Cloning and characterization of a novel human histone deacetylase, HDAC8.

Histone deacetylases (HDACs) are a growing family of enzymes implicated in transcriptional regulation by affecting the acetylation state of core histones in the nucleus of cells. HDACs are known to have key roles in the regulation of cell proliferation [Brehm, Miska, McCance, Reid, Bannister and Kouzarides (1998) Nature (London) 391, 597-600], and aberrant recruitment of an HDAC complex has been shown to be a key step in the mechanism of cell transformation in acute promyelocytic leukaemia [Grignani, De Matteis, Nervi, Tomassoni, Gelmetti, Cioce, Fanelli, Ruthardt, Ferrara, Zamir et al. (1998) Nature (London) 391, 815-818; Lin, Nagy, Inoue, Shao, Miller and Evans (1998), Nature (London) 391, 811-814]. Here we present the complete nucleotide sequence of a cDNA clone, termed HDAC8, that encodes a protein product with similarity to the RPD3 class (I) of HDACs. The predicted 377-residue HDAC8 product contains a shorter C-terminal extension relative to other members of its class. After expression in two cell systems, immunopurified HDAC8 is shown to possess trichostatin A- and sodium butyrate-inhibitable HDAC activity on histone H4 peptide substrates as well as on core histones. Expression profiling reveals the expression of HDAC8 to various degrees in every tissue tested and also in several tumour lines. Mutation of two adjacent histidine residues within the predicted active site severely decreases activity, confirming these residues as important for HDAC8 enzyme activity. Finally, linkage analysis after radiation hybrid mapping has localized HDAC8 to chromosomal position Xq21.2-Xq21.3. These results confirm HDAC8 as a new member of the HDAC family.

[1]  S. Schreiber,et al.  A Mammalian Histone Deacetylase Related to the Yeast Transcriptional Regulator Rpd3p , 1996, Science.

[2]  R. Evans,et al.  Isolation of a novel histone deacetylase reveals that class I and class II deacetylases promote SMRT-mediated repression. , 2000, Genes & development.

[3]  S. Jones,et al.  Histone deacetylase inhibitors as potential anti-skin cancer agents. , 1999, Cancer research.

[4]  S. Schreiber,et al.  A role for histone deacetylase activity in HDAC1-mediated transcriptional repression. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[5]  S. Minucci,et al.  Aberrant Recruitment of the Nuclear Receptor Corepressor-Histone Deacetylase Complex by the Acute Myeloid Leukemia Fusion Partner ETO , 1998, Molecular and Cellular Biology.

[6]  L. Magnaghi-Jaulin,et al.  Retinoblastoma protein represses transcription by recruiting a histone deacetylase , 1998, Nature.

[7]  S. Minucci,et al.  Fusion proteins of the retinoic acid receptor-α recruit histone deacetylase in promyelocytic leukaemia , 1998, Nature.

[8]  L. Chin,et al.  Role for N-CoR and histone deacetylase in Sin3-mediated transcriptional repression , 1997, nature.

[9]  P. Marks,et al.  Structures of a histone deacetylase homologue bound to the TSA and SAHA inhibitors , 1999, Nature.

[10]  R. Lotan,et al.  Modulation of galectin‐1 content in human head and neck squamous carcinoma cells by sodium butyrate , 1998, International journal of cancer.

[11]  T. Tsuruo,et al.  A synthetic inhibitor of histone deacetylase, MS-27-275, with marked in vivo antitumor activity against human tumors. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[12]  S. Meng,et al.  p21WAF1 is required for butyrate-mediated growth inhibition of human colon cancer cells , 1998 .

[13]  R. Yarden,et al.  BRCA1 interacts with components of the histone deacetylase complex. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[14]  C. Van Lint,et al.  Characterization of a human RPD3 ortholog, HDAC3. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[15]  B. Migeon,et al.  Molecular characterization of a deleted X chromosome (Xq13.3-Xq21.31) exhibiting random X inactivation , 1995, Somatic cell and molecular genetics.

[16]  M. Grunstein,et al.  HDA1 and HDA3 Are Components of a Yeast Histone Deacetylase (HDA) Complex* , 1996, The Journal of Biological Chemistry.

[17]  M. Vidal,et al.  RPD3 encodes a second factor required to achieve maximum positive and negative transcriptional states in Saccharomyces cerevisiae , 1991, Molecular and cellular biology.

[18]  S. Schreiber,et al.  Three proteins define a class of human histone deacetylases related to yeast Hda1p. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[19]  A. Dawson,et al.  Functional mosaic trisomy of 1q12 1q21 resulting from X‐autosome insertion translocation with random inactivation , 1998, Clinical Genetics.

[20]  L. Cioé,et al.  Differential expression of the globin genes in human leukemia K562(S) cells induced to differentiate by hemin or butyric acid. , 1981, Cancer research.

[21]  Wen‐Ming Yang,et al.  Histone Deacetylases Associated with the mSin3 Corepressor Mediate Mad Transcriptional Repression , 1997, Cell.

[22]  T. Curran,et al.  Role of DNA 5-methylcytosine transferase in cell transformation by fos. , 1999, Science.

[23]  Tony Kouzarides,et al.  Retinoblastoma protein recruits histone deacetylase to repress transcription , 1998, Nature.

[24]  A. Eastman,et al.  Apoptotic death in adenocarcinoma cell lines induced by butyrate and other histone deacetylase inhibitors. , 1997, Biochemical pharmacology.

[25]  V. Najfeld,et al.  Genomic organization and chromosomal localization of the human histone deacetylase 3 gene. , 1999, Genomics.

[26]  J. Davie,et al.  Histone Acetylation Is Required to Maintain the Unfolded Nucleosome Structure Associated with Transcribing DNA* , 1998, The Journal of Biological Chemistry.

[27]  P. Sharp,et al.  Promoter-specific hypoacetylation of X-inactivated genes. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[28]  S. Fischkoff,et al.  Factors responsible for variable reported lineages of HL-60 cells induced to mature with butyric acid. , 1989, Cancer research.

[29]  T. Hoshino,et al.  ETO, fusion partner in t(8;21) acute myeloid leukemia, represses transcription by interaction with the human N-CoR/mSin3/HDAC1 complex. , 1998, Proceedings of the National Academy of Sciences of the United States of America.

[30]  M. Grunstein Histone acetylation in chromatin structure and transcription , 1997, Nature.

[31]  J. Graves,et al.  Histone underacetylation is an ancient component of mammalian X chromosome inactivation. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[32]  N. Brockdorff,et al.  A developmental switch in H4 acetylation upstream of Xist plays a role in X chromosome inactivation , 1999, The EMBO journal.

[33]  P. Higgins,et al.  Butyrate-induced cytoarchitectural reorganization of Mallory body-containing rat hepatic tumor cells. , 1987, Journal of the National Cancer Institute.

[34]  K. Graham,et al.  Sodium butyrate induces differentiation in breast cancer cell lines expressing the estrogen receptor , 1988, Journal of cellular physiology.

[35]  C. Larsson,et al.  Human histone deacetylase 2, HDAC2 (Human RPD3), is localized to 6q21 by radiation hybrid mapping. , 1998, Genomics.

[36]  Ya-Li Yao,et al.  Isolation and Characterization of cDNAs Corresponding to an Additional Member of the Human Histone Deacetylase Gene Family* , 1997, The Journal of Biological Chemistry.

[37]  P. Marks,et al.  Hybrid polar histone deacetylase inhibitor induces apoptosis and CD95/CD95 ligand expression in human neuroblastoma. , 1999, Cancer research.

[38]  D. Dean,et al.  Rb Interacts with Histone Deacetylase to Repress Transcription , 1998, Cell.

[39]  J. Hicks,et al.  Effects of sodium butyrate and dimethylsulfoxide on biochemical properties of human colon cancer cells , 1980, Cancer.

[40]  S. Ho,et al.  Gene splicing by overlap extension: tailor-made genes using the polymerase chain reaction. , 2013, BioTechniques.

[41]  S. Inoue,et al.  Role of the histone deacetylase complex in acute promyelocytic leukaemia , 1998, Nature.

[42]  P. Pandolfi,et al.  Therapeutic targeting of transcription in acute promyelocytic leukemia by use of an inhibitor of histone deacetylase. , 1998, Journal of the National Cancer Institute.

[43]  N. Nomura,et al.  A New Family of Human Histone Deacetylases Related toSaccharomyces cerevisiae HDA1p* , 1999, The Journal of Biological Chemistry.

[44]  J. Winer,et al.  Development and validation of real-time quantitative reverse transcriptase-polymerase chain reaction for monitoring gene expression in cardiac myocytes in vitro. , 1999, Analytical biochemistry.