Computational Representation of Medical Concepts: A Semiotic and Fuzzy Logic Approach

Medicine and biology are among the fastest growing application areas of computer-based systems. Nonetheless, the creation of a computerized support for the health systems presents manifold challenges. One of the major problems is the modeling and interpretation of heterogeneous concepts used in medicine. The medical concepts such as, for example, specific symptoms and their etiologies, are described using terms from diverse domains - some concepts are described in terms of molecular biology and genetics, some concepts use models from chemistry and physics; yet some, for example, mental disorders, are defined in terms of particular feelings, behaviours, habits, and life events. Moreover, the computational representation of medical concepts must be (1) formally or rigorously specified to be processed by a computer, (2) human-readable to be validated by humans, and (3) sufficiently expressive to model concepts which are inherently complex, multi-dimensional, goal-oriented, and, at the same time, evolving and often imprecise. In this chapter, we present a meta-modeling framework for computational representation of medical concepts. Our framework is based on semiotics and fuzzy logic to explicitly model two important characteristics of medical concepts: changeability and imprecision. Furthermore, the framework uses a multi-layered specification linking together three domains: medical, computational, and implementational. We describe the framework using an example of mental disorders, specifically, the concept of clinical depression. To exemplify the changeable character of medical concepts, we discuss the evolution of the diagnostic criteria for depression. We discuss the computational representation for polythetic and categorical concepts and for multi-dimensional and noncategorical concepts. We demonstrate how the proposed modeling framework utilizes (1) a fuzzy-logic approach to represent the non-categorical (continuous) nature of the symptoms and (2) a semiotic approach to represent the contextual interpretation and dimensional nature of the symptoms.

[1]  Peter Hunter,et al.  A strategy for integrative computational physiology. , 2005, Physiology.

[2]  Marcel Danesi,et al.  The Forms of Meaning: Modeling Systems Theory and Semiotic Analysis , 2000 .

[3]  Sheng-Cheng Huang,et al.  A semiotic view of information: Semiotics as a foundation of LIS research in information behavior , 2007, ASIST.

[4]  Andrzej P. Wierzbicki,et al.  Modelling as a way of organising knowledge , 2007, Eur. J. Oper. Res..

[5]  Daniel Chandler,et al.  Semiotics: The Basics , 2001 .

[6]  M. Hamilton A RATING SCALE FOR DEPRESSION , 1960, Journal of neurology, neurosurgery, and psychiatry.

[7]  Douglas L. Medin,et al.  Context theory of classification learning. , 1978 .

[8]  Paulo J. G. Lisboa,et al.  Fuzzy systems in medicine , 2000 .

[9]  Tang-Kai Yin,et al.  A computer-aided diagnosis for distinguishing Tourette's syndrome from chronic tic disorder in children by a fuzzy system with a two-step minimization approach , 2004, IEEE Trans. Biomed. Eng..

[10]  J. D. Smith,et al.  Prototypes in category learning: the effects of category size, category structure, and stimulus complexity. , 2001, Journal of experimental psychology. Learning, memory, and cognition.

[11]  L. A. Zadeh,et al.  A note on prototype theory and fuzzy sets , 1982, Cognition.

[12]  Lotfi A. Zadeh,et al.  Fuzzy Sets , 1996, Inf. Control..

[13]  E. Czogala,et al.  Entropy and Energy Measures of Fuzziness in ECG Signal Processing , 2000 .

[14]  K. Adlassnig A Fuzzy Logical Model of Computer-Assisted Medical Diagnosis , 1980, Methods of Information in Medicine.

[15]  William M. Smith,et al.  A Study of Thinking , 1956 .

[16]  R. Merton,et al.  Genesis and development of a scientific fact , 1979 .

[17]  M. Wong,et al.  Biology of depression , 2005 .

[18]  R. Manber,et al.  Emotional blunting associated with SSRI-induced sexual dysfunction. Do SSRIs inhibit emotional responses? , 2002, The international journal of neuropsychopharmacology.

[19]  Rudolf Seising,et al.  From vagueness in medical thought to the foundations of fuzzy reasoning in medical diagnosis , 2006, Artif. Intell. Medicine.

[20]  K Sadegh-Zadeh,et al.  Fuzzy health, illness, and disease. , 2000, The Journal of medicine and philosophy.

[21]  E. Rosch,et al.  Family resemblances: Studies in the internal structure of categories , 1975, Cognitive Psychology.

[22]  Robert F Krueger,et al.  Enhancing research and treatment of mental disorders with dimensional concepts: toward DSM‐V and ICD‐11 , 2009, World psychiatry : official journal of the World Psychiatric Association.

[23]  M M Ohayon,et al.  Improving decisionmaking processes with the fuzzy logic approach in the epidemiology of sleep disorders. , 1999, Journal of psychosomatic research.

[24]  Harold Alan Pincus,et al.  Classification of Depression: Research and Diagnostic Criteria: DSM‐IV and ICD‐10 , 2008 .

[25]  Stuart C. Shapiro Review of Knowledge representation: logical, philosophical, and computational foundations by John F. Sowa. Brooks/Cole 2000. , 2001 .

[26]  Wayne D. Gray,et al.  Basic objects in natural categories , 1976, Cognitive Psychology.

[27]  R. Nosofsky Exemplars, prototypes, and similarity rules. , 1992 .

[28]  Klaus-Peter Adlassnig,et al.  Fuzzy Set Theory in Medical Diagnosis , 1986, IEEE Transactions on Systems, Man, and Cybernetics.

[29]  John F. Sowa,et al.  Knowledge representation: logical, philosophical, and computational foundations , 2000 .

[30]  Peter Szolovits,et al.  What Is a Knowledge Representation? , 1993, AI Mag..

[31]  H. Kitano,et al.  Computational systems biology , 2002, Nature.

[32]  L. Barsalou Context-independent and context-dependent information in concepts , 1982, Memory & cognition.

[33]  Jason H T Bates,et al.  Applying fuzzy logic to medical decision making in the intensive care unit. , 2003, American journal of respiratory and critical care medicine.

[34]  Carole A. Goble,et al.  Towards an ontology for psychosis , 2010, Cognitive Systems Research.

[35]  I. Modai,et al.  Fuzzy Logic Detection of Medically Serious Suicide Attempt Records in Major Psychiatric Disorders , 2004, The Journal of nervous and mental disease.

[36]  Thomas E. Rothenfluh,et al.  Representation and Acquisition of Knowledge for a Fuzzy Medical Consultation System , 2000 .