Structural and dynamical characteristics of tropomyosin epitopes as the major allergens in shrimp.
暂无分享,去创建一个
M. Takano | S. Watabe | K. Umezawa | S. Ishizaki | Y. Ochiai | Hideo Ozawa
[1] Joseph L. Baumert,et al. Conformational stability of digestion-resistant peptides of peanut conglutins reveals the molecular basis of their allergenicity , 2016, Scientific Reports.
[2] Wenjun Zheng,et al. Investigating the effects of tropomyosin mutations on its flexibility and interactions with filamentous actin using molecular dynamics simulation , 2016, Journal of Muscle Research and Cell Motility.
[3] Julian E. Fuchs,et al. Localization of Millisecond Dynamics: Dihedral Entropy from Accelerated MD , 2016, Journal of chemical theory and computation.
[4] Stefan Raunser,et al. Cryo-EM structure of a human cytoplasmic actomyosin complex at near-atomic resolution , 2016, Nature.
[5] Stefan Fischer,et al. Phosphorylation of Ser283 enhances the stiffness of the tropomyosin head-to-tail overlap domain. , 2015, Archives of biochemistry and biophysics.
[6] Julian E. Fuchs,et al. The Impact of Nitration on the Structure and Immunogenicity of the Major Birch Pollen Allergen Bet v 1.0101 , 2014, PloS one.
[7] Marek Orzechowski,et al. An atomic model of the tropomyosin cable on F-actin. , 2014, Biophysical journal.
[8] Marek Orzechowski,et al. The structural dynamics of α-tropomyosin on F-actin shape the overlap complex between adjacent tropomyosin molecules. , 2014, Archives of biochemistry and biophysics.
[9] Marek Orzechowski,et al. Structure and flexibility of the tropomyosin overlap junction. , 2014, Biochemical and biophysical research communications.
[10] Jason M. Swails,et al. Constant pH Replica Exchange Molecular Dynamics in Explicit Solvent Using Discrete Protonation States: Implementation, Testing, and Validation , 2014, Journal of chemical theory and computation.
[11] S. Stagg,et al. Cryo-EM structures of the actin:tropomyosin filament reveal the mechanism for the transition from C- to M-state. , 2013, Journal of molecular biology.
[12] Wenjun Zheng,et al. Probing the flexibility of tropomyosin and its binding to filamentous actin using molecular dynamics simulations. , 2013, Biophysical journal.
[13] Ross C. Walker,et al. An overview of the Amber biomolecular simulation package , 2013 .
[14] A. Holck,et al. Tropomyosin from tilapia (Oreochromis mossambicus) as an allergen , 2013, Clinical and experimental allergy : journal of the British Society for Allergy and Clinical Immunology.
[15] Stefan Fischer,et al. The flexibility of two tropomyosin mutants, D175N and E180G, that cause hypertrophic cardiomyopathy. , 2012, Biochemical and biophysical research communications.
[16] Stefan Raunser,et al. Structure of the Rigor Actin-Tropomyosin-Myosin Complex , 2012, Cell.
[17] S. Watabe,et al. Thermodynamic characterization of muscle tropomyosins from marine invertebrates. , 2011, Comparative biochemistry and physiology. Part B, Biochemistry & molecular biology.
[18] M. Yokoro,et al. Gastrointestinal Digestion and Absorption of Pen j 1, a Major Allergen from Kuruma Prawn, Penaeus japonicus , 2011, Bioscience, biotechnology, and biochemistry.
[19] Stefan Fischer,et al. The relationship between curvature, flexibility and persistence length in the tropomyosin coiled-coil. , 2010, Journal of structural biology.
[20] Stefan Fischer,et al. Curvature variation along the tropomyosin molecule. , 2010, Journal of structural biology.
[21] Stefan Fischer,et al. The shape and flexibility of tropomyosin coiled coils: implications for actin filament assembly and regulation. , 2010, Journal of molecular biology.
[22] S. K. Lakkaraju,et al. Modulation of Elasticity in Functionally Distinct Domains of the Tropomyosin Coiled-Coil , 2009, Cellular and molecular bioengineering.
[23] N. Oda,et al. Two-crystal structures of tropomyosin C-terminal fragment 176-273: exposure of the hydrophobic core to the solvent destabilizes the tropomyosin molecule. , 2008, Biophysical journal.
[24] Y. Shirakihara,et al. Structural basis for tropomyosin overlap in thin (actin) filaments and the generation of a molecular swivel by troponin-T , 2008, Proceedings of the National Academy of Sciences.
[25] J. Sumida,et al. Conserved Asp-137 Imparts Flexibility to Tropomyosin and Affects Function* , 2008, Journal of Biological Chemistry.
[26] J. Jenkins,et al. Evolutionary distance from human homologs reflects allergenicity of animal food proteins. , 2007, The Journal of allergy and clinical immunology.
[27] G. Montelione,et al. Solution NMR structure of the junction between tropomyosin molecules: implications for actin binding and regulation. , 2006, Journal of molecular biology.
[28] C. Cohen,et al. Structure of the mid-region of tropomyosin: bending and binding sites for actin. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[29] E. Mills,et al. Stability of the major allergen Brazil nut 2S albumin (Ber e 1) to physiologically relevant in vitro gastrointestinal digestion , 2005, The FEBS journal.
[30] G. Reese,et al. Molecular Basis of Arthropod Cross-Reactivity: IgE-Binding Cross-Reactive Epitopes of Shrimp, House Dust Mite and Cockroach Tropomyosins , 2002, International Archives of Allergy and Immunology.
[31] G. Reese,et al. Identification of Continuous, Allergenic Regions of the Major Shrimp Allergen Pen a 1 (Tropomyosin) , 2002, International Archives of Allergy and Immunology.
[32] K H Kim,et al. Deciphering the design of the tropomyosin molecule , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[33] Roy L. Fuchs,et al. Stability of food allergens to digestion in vitro , 1996, Nature Biotechnology.
[34] T. Darden,et al. Particle mesh Ewald: An N⋅log(N) method for Ewald sums in large systems , 1993 .
[35] G. Phillips,et al. Tropomyosin crystal structure and muscle regulation. , 1986, Journal of molecular biology.
[36] H. Berendsen,et al. Molecular dynamics with coupling to an external bath , 1984 .
[37] W. Kabsch,et al. Dictionary of protein secondary structure: Pattern recognition of hydrogen‐bonded and geometrical features , 1983, Biopolymers.
[38] D. Parry. Coiled-coils in α-helix-containing proteins: analysis of the residue types within the heptad repeat and the use of these data in the prediction of coiled-coils in other proteins , 1982, Bioscience reports.
[39] G. Ciccotti,et al. Numerical Integration of the Cartesian Equations of Motion of a System with Constraints: Molecular Dynamics of n-Alkanes , 1977 .
[40] T. Schwede,et al. Protein structure homology modeling using SWISS-MODEL workspace , 2008, Nature Protocols.
[41] E. Padlan,et al. Why is there a greater incidence of allergy to the tropomyosin of certain animals than to that of others? , 2007, Medical hypotheses.
[42] Sergei V Strelkov,et al. Analysis of alpha-helical coiled coils with the program TWISTER reveals a structural mechanism for stutter compensation. , 2002, Journal of structural biology.
[43] G. Phillips,et al. Crystal structure of tropomyosin at 7 Ångstroms resolution , 2000, Proteins.
[44] R D Appel,et al. Protein identification and analysis tools in the ExPASy server. , 1999, Methods in molecular biology.
[45] L. Chiche,et al. Molecular modeling of coiled-coil alpha-tropomyosin: analysis of staggered and in register helix-helix interactions. , 1993, Protein engineering.