Improving early prostate cancer diagnosis by using Artificial Neural Networks and Deep Learning

Prostate cancer could be diagnosed by routine controls such as biopsy. But considering prostate biopsy side effects, using automated tools along with some selected features in early diagnosis of this cancer seems necessary. Even though production of this tool previously has been done, but the importance of the issue binds us to increase its accuracy as much as possible. Using Deep Learning to enhance medical diagnosis is an important matter in areas of research. Deep Learning & Artificial Neural Networks are classification algorithms that can be used for classification. In this movement, we are going to improve existing classifier based expert system for early diagnosis of the organ to attain informed decision without biopsy by using some definite features. 50 data used in this paper are collected from Imam Reza hospital (Tehran). Classifying training input data, we have used following classifiers: Scaled conjugate gradient (SCG), Broyden-Fletcher-Goldfarb-Shanno (BFGS), and Levenberg-Marquardt(LM) training algorithms of Artificial Neural Networks (ANN); and AlexNet which is one of the CNN-based methods of Deep Learning. The proposed system was designed based on AlexNet function which had the best performance among existing methods. In fact, this paper is going to state how deep learning could be used for early diagnosis of cancer and Deep Learning advantages of SVM in cancer diagnosis as well. In the end, the predictive accuracy of the mentioned method of Deep Learning has been compared with that of gained by use of SVM and ANN. Deep Learning achieved classification accuracy is 86.3%, while for SVM was 81.1% and for ANN 79.3%. But sensitivity and specificity didn’t have considerable changes.

[1]  D. Wells,et al.  A medical expert system approach using artificial neural networks for standardized treatment planning. , 1998, International journal of radiation oncology, biology, physics.

[2]  P. Jackson,et al.  Prostate Cancer: Methods and Protocols , 2018 .

[3]  Purang Abolmaesumi,et al.  Ultrasound-Based Detection of Prostate Cancer Using Automatic Feature Selection with Deep Belief Networks , 2015, MICCAI.

[4]  Wei Li,et al.  Prostate cancer diagnosis using deep learning with 3D multiparametric MRI , 2017, Medical Imaging.

[5]  F. Nicolantonio,et al.  Liquid biopsy: monitoring cancer-genetics in the blood , 2013, Nature Reviews Clinical Oncology.

[6]  Manfred Huber,et al.  Using deep learning to enhance cancer diagnosis and classication , 2013 .

[7]  Yaozong Gao,et al.  Deformable MR Prostate Segmentation via Deep Feature Learning and Sparse Patch Matching , 2017, Deep Learning for Medical Image Analysis.

[8]  Shan Suthaharan,et al.  Machine Learning Models and Algorithms for Big Data Classification , 2016 .

[9]  Mesut Remzi,et al.  Novel artificial neural network for early detection of prostate cancer. , 2002, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[10]  Chih-Jen Lin,et al.  A comparison of methods for multiclass support vector machines , 2002, IEEE Trans. Neural Networks.

[11]  Purang Abolmaesumi,et al.  A deep learning approach for real time prostate segmentation in freehand ultrasound guided biopsy , 2018, Medical Image Anal..

[12]  Bram van Ginneken,et al.  A survey on deep learning in medical image analysis , 2017, Medical Image Anal..

[13]  Geoffrey E. Hinton,et al.  Deep Learning , 2015, Nature.

[14]  Shigeo Abe DrEng Pattern Classification , 2001, Springer London.

[15]  David G. Stork,et al.  Pattern Classification , 1973 .

[16]  Kai Zhang,et al.  Deep learning for image-based cancer detection and diagnosis - A survey , 2018, Pattern Recognit..

[17]  Andreas Christmann,et al.  Support vector machines , 2008, Data Mining and Knowledge Discovery Handbook.

[18]  Mehmet Engin,et al.  Early prostate cancer diagnosis by using artificial neural networks and support vector machines , 2009, Expert Syst. Appl..

[19]  Feng Liu,et al.  Deep Learning and Its Applications in Biomedicine , 2018, Genom. Proteom. Bioinform..

[20]  Shu Liao,et al.  Representation Learning: A Unified Deep Learning Framework for Automatic Prostate MR Segmentation , 2013, MICCAI.

[21]  Itsuo Kumazawa,et al.  MP20-10 DEEP LEARNING WITH A CONVOLUTIONAL NEURAL NETWORK ALGORITHM FOR FULLY AUTOMATED DETECTION OF PROSTATE CANCER USING PRE-BIOPSY MRI , 2018 .

[22]  Mohamed Abou El-Ghar,et al.  A new NMF-autoencoder based CAD system for early diagnosis of prostate cancer , 2016, 2016 IEEE 13th International Symposium on Biomedical Imaging (ISBI).