InSTREAM-Gen: Modelling eco-evolutionary dynamics of trout populations under anthropogenic environmental change
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Steven F. Railsback | Jürgen Groeneveld | Daniel Ayllón | Volker Grimm | V. Grimm | S. Railsback | S. Vincenzi | J. Groeneveld | Simone Vincenzi | Ana Almodóvar | D. Ayllón | A. Almodóvar
[1] S. Railsback,et al. Feeding modes in stream salmonid population models: is drift feeding the whole story? , 2013, Environmental Biology of Fishes.
[2] S. Einum,et al. Maternal effects of egg size in brown trout (Salmo trutta): norms of reaction to environmental quality , 1999, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[3] B. Jonsson,et al. A review of the likely effects of climate change on anadromous Atlantic salmon Salmo salar and brown trout Salmo trutta, with particular reference to water temperature and flow. , 2009, Journal of fish biology.
[4] N. Barton,et al. Multifactorial genetics: Understanding quantitative genetic variation , 2002, Nature Reviews Genetics.
[5] Steven F. Railsback,et al. InSTREAM: the individual-based stream trout research and environmental assessment model , 2009 .
[6] Sylvia R. Esterby,et al. Review of methods for the detection and estimation of trends with emphasis on water quality applications , 1996 .
[7] D. Ayllón,et al. Modelling brown trout spatial requirements through physical habitat simulations , 2010 .
[8] Uta Berger,et al. Making Predictions in a Changing World: The Benefits of Individual-Based Ecology , 2014, Bioscience.
[9] Peter Kareiva,et al. U.S. Natural Resources and Climate Change: Concepts and Approaches for Management Adaptation , 2009, Environmental management.
[10] E. Meir,et al. Time to Evolve? Potential Evolutionary Responses of Fraser River Sockeye Salmon to Climate Change and Effects on Persistence , 2011, PloS one.
[11] Christina L. Tague,et al. RHESSys: Regional Hydro-Ecologic Simulation System—An Object- Oriented Approach to Spatially Distributed Modeling of Carbon, Water, and Nutrient Cycling , 2004 .
[12] J. Fremlin. Predicting Population , 1972, Nature.
[13] Philippe Baret,et al. Simulating brown trout demogenetics in a river/nursery brook system: The individual-based model DemGenTrout , 2013 .
[14] R. Lande,et al. Adaptation, Plasticity, and Extinction in a Changing Environment: Towards a Predictive Theory , 2010, PLoS biology.
[15] Max D. Morris,et al. Factorial sampling plans for preliminary computational experiments , 1991 .
[16] J. Rosenfeld. Modelling the effects of habitat on self-thinning, energy equivalence, and optimal habitat structure for juvenile trout , 2014 .
[17] R. Hirsch,et al. Techniques of trend analysis for monthly water quality data , 1982 .
[18] U. Dieckmann,et al. Demographic and Evolutionary Consequences of Selective Mortality: Predictions from an Eco-Genetic Model for Smallmouth Bass , 2007 .
[19] Jason Lowe,et al. Quantifying the benefit of early climate change mitigation in avoiding biodiversity loss , 2013 .
[20] J. M. Elliott. Numerical changes and population regulation in young migratory trout Salmo trutta in a Lake District stream, 1966-83 , 1984 .
[21] D. Ayllón,et al. Thermal Carrying Capacity for a Thermally-Sensitive Species at the Warmest Edge of Its Range , 2013, PloS one.
[22] Jennifer L. Hill,et al. An Energetic Model of Microhabitat Use for Rainbow Trout and Rosyside Dace , 1993 .
[23] Nicholas F. Hughes,et al. Selection of Positions by Drift-Feeding Salmonids in Dominance Hierarchies: Model and Test for Arctic Grayling (Thymallus arcticus) in Subarctic Mountain Streams, Interior Alaska , 1992 .
[24] U. Sommer,et al. Global warming benefits the small in aquatic ecosystems , 2009, Proceedings of the National Academy of Sciences.
[25] T. Höök,et al. Eco-genetic model to explore fishing-induced ecological and evolutionary effects on growth and maturation schedules , 2009, Evolutionary applications.
[26] Freshwater resources , 2022 .
[27] Cyril Piou,et al. Contrasting effects of climate change in continental vs. oceanic environments on population persistence and microevolution of Atlantic salmon , 2013, Global change biology.
[28] S. Yue,et al. The Mann-Kendall Test Modified by Effective Sample Size to Detect Trend in Serially Correlated Hydrological Series , 2004 .
[29] D. Tallmon,et al. Genetic change for earlier migration timing in a pink salmon population , 2012, Proceedings of the Royal Society B: Biological Sciences.
[30] J. Post,et al. Rapid depletion of genotypes with fast growth and bold personality traits from harvested fish populations , 2008, Proceedings of the National Academy of Sciences.
[31] M. R. Evans,et al. Modelling ecological systems in a changing world , 2012, Philosophical Transactions of the Royal Society B: Biological Sciences.
[32] Michael Frankfurter,et al. Statistical Methods For Environmental Pollution Monitoring , 2016 .
[33] Steven F Railsback,et al. Trait-mediated trophic interactions: is foraging theory keeping up? , 2013, Trends in ecology & evolution.
[34] Laëtitia Buisson,et al. Climate‐induced changes in the distribution of freshwater fish: observed and predicted trends , 2013 .
[35] Keith Brander,et al. Quantitative approaches in climate change ecology , 2011, Global Change Biology.
[36] S. Railsback,et al. Contrast of Degraded and Restored Stream Habitat Using an Individual-Based Salmon Model , 2013 .
[37] P. Baret,et al. A review of ecological models for brown trout: towards a new demogenetic model , 2011 .
[38] H. B. Mann. Nonparametric Tests Against Trend , 1945 .
[39] Michele Bellingeri,et al. Consequences of extreme events on population persistence and evolution of a quantitative trait , 2012, Ecol. Informatics.
[40] S. Leal. Genetics and Analysis of Quantitative Traits , 2001 .
[41] Volker Grimm,et al. Using pattern-oriented modeling for revealing hidden information: a key for reconciling ecological theory and application , 2003 .
[42] U. Dieckmann,et al. The impact of fishing-induced mortality on the evolution of alternative life-history tactics in brook charr , 2008, Evolutionary applications.
[43] M. Esteve,et al. Observations of Spawning Behaviour in Salmoninae: Salmo, Oncorhynchus and Salvelinus , 2005, Reviews in Fish Biology and Fisheries.
[44] R. O. Gilbert. Statistical Methods for Environmental Pollution Monitoring , 1987 .
[45] R. Huey,et al. Potential responses to climate change in organisms with complex life histories: evolution and plasticity in Pacific salmon , 2008, Evolutionary applications.
[46] Andreas Focks,et al. Towards better modelling and decision support: Documenting model development, testing, and analysis using TRACE , 2014 .
[47] Uta Berger,et al. Pattern-Oriented Modeling of Agent-Based Complex Systems: Lessons from Ecology , 2005, Science.
[48] D. Ayllón,et al. Ontogenetic and spatial variations in brown trout habitat selection , 2010 .
[49] Successes, failures, and opportunities in the practical application of drift-foraging models , 2014, Environmental Biology of Fishes.
[50] S. Vincenzi. Extinction risk and eco-evolutionary dynamics in a variable environment with increasing frequency of extreme events , 2014, Journal of The Royal Society Interface.
[51] Andrea Saltelli,et al. An effective screening design for sensitivity analysis of large models , 2007, Environ. Model. Softw..
[52] Volker Grimm,et al. Ecological models supporting environmental decision making: a strategy for the future. , 2010, Trends in ecology & evolution.
[53] Scott J. Goetz,et al. Terrestrial and Inland Water Systems , 2014 .
[54] Volker Grimm,et al. Merging validation and evaluation of ecological models to ‘evaludation’: A review of terminology and a practical approach , 2014 .
[55] H. Jager. Individual variation in life history characteristics can influence extinction risk , 2001 .
[56] Steven F. Railsback,et al. Movement rules for individual-based models of stream fish , 1999 .
[57] Latitude and altitude differentially shape life history trajectories between the sexes in non-anadromous brown trout , 2014, Evolutionary Ecology.
[58] Tamara C. Grand,et al. Physiological Ecology Meets the Ideal-free Distribution: Predicting the Distribution of Size-structured Fish Populations Across Temperature Gradients , 2000, Environmental Biology of Fishes.
[59] Winfried Kurth,et al. Facilitating Parameter Estimation and Sensitivity Analysis of Agent-Based Models: A Cookbook Using NetLogo and 'R' , 2014, J. Artif. Soc. Soc. Simul..
[60] D. Schluter,et al. Adaptation from standing genetic variation. , 2008, Trends in ecology & evolution.
[61] Tomasz Wyszomirski,et al. Modelling the role of social behavior in the persistence of the alpine marmot Marmota marmota , 2003 .
[62] M. Mangel,et al. Selective consequences of catastrophes for growth rates in a stream-dwelling salmonid , 2012, Oecologia.
[63] J. Hutchings,et al. Plastic and evolutionary responses to climate change in fish , 2014, Evolutionary applications.
[64] D. Ayllón,et al. Global warming threatens the persistence of Mediterranean brown trout , 2012 .
[65] Steven F. Railsback,et al. ANALYSIS OF HABITAT‐SELECTION RULES USING ANINDIVIDUAL‐BASED MODEL , 2002 .
[66] S. Carlson,et al. A review of quantitative genetic components of fitness in salmonids: implications for adaptation to future change , 2008, Evolutionary applications.
[67] D. Ayllón,et al. Modelling carrying capacity dynamics for the conservation and management of territorial salmonids , 2012 .
[68] Richard J. Beckman,et al. A Comparison of Three Methods for Selecting Values of Input Variables in the Analysis of Output From a Computer Code , 2000, Technometrics.
[69] M. D. McKay,et al. A comparison of three methods for selecting values of input variables in the analysis of output from a computer code , 2000 .
[70] Birgit Müller,et al. A standard protocol for describing individual-based and agent-based models , 2006 .
[71] L. Crozier,et al. Using Time Series Analysis to Characterize Evolutionary and Plastic Responses to Environmental Change: A Case Study of a Shift toward Earlier Migration Date in Sockeye Salmon , 2011, The American Naturalist.
[72] Steven F. Railsback,et al. Tests of Theory for Diel Variation in Salmonid Feeding Activity and Habitat Use , 2005 .
[73] Steven F. Railsback,et al. Individual-based modeling and ecology , 2005 .
[74] B. Sheldon,et al. Quantitative Assessment of the Importance of Phenotypic Plasticity in Adaptation to Climate Change in Wild Bird Populations , 2013, PLoS biology.
[75] J. Sanjay,et al. Regional Climate Change Scenarios , 2017 .
[76] Stewart J. Cohen,et al. Climate Change 2014: Impacts,Adaptation, and Vulnerability. Part A: Global and Sectoral Aspects. Contribution of Working Group II to the Fifth Assessment Report of the Intergovernmental Panel on Climate Change , 2014 .
[77] Cyril Piou,et al. A demo-genetic individual-based model for Atlantic salmon populations: Model structure, parameterization and sensitivity , 2012 .
[78] R. Nisbet,et al. Predicting Population Dynamics from the Properties of Individuals: A Cross-Level Test of Dynamic Energy Budget Theory , 2013, The American Naturalist.
[79] U. Dieckmann,et al. Eco-genetic modeling of contemporary life-history evolution. , 2009, Ecological applications : a publication of the Ecological Society of America.
[80] U. Dieckmann,et al. Ecology: Managing Evolving Fish Stocks , 2007, Science.
[81] Derek E. Lee,et al. POPULATION‐LEVEL ANALYSIS AND VALIDATION OF AN INDIVIDUAL‐BASED CUTTHROAT TROUT MODEL , 2002 .
[82] K. Fausch,et al. Profitable stream positions for salmonids: relating specific growth rate to net energy gain , 1984 .
[83] C. Azorín-Molina,et al. Impact of climate and land use change on water availability and reservoir management: scenarios in the Upper Aragón River, Spanish Pyrenees. , 2014, The Science of the total environment.
[84] L. Comte,et al. Do stream fish track climate change? Assessing distribution shifts in recent decades , 2013 .
[85] U. Netlogo Wilensky,et al. Center for Connected Learning and Computer-Based Modeling , 1999 .
[86] E. Garcia-Vazquez,et al. Alternative mating strategies in Atlantic salmon and brown trout. , 2001, The Journal of heredity.
[87] M. Mangel,et al. Eco-evolutionary dynamics induced by massive mortality events. , 2014, Journal of fish biology.
[88] B. Jonsson,et al. Ecology of Atlantic Salmon and Brown Trout Habitat as a Template for Life Histories General Conclusions and Research Tasks , 2011 .
[89] J. Gareth Polhill,et al. The ODD protocol: A review and first update , 2010, Ecological Modelling.
[90] David R. B. Stockwell,et al. Forecasting the Effects of Global Warming on Biodiversity , 2007 .
[91] Corey J A Bradshaw,et al. Synergies among extinction drivers under global change. , 2008, Trends in ecology & evolution.