Functional proteomic and structural insights into molecular recognition in the nitrilase family enzymes.
暂无分享,去创建一个
R. Stevens | A. Olson | G. Morris | K. Saikatendu | B. Cravatt | R. Huey | M. Bracey | K. Barglow
[1] B. Maras,et al. Is pantetheinase the actual identity of mouse and human vanin‐1 proteins? , 1999, FEBS letters.
[2] B. Cravatt,et al. Activity-based protein profiling: from enzyme chemistry to proteomic chemistry. , 2008, Annual review of biochemistry.
[3] L. Lally. The CCP 4 Suite — Computer programs for protein crystallography , 1998 .
[4] D. Iliopoulos,et al. Biological Functions of Mammalian Nit1, the Counterpart of the Invertebrate NitFhit Rosetta Stone Protein, a Possible Tumor Suppressor* , 2006, Journal of Biological Chemistry.
[5] C. Brenner,et al. The nitrilase superfamily: classification, structure and function , 2001, Genome Biology.
[6] M F Sanner,et al. Python: a programming language for software integration and development. , 1999, Journal of molecular graphics & modelling.
[7] Matthew Bogyo,et al. Identification of proteases that regulate erythrocyte rupture by the malaria parasite Plasmodium falciparum. , 2008, Nature chemical biology.
[8] B. Cravatt,et al. Mechanism‐Based Profiling of Enzyme Families , 2006 .
[9] D S Goodsell,et al. Automated docking of flexible ligands: Applications of autodock , 1996, Journal of molecular recognition : JMR.
[10] A G Murzin,et al. SCOP: a structural classification of proteins database for the investigation of sequences and structures. , 1995, Journal of molecular biology.
[11] P. Bork,et al. A new family of carbon‐nitrogen hydrolases , 1994, Protein science : a publication of the Protein Society.
[12] B. Cravatt,et al. Discovering disease-associated enzymes by proteome reactivity profiling. , 2004, Chemistry & biology.
[13] C. Brenner,et al. The Reported Human NADsyn2 Is Ammonia-dependent NAD Synthetase from a Pseudomonad* , 2003, Journal of Biological Chemistry.
[14] Sherry L. Niessen,et al. Proteomic profiling of metalloprotease activities with cocktails of active-site probes , 2006, Nature chemical biology.
[15] Dong-Eun Kim,et al. A Determinant Residue of Substrate Specificity in Nitrilase from Rhodococcus rhodochrous ATCC 33278 for Aliphatic and Aromatic Nitriles , 2008 .
[16] C. Brenner. Catalysis in the nitrilase superfamily. , 2002, Current opinion in structural biology.
[17] N. Ariel,et al. The 'aromatic patch' of three proximal residues in the human acetylcholinesterase active centre allows for versatile interaction modes with inhibitors. , 1998, The Biochemical journal.
[18] R. Tata,et al. Support for a three-dimensional structure predicting a Cys-Glu-Lys catalytic triad for Pseudomonas aeruginosa amidase comes from site-directed mutagenesis and mutations altering substrate specificity. , 2002, The Biochemical journal.
[19] G. Murshudov,et al. Refinement of macromolecular structures by the maximum-likelihood method. , 1997, Acta crystallographica. Section D, Biological crystallography.
[20] I. Tanaka,et al. Crystal structure of hypothetical protein PH0642 from Pyrococcus horikoshii at 1.6Å resolution , 2004, Proteins.
[21] David S. Goodsell,et al. Distributed automated docking of flexible ligands to proteins: Parallel applications of AutoDock 2.4 , 1996, J. Comput. Aided Mol. Des..
[22] Z. Otwinowski,et al. Processing of X-ray diffraction data collected in oscillation mode. , 1997, Methods in enzymology.
[23] Rodrigo Lopez,et al. Multiple sequence alignment with the Clustal series of programs , 2003, Nucleic Acids Res..
[24] B. Cravatt,et al. Activity-based protein profiling: the serine hydrolases. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[25] C. Sander,et al. Protein structure comparison by alignment of distance matrices. , 1993, Journal of molecular biology.
[26] J. Piškur,et al. The crystal structure of beta-alanine synthase from Drosophila melanogaster reveals a homooctameric helical turn-like assembly. , 2008, Journal of molecular biology.
[27] F. Studier,et al. Crystal structure of a putative CN hydrolase from yeast , 2003, Proteins.
[28] W. Hsu,et al. CRYSTAL STRUCTURE ANALYSIS OF N-CARBAMoYL-D-AMINO-ACID AMIDOHYDROLASE , 2001 .
[29] Jay Painter,et al. Electronic Reprint Biological Crystallography Optimal Description of a Protein Structure in Terms of Multiple Groups Undergoing Tls Motion Biological Crystallography Optimal Description of a Protein Structure in Terms of Multiple Groups Undergoing Tls Motion , 2005 .
[30] A. Saghatelian,et al. An enzyme that regulates ether lipid signaling pathways in cancer annotated by multidimensional profiling. , 2006, Chemistry & biology.
[31] Y. Pekarsky,et al. Crystal structure of the worm NitFhit Rosetta Stone protein reveals a Nit tetramer binding two Fhit dimers , 2000, Current Biology.
[32] B. Cravatt,et al. Substrate mimicry in an activity-based probe that targets the nitrilase family of enzymes. , 2006, Angewandte Chemie.
[33] C. Chien,et al. Growth inhibitory effect of the human NIT2 gene and its allelic imbalance in cancers , 2007, The FEBS journal.
[34] A. V. van Kuilenburg,et al. beta-Ureidopropionase deficiency: an inborn error of pyrimidine degradation associated with neurological abnormalities. , 2004, Human molecular genetics.
[35] R J Read,et al. Pushing the boundaries of molecular replacement with maximum likelihood. , 2003, Acta crystallographica. Section D, Biological crystallography.
[36] A. Burlingame,et al. Chemical Approaches for Functionally Probing the Proteome* , 2002, Molecular & Cellular Proteomics.
[37] C. Brenner,et al. Eukaryotic NAD+ Synthetase Qns1 Contains an Essential, Obligate Intramolecular Thiol Glutamine Amidotransferase Domain Related to Nitrilase* , 2003, Journal of Biological Chemistry.
[38] B. Maras,et al. Pantetheinase activity of membrane‐bound Vanin‐1: lack of free cysteamine in tissues of Vanin‐1 deficient mice , 2000, FEBS letters.