Clustering of 770,000 genomes reveals post-colonial population structure of North America
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Ross E. Curtis | Eurie L. Hong | Jake K. Byrnes | Natalie M. Myres | C. Ball | P. Carbonetto | J. Byrnes | Eyal Elyashiv | Keith Noto | H. Guturu | Julie M. Granka | Eunjung Han | Yong Wang | Amir R. Kermany | Mathew Barber | K. Rand | Shiya Song | Theodore Roman | E. Battat | E. Hong | K. Chahine | J. Granka
[1] Alan R. Templeton,et al. Inference and Analysis of Population Structure Using Genetic Data and Network Theory , 2015, Genetics.
[2] Scott M. Williams,et al. The Great Migration and African-American Genomic Diversity , 2015, bioRxiv.
[3] Gabor T. Marth,et al. A global reference for human genetic variation , 2015, Nature.
[4] Mattias Jakobsson,et al. Genomic evidence for the Pleistocene and recent population history of Native Americans , 2015, Science.
[5] D. Reich,et al. Genetic evidence for two founding populations of the Americas , 2015, Nature.
[6] V. Pascali,et al. Unravelling the hidden ancestry of American admixed populations , 2015, Nature Communications.
[7] M. Pirinen,et al. The fine-scale genetic structure of the British population , 2015, Nature.
[8] David Reich,et al. The Genetic Ancestry of African Americans, Latinos, and European Americans across the United States , 2015, American journal of human genetics.
[9] Kenneth Offit,et al. Sequencing an Ashkenazi reference panel supports population-targeted personal genomics and illuminates Jewish and European origins , 2014, Nature Communications.
[10] Pieter B. T. Neerincx,et al. Supplementary Information Whole-genome sequence variation , population structure and demographic history of the Dutch population , 2022 .
[11] Christopher R. Gignoux,et al. The genetics of Mexico recapitulates Native American substructure and affects biomedical traits , 2014, Science.
[12] William Wheeler,et al. Rare variants of large effect in BRCA2 and CHEK2 affect risk of lung cancer , 2014, Nature Genetics.
[13] D. Falush,et al. A Genetic Atlas of Human Admixture History , 2014, Science.
[14] Cory Y. McLean,et al. Reducing Pervasive False-Positive Identical-by-Descent Segments Detected by Large-Scale Pedigree Analysis , 2013, Molecular biology and evolution.
[15] Claudia Moreau,et al. Genome-wide patterns of identity-by-descent sharing in the French Canadian founder population , 2013, European Journal of Human Genetics.
[16] Michael Y. Galperin,et al. The COMBREX Project: Design, Methodology, and Initial Results , 2013, PLoS biology.
[17] Jake K. Byrnes,et al. Reconstructing the Population Genetic History of the Caribbean , 2013, PLoS genetics.
[18] B. Browning,et al. Improving the Accuracy and Efficiency of Identity-by-Descent Detection in Population Data , 2013, Genetics.
[19] Peter L. Ralph,et al. The Geography of Recent Genetic Ancestry across Europe , 2012, PLoS biology.
[20] Kenny Q. Ye,et al. An integrated map of genetic variation from 1,092 human genomes , 2012, Nature.
[21] David Comas,et al. North African Jewish and non-Jewish populations form distinctive, orthogonal clusters , 2012, Proceedings of the National Academy of Sciences.
[22] Jasmin Divers,et al. Population Structure of Hispanics in the United States: The Multi-Ethnic Study of Atherosclerosis , 2012, PLoS genetics.
[23] Alexander Gusev,et al. The architecture of long-range haplotypes shared within and across populations. , 2012, Molecular biology and evolution.
[24] D. Falush,et al. Inference of Population Structure using Dense Haplotype Data , 2012, PLoS genetics.
[25] M. Newman. Communities, modules and large-scale structure in networks , 2011, Nature Physics.
[26] B. Browning,et al. Haplotype phasing: existing methods and new developments , 2011, Nature Reviews Genetics.
[27] Gary K. Chen,et al. Genome-wide association study of prostate cancer in men of African ancestry identifies a susceptibility locus at 17q21 , 2011, Nature Genetics.
[28] Jonathan W. Berry,et al. Tolerating the community detection resolution limit with edge weighting. , 2008, Physical review. E, Statistical, nonlinear, and soft matter physics.
[29] Jun Zhang,et al. Ancestral Informative Marker Selection and Population Structure Visualization Using Sparse Laplacian Eigenfunctions , 2010, PloS one.
[30] C. Durniak,et al. Soliton interaction in a complex plasma. , 2010, Physical review. E, Statistical, nonlinear, and soft matter physics.
[31] H. Ostrer,et al. Genome-wide patterns of population structure and admixture among Hispanic/Latino populations , 2010, Proceedings of the National Academy of Sciences.
[32] Benjamin H. Good,et al. Performance of modularity maximization in practical contexts. , 2009, Physical review. E, Statistical, nonlinear, and soft matter physics.
[33] Kathryn Roeder,et al. A SPECTRAL GRAPH APPROACH TO DISCOVERING GENETIC ANCESTRY. , 2009, The annals of applied statistics.
[34] Stephen L. Hauser,et al. Genome-wide patterns of population structure and admixture in West Africans and African Americans , 2009, Proceedings of the National Academy of Sciences.
[35] David H. Alexander,et al. Fast model-based estimation of ancestry in unrelated individuals. , 2009, Genome research.
[36] Santo Fortunato,et al. Community detection in graphs , 2009, ArXiv.
[37] Alexander Gusev,et al. Whole population, genome-wide mapping of hidden relatedness. , 2009, Genome research.
[38] Amit R. Indap,et al. Genes mirror geography within Europe , 2008, Nature.
[39] Jean-Loup Guillaume,et al. Fast unfolding of communities in large networks , 2008, 0803.0476.
[40] David Reich,et al. Discerning the Ancestry of European Americans in Genetic Association Studies , 2007, PLoS genetics.
[41] Martin Rosvall,et al. Maps of random walks on complex networks reveal community structure , 2007, Proceedings of the National Academy of Sciences.
[42] B. Browning,et al. Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering. , 2007, American journal of human genetics.
[43] Ulrike von Luxburg,et al. A tutorial on spectral clustering , 2007, Stat. Comput..
[44] Zhaohui S. Qin,et al. A second generation human haplotype map of over 3.1 million SNPs , 2007, Nature.
[45] Réka Albert,et al. Near linear time algorithm to detect community structures in large-scale networks. , 2007, Physical review. E, Statistical, nonlinear, and soft matter physics.
[46] Michael W. Mahoney,et al. PCA-Correlated SNPs for Structure Identification in Worldwide Human Populations , 2007, PLoS genetics.
[47] D. Reich,et al. Population Structure and Eigenanalysis , 2006, PLoS genetics.
[48] Gábor Csárdi,et al. The igraph software package for complex network research , 2006 .
[49] L. Cavalli-Sforza. The Human Genome Diversity Project: past, present and future , 2005, Nature Reviews Genetics.
[50] A. Zeileis. Econometric Computing with HC and HAC Covariance Matrix Estimators , 2004 .
[51] Kurt Hornik,et al. kernlab - An S4 Package for Kernel Methods in R , 2004 .
[52] Yves Roby,et al. The Franco-Americans of New England : dreams and realities , 2004 .
[53] Mikhail Belkin,et al. Laplacian Eigenmaps for Dimensionality Reduction and Data Representation , 2003, Neural Computation.
[54] Jonathan Scott Friedlaender,et al. A Human Genome Diversity Cell Line Panel , 2002, Science.
[55] Bernhard Schölkopf,et al. Nonlinear Component Analysis as a Kernel Eigenvalue Problem , 1998, Neural Computation.
[56] T. G. Moore. Eastern Kentucky as a Model of Appalachia: The Role of Literary Images , 2013 .
[57] B. Weir,et al. ESTIMATING F‐STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE , 1984, Evolution; international journal of organic evolution.
[58] T McLellan,et al. Genetic distances between the Utah Mormons and related populations. , 1984, American journal of human genetics.