Prediction of Conversion from Mild Cognitive Impairment to Alzheimer's Disease Using MRI and Structural Network Features

Optimized magnetic resonance imaging (MRI) features and abnormalities of brain network architectures may allow earlier detection and accurate prediction of the progression from mild cognitive impairment (MCI) to Alzheimer's disease (AD). In this study, we proposed a classification framework to distinguish MCI converters (MCIc) from MCI non-converters (MCInc) by using a combination of FreeSurfer-derived MRI features and nodal features derived from the thickness network. At the feature selection step, we first employed sparse linear regression with stability selection, for the selection of discriminative features in the iterative combinations of MRI and network measures. Subsequently the top K features of available combinations were selected as optimal features for classification. To obtain unbiased results, support vector machine (SVM) classifiers with nested cross validation were used for classification. The combination of 10 features including those from MRI and network measures attained accuracies of 66.04, 76.39, 74.66, and 73.91% for mixed conversion time, 6, 12, and 18 months before diagnosis of probable AD, respectively. Analysis of the diagnostic power of different time periods before diagnosis of probable AD showed that short-term prediction (6 and 12 months) achieved more stable and higher AUC scores compared with long-term prediction (18 months), with K-values from 1 to 30. The present results suggest that meaningful predictors composed of MRI and network measures may offer the possibility for early detection of progression from MCI to AD.

[1]  R. Tibshirani Regression Shrinkage and Selection via the Lasso , 1996 .

[2]  Hilkka Soininen,et al.  Prevalence of mild cognitive impairment: A population-based study in elderly subjects , 2000, Neurobiology of Aging.

[3]  A. Dale,et al.  Whole Brain Segmentation Automated Labeling of Neuroanatomical Structures in the Human Brain , 2002, Neuron.

[4]  M. Angermeyer,et al.  Mild cognitive impairment 1 – a review of prevalence, incidence and outcome according to current approaches , 2002, Acta psychiatrica Scandinavica.

[5]  R. Petersen Mild cognitive impairment as a diagnostic entity , 2004, Journal of internal medicine.

[6]  C. Jack,et al.  Mild cognitive impairment can be distinguished from Alzheimer disease and normal aging for clinical trials. , 2004, Archives of neurology.

[7]  Brigitte Landeau,et al.  Using voxel-based morphometry to map the structural changes associated with rapid conversion in MCI: A longitudinal MRI study , 2005, NeuroImage.

[8]  G. Frisoni,et al.  A voxel based morphometry study on mild cognitive impairment , 2004, Journal of Neurology, Neurosurgery & Psychiatry.

[9]  C. Jack,et al.  Alzheimer's Disease Neuroimaging Initiative , 2008 .

[10]  R. Petersen,et al.  Mild cognitive impairment , 2006, The Lancet.

[11]  Anders M. Dale,et al.  An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest , 2006, NeuroImage.

[12]  C. Stam,et al.  Small-world networks and functional connectivity in Alzheimer's disease. , 2006, Cerebral cortex.

[13]  Clifford R. Jack,et al.  Alzheimer's disease diagnosis in individual subjects using structural MR images: Validation studies , 2008, NeuroImage.

[14]  N. Meinshausen,et al.  Stability selection , 2008, 0809.2932.

[15]  Alan C. Evans,et al.  Automated cortical thickness measurements from MRI can accurately separate Alzheimer's patients from normal elderly controls , 2008, Neurobiology of Aging.

[16]  Nick C Fox,et al.  Amnestic Mild Cognitive Impairment: Structural MR Imaging Findings Predictive of Conversion to Alzheimer Disease , 2008, American Journal of Neuroradiology.

[17]  et al.,et al.  Spatial patterns of brain atrophy in MCI patients, identified via high-dimensional pattern classification, predict subsequent cognitive decline , 2008, NeuroImage.

[18]  C. Jack,et al.  MRI patterns of atrophy associated with progression to AD in amnestic mild cognitive impairment , 2008, Neurology.

[19]  Nick C Fox,et al.  The Alzheimer's disease neuroimaging initiative (ADNI): MRI methods , 2008, Journal of magnetic resonance imaging : JMRI.

[20]  Alan C. Evans,et al.  Structural Insights into Aberrant Topological Patterns of Large-Scale Cortical Networks in Alzheimer's Disease , 2008, The Journal of Neuroscience.

[21]  B T Hyman,et al.  Temporoparietal MR Imaging Measures of Atrophy in Subjects with Mild Cognitive Impairment That Predict Subsequent Diagnosis of Alzheimer Disease , 2009, American Journal of Neuroradiology.

[22]  Matthias L. Schroeter,et al.  Neural correlates of Alzheimer's disease and mild cognitive impairment: A systematic and quantitative meta-analysis involving 1351 patients , 2009, NeuroImage.

[23]  Christos Davatzikos,et al.  Baseline and longitudinal patterns of brain atrophy in MCI patients, and their use in prediction of short-term conversion to AD: Results from ADNI , 2009, NeuroImage.

[24]  Alan C. Evans,et al.  Neuronal Networks in Alzheimer's Disease , 2009, The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry.

[25]  O. Sporns,et al.  Complex brain networks: graph theoretical analysis of structural and functional systems , 2009, Nature Reviews Neuroscience.

[26]  Li Shen,et al.  Baseline MRI Predictors of Conversion from MCI to Probable AD in the ADNI Cohort , 2009, Current Alzheimer research.

[27]  G. Sandini,et al.  Graph theoretical analysis of magnetoencephalographic functional connectivity in Alzheimer's disease. , 2009, Brain : a journal of neurology.

[28]  Juha Koikkalainen,et al.  Differences in cortical thickness in healthy controls, subjects with mild cognitive impairment, and Alzheimer's disease patients: a longitudinal study. , 2010, Journal of Alzheimer's disease : JAD.

[29]  Edward T. Bullmore,et al.  SYSTEMS NEUROSCIENCE Original Research Article , 2009 .

[30]  Edward T. Bullmore,et al.  Network-based statistic: Identifying differences in brain networks , 2010, NeuroImage.

[31]  Nick C Fox,et al.  The clinical use of structural MRI in Alzheimer disease , 2010, Nature Reviews Neurology.

[32]  Tso-Jung Yen,et al.  Discussion on "Stability Selection" by Meinshausen and Buhlmann , 2010 .

[33]  Yuan Zhou,et al.  Abnormal Cortical Networks in Mild Cognitive Impairment and Alzheimer's Disease , 2010, PLoS Comput. Biol..

[34]  Jesse S. Jin,et al.  Identification of Conversion from Mild Cognitive Impairment to Alzheimer's Disease Using Multivariate Predictors , 2011, PloS one.

[35]  Pierrick Coupé,et al.  Prediction of Alzheimer’s disease in subjects with mild cognitive impairment using structural patterns of cortical thinning , 2011 .

[36]  Chih-Jen Lin,et al.  LIBSVM: A library for support vector machines , 2011, TIST.

[37]  D. Rueckert,et al.  Multi-Method Analysis of MRI Images in Early Diagnostics of Alzheimer's Disease , 2011, PloS one.

[38]  Shuiwang Ji,et al.  SLEP: Sparse Learning with Efficient Projections , 2011 .

[39]  Jian Wang,et al.  Alterations of whole-brain cortical area and thickness in mild cognitive impairment and Alzheimer's disease. , 2011, Journal of Alzheimer's disease : JAD.

[40]  Marie Chupin,et al.  Automatic classi fi cation of patients with Alzheimer ' s disease from structural MRI : A comparison of ten methods using the ADNI database , 2010 .

[41]  Xing Xie,et al.  Learning travel recommendations from user-generated GPS traces , 2011, TIST.

[42]  T. Goldberg,et al.  Utility of combinations of biomarkers, cognitive markers, and risk factors to predict conversion from mild cognitive impairment to Alzheimer disease in patients in the Alzheimer's disease neuroimaging initiative. , 2011, Archives of general psychiatry.

[43]  Eric Westman,et al.  Combining MRI and CSF measures for classification of Alzheimer's disease and prediction of mild cognitive impairment conversion , 2012, NeuroImage.

[44]  C. Jack,et al.  Prediction of conversion from mild cognitive impairment to Alzheimer's disease dementia based upon biomarkers and neuropsychological test performance , 2012, Neurobiology of Aging.

[45]  Yong Liu,et al.  Disrupted Small-World Brain Networks in Moderate Alzheimer's Disease: A Resting-State fMRI Study , 2012, PloS one.

[46]  Jieping Ye,et al.  Sparse learning and stability selection for predicting MCI to AD conversion using baseline ADNI data , 2012, BMC Neurology.

[47]  Huiguang He,et al.  Accurate prediction of AD patients using cortical thickness networks , 2012, Machine Vision and Applications.

[48]  Regina Berretta,et al.  Multivariate Protein Signatures of Pre-Clinical Alzheimer's Disease in the Alzheimer's Disease Neuroimaging Initiative (ADNI) Plasma Proteome Dataset , 2012, PloS one.

[49]  R Chen,et al.  Prediction of Conversion from Mild Cognitive Impairment to Alzheimer Disease Based on Bayesian Data Mining with Ensemble Learning , 2012, The neuroradiology journal.

[50]  He Li,et al.  Disrupted topological organization in white matter structural networks in amnestic mild cognitive impairment: relationship to subtype. , 2012, Radiology.

[51]  C. Stam,et al.  Alzheimer's disease: connecting findings from graph theoretical studies of brain networks , 2013, Neurobiology of Aging.

[52]  Y. Lui,et al.  Small-World Properties in Mild Cognitive Impairment and Early Alzheimer’s Disease: A Cortical Thickness MRI Study , 2013, ISRN geriatrics.

[53]  Vladimir Fonov,et al.  Prediction of Alzheimer's disease in subjects with mild cognitive impairment from the ADNI cohort using patterns of cortical thinning , 2013, NeuroImage.

[54]  Cornelis J. Stam,et al.  Single-Subject Gray Matter Graph Properties and Their Relationship with Cognitive Impairment in Early- and Late-Onset Alzheimer's Disease , 2014, Brain Connect..

[55]  Paul M. Thompson,et al.  Analysis of sampling techniques for imbalanced data: An n=648 ADNI study , 2014, NeuroImage.

[56]  Dinggang Shen,et al.  Inter-modality relationship constrained multi-modality multi-task feature selection for Alzheimer's Disease and mild cognitive impairment identification , 2014, NeuroImage.

[57]  Daoqiang Zhang,et al.  Topological graph kernel on multiple thresholded functional connectivity networks for mild cognitive impairment classification , 2014, Human brain mapping.

[58]  G. Ji,et al.  Changes in Thalamic Connectivity in the Early and Late Stages of Amnestic Mild Cognitive Impairment: A Resting-State Functional Magnetic Resonance Study from ADNI , 2015, PloS one.

[59]  Michael W. Weiner,et al.  Thickness network features for prognostic applications in dementia , 2015, Neurobiology of Aging.

[60]  N. Kandiah,et al.  Association between white matter hyperintensity and medial temporal atrophy at various stages of Alzheimer's disease , 2015, European journal of neurology.

[61]  Ling Li,et al.  Age-Related Inter-Region EEG Coupling Changes During the Control of Bottom–Up and Top–Down Attention , 2015, Front. Aging Neurosci..

[62]  Meng Wang,et al.  Differential Preparation Intervals Modulate Repetition Processes in Task Switching: An ERP Study , 2016, Front. Hum. Neurosci..