors Associated with Bee Colony Collapse Disorder by Classification and Regression Tree Analysis , 2010, Journal of economic entomology.

[19]  Shuangmu Zhuo,et al.  Quantified characterization of human cutaneous normal scar using multiphoton microscopy , 2009, Journal of biophotonics.

[20]  P. Sathyanarayana,et al.  Image Texture Feature Extraction Using GLCM Approach , 2013 .

[21]  Shouyi Yin,et al.  A High Precision Feature Based on LBP and Gabor Theory for Face Recognition , 2013, Sensors.

[22]  Tsair-Fwu Lee,et al.  Improving face recognition performance using similarity feature-based selection and classification algorithm , 2015, J. Inf. Hiding Multim. Signal Process..

[23]  C. Profyris,et al.  Cutaneous scarring: Pathophysiology, molecular mechanisms, and scar reduction therapeutics Part II. Strategies to reduce scar formation after dermatologic procedures. , 2012, Journal of the American Academy of Dermatology.

[24]  A. Singer,et al.  Cutaneous wound healing. , 1999, The New England journal of medicine.

[25]  Chuen-Horng Lin,et al.  Fast segmentation of porcelain images based on texture features , 2010, J. Vis. Commun. Image Represent..

[26]  Souhaib Ben Taieb,et al.  A gradient boosting approach to the Kaggle load forecasting competition , 2014 .

[27]  J. M. Hans du Buf,et al.  A review of recent texture segmentation and feature extraction techniques , 1993 .

[28]  Leo Breiman,et al.  Classification and Regression Trees , 1984 .

[29]  Matti Pietikäinen,et al.  Multiresolution Gray-Scale and Rotation Invariant Texture Classification with Local Binary Patterns , 2002, IEEE Trans. Pattern Anal. Mach. Intell..

[30]  Nicu Sebe,et al.  Texture Features for Content-Based Retrieval , 2001, Principles of Visual Information Retrieval.

[31]  D. Steel,et al.  Visual outcome after open globe injury: a comparison of two prognostic models—the Ocular Trauma Score and the Classification and Regression Tree , 2010, Eye.

[32]  Richard C. Olsen,et al.  Haralick texture features expanded into the spectral domain , 2006, SPIE Defense + Commercial Sensing.