Survey of the year 2008: applications of isothermal titration calorimetry

Isothermal titration calorimetry (ITC) is a fast, accurate and label‐free method for measuring the thermodynamics and binding affinities of molecular associations in solution. Because the method will measure any reaction that results in a heat change, it is applicable to many different fields of research from biomolecular science, to drug design and materials engineering, and can be used to measure binding events between essentially any type of biological or chemical ligand. ITC is the only method that can directly measure binding energetics including Gibbs free energy, enthalpy, entropy and heat capacity changes. Not only binding thermodynamics but also catalytic reactions, conformational rearrangements, changes in protonation and molecular dissociations can be readily quantified by performing only a small number of ITC experiments. In this review, we highlight some of the particularly interesting reports from 2008 employing ITC, with a particular focus on protein interactions with other proteins, nucleic acids, lipids and drugs. As is tradition in these reviews we have not attempted a comprehensive analysis of all 500 papers using ITC, but emphasize those reports that particularly captured our interest and that included more thorough discussions we consider exemplify the power of the technique and might serve to inspire other users. Copyright © 2010 John Wiley & Sons, Ltd.

[1]  J. Neira,et al.  The family 52 beta-xylosidase from Geobacillus stearothermophilus is a dimer: structural and biophysical characterization of a glycoside hydrolase. , 2008, Biochimica et biophysica acta.

[2]  O. Issinger,et al.  The interaction of CK2α and CK2β, the subunits of protein kinase CK2, requires CK2β in a preformed conformation and is enthalpically driven , 2008, Protein science : a publication of the Protein Society.

[3]  A. Saboury,et al.  A direct calorimetric determination of denaturation enthalpy for lysozyme in sodium dodecyl sulfate. , 2008, Colloids and surfaces. B, Biointerfaces.

[4]  P. Workman,et al.  Modern cancer drug discovery: integrating targets, technologies and treatments , 2008 .

[5]  L. Podust,et al.  Mycobacterium Tuberculosis Cyp130:Crystal Mycobacterium Tuberculosis Cyp130: Crystal Structure, Biophysical Characterization, and Interactions with Antifungal Azole Drugs. , 2007 .

[6]  Xinghai Shen,et al.  Spectral and photophysical studies on the inclusion complexation between Triton X-100 and β-cyclodextrin: A competitive method using a substituted 3H-indole probe , 2008 .

[7]  K. Keinänen,et al.  Somatostatin receptor subtype 1 is a PDZ ligand for synapse-associated protein 97 and a potential regulator of growth cone dynamics , 2008, Neuroscience.

[8]  L. McIntosh,et al.  Structural characterization of the type-III pilot-secretin complex from Shigella flexneri. , 2008, Structure.

[9]  V. Bychkova,et al.  Phospholipid membranes affect tertiary structure of the soluble cytochrome b5 heme-binding domain. , 2008, Biochimica et biophysica acta.

[10]  J. Malm,et al.  Zn2+ binding to human calbindin D28k and the role of histidine residues , 2008, Protein science : a publication of the Protein Society.

[11]  Meiwen Cao,et al.  Decompaction of cationic gemini surfactant-induced DNA condensates by beta-cyclodextrin or anionic surfactant. , 2008, The journal of physical chemistry. B.

[12]  S. Maiti,et al.  Binding of berberine to human telomeric quadruplex – spectroscopic, calorimetric and molecular modeling studies , 2008, The FEBS journal.

[13]  Christoph A. Schalley,et al.  Analytical methods in supramolecular chemistry , 2006 .

[14]  Caleb B. McDonald,et al.  Structural basis of the differential binding of the SH3 domains of Grb2 adaptor to the guanine nucleotide exchange factor Sos1. , 2008, Archives of biochemistry and biophysics.

[15]  G. Doncel,et al.  Surfactants as Microbicidal Contraceptives: A Calorimetric Study of Partitioning and Translocation in Model Membrane Systems , 2008 .

[16]  B. Farmer,et al.  Fragment-Based Drug Discovery , 2008 .

[17]  M. Siddiq,et al.  Energetics of binding and protein unfolding upon amphiphilic drug complexation with a globular protein in different aqueous media. , 2008, Colloids and surfaces. B, Biointerfaces.

[18]  Angeles Manresa,et al.  Thermodynamic and structural changes associated with the interaction of a dirhamnolipid biosurfactant with bovine serum albumin. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[19]  R. Kini,et al.  A universal method for fishing target proteins from mixtures of biomolecules using isothermal titration calorimetry , 2008, Protein science : a publication of the Protein Society.

[20]  Ashutosh Chilkoti,et al.  Peptide-based Biopolymers in Biomedicine and Biotechnology. , 2008, Materials science & engineering. R, Reports : a review journal.

[21]  Jaka Sunarso,et al.  Mixed ionic-electronic conducting (MIEC) ceramic-based membranes for oxygen separation , 2008 .

[22]  M. Hinds,et al.  Structural plasticity underpins promiscuous binding of the prosurvival protein A1. , 2008, Structure.

[23]  J. Aster,et al.  Mutational and energetic studies of Notch 1 transcription complexes. , 2008, Journal of molecular biology.

[24]  R. Teasdale,et al.  Structure of Vps26B and Mapping of its Interaction with the Retromer Protein Complex , 2008, Traffic.

[25]  P. Jurcevic,et al.  Additive action of two or more solutes on lipid membranes. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[26]  G. Ponchel,et al.  Synthesis and ITC characterization of novel nanoparticles constituted by poly(γ‐benzyl L‐glutamate)‐β‐cyclodextrin , 2008, Journal of molecular recognition : JMR.

[27]  Gerhard Klebe,et al.  Merging the binding sites of aldose and aldehyde reductase for detection of inhibitor selectivity-determining features. , 2008, Journal of molecular biology.

[28]  Marwen Naïm,et al.  Molecular dynamics-solvated interaction energy studies of protein-protein interactions: the MP1-p14 scaffolding complex. , 2008, Journal of molecular biology.

[29]  A. Späth,et al.  Utilizing reversible copper(II) peptide coordination in a sequence-selective luminescent receptor. , 2008, Chemistry.

[30]  E. Freire Do enthalpy and entropy distinguish first in class from best in class? , 2008, Drug discovery today.

[31]  Luigi Martino,et al.  Stability and binding properties of a modified thrombin binding aptamer. , 2008, Biophysical journal.

[32]  D. Goldenberg,et al.  Functional and structural roles of the Cys14-Cys38 disulfide of bovine pancreatic trypsin inhibitor. , 2008, Journal of molecular biology.

[33]  J. Sturtevant,et al.  Significant discrepancies between van't Hoff and calorimetric enthalpies. III. , 1997, Biophysical chemistry.

[34]  Anne-Claude Gavin,et al.  The social network of a cell: recent advances in interactome mapping. , 2008, Biotechnology annual review.

[35]  K. Dietz,et al.  Thermodynamics of the dimer-decamer transition of reduced human and plant 2-cys peroxiredoxin. , 2008, Biochemistry.

[36]  D. Engelman,et al.  Bilayer interactions of pHLIP, a peptide that can deliver drugs and target tumors. , 2008, Biophysical journal.

[37]  A. Surolia,et al.  Defining substrate interactions with calreticulin: an isothermal titration calorimetric study , 2008, Glycoconjugate Journal.

[38]  J. Stroud,et al.  Crystal structure of NFAT bound to the HIV-1 LTR tandem kappaB enhancer element. , 2007, Structure.

[39]  N. Buurma,et al.  Calorimetric and spectroscopic studies of Hoechst 33258: self-association and binding to non-cognate DNA. , 2008, Journal of molecular biology.

[40]  Tom Coenye,et al.  Polypropylene grafted with smart polymers (PNIPAAm/PAAc) for loading and controlled release of vancomycin. , 2008, European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V.

[41]  Gulden Camci-Unal,et al.  Thermodynamics of binding of divalent magnesium and manganese to uridine phosphates: implications for diabetes-related hypomagnesaemia and carbohydrate biocatalysis , 2008, Chemistry Central journal.

[42]  I. Tanaka,et al.  Structural and functional characterization of the LldR from Corynebacterium glutamicum: a transcriptional repressor involved in l-lactate and sugar utilization , 2008, Nucleic acids research.

[43]  D. Cahill,et al.  Calmodulin binding to the polybasic C-termini of STIM proteins involved in store-operated calcium entry. , 2008, Biochemistry.

[44]  B. N. Murthy,et al.  SPR and ITC determination of the kinetics and the thermodynamics of bivalent versus monovalent sugar ligand–lectin interactions , 2008, Glycoconjugate Journal.

[45]  P. Corbett,et al.  Exploring the relation between amplification and binding in dynamic combinatorial libraries of macrocyclic synthetic receptors in water. , 2008, Chemistry.

[46]  Nicholas N. Shaw,et al.  Recognition of the unique structure of DNA:RNA hybrids. , 2008, Biochimie.

[47]  Jose C. Martínez,et al.  Analysis of the thermodynamics of binding of an SH3 domain to proline-rich peptides using a chimeric fusion protein. , 2008, Journal of molecular biology.

[48]  Julián Valero,et al.  Binding to protein surfaces by supramolecular multivalent scaffolds. , 2008, Current opinion in chemical biology.

[49]  E. Katoh,et al.  LysM Domains from Pteris ryukyuensis Chitinase-A , 2008, Journal of Biological Chemistry.

[50]  N. Kishore,et al.  Complexation of beta-lactam antibiotic drug carbenicillin to bovine serum albumin: energetics and conformational studies. , 2008, Biopolymers.

[51]  A. Matte,et al.  Structure of [NiFe] Hydrogenase Maturation Protein HypE from Escherichia coli and Its Interaction with HypF , 2007, Journal of bacteriology.

[52]  K. Tsumoto,et al.  Thermodynamic analysis reveals that GTP binding affects the interaction between the alpha- and gamma-subunits of translation initiation factor 2. , 2008, Biochemical and biophysical research communications.

[53]  Md. Faiz Ahmad,et al.  Selective Cu2+ binding, redox silencing, and cytoprotective effects of the small heat shock proteins alphaA- and alphaB-crystallin. , 2008, Journal of molecular biology.

[54]  K. Christopher Garcia,et al.  Molecular and Structural Basis of Cytokine Receptor Pleiotropy in the Interleukin-4/13 System , 2008, Cell.

[55]  F. Maley,et al.  Role of an invariant lysine residue in folate binding on Escherichia coli thymidylate synthase: calorimetric and crystallographic analysis of the K48Q mutant. , 2008, The international journal of biochemistry & cell biology.

[56]  N. Buurma,et al.  The dichotomy in the DNA-binding behaviour of ruthenium(II) complexes bearing benzoxazole and benzothiazole groups. , 2008, Journal of inorganic biochemistry.

[57]  P. Evans,et al.  Molecular Basis for the Sorting of the SNARE VAMP7 into Endocytic Clathrin-Coated Vesicles by the ArfGAP Hrb , 2008, Cell.

[58]  Zbyszek Otwinowski,et al.  Crystal structures of the effector‐binding domain of repressor Central glycolytic gene Regulator from Bacillus subtilis reveal ligand‐induced structural changes upon binding of several glycolytic intermediates , 2008, Molecular microbiology.

[59]  Robert T Sauer,et al.  Asymmetric nucleotide transactions of the HslUV protease. , 2008, Journal of molecular biology.

[60]  M. Record,et al.  DNA binding mode transitions of Escherichia coli HU(alphabeta): evidence for formation of a bent DNA--protein complex on intact, linear duplex DNA. , 2008, Journal of molecular biology.

[61]  W. Wilson,et al.  Heterocyclic diamidine interactions at AT base pairs in the DNA minor groove: effects of heterocycle differences, DNA AT sequence and length. , 2008, Journal of Physical Chemistry B.

[62]  Christine Ziegler,et al.  1.55 A structure of the ectoine binding protein TeaA of the osmoregulated TRAP-transporter TeaABC from Halomonas elongata. , 2008, Biochemistry.

[63]  C. Hunter,et al.  Evidence for partially bound states in cooperative molecular recognition interfaces. , 2008, Journal of the American Chemical Society.

[64]  A. Mesecar,et al.  The structures of T87I phosphono-CheY and T87I/Y106W phosphono-CheY help to explain their binding affinities to the FliM and CheZ peptides. , 2008, Archives of biochemistry and biophysics.

[65]  R. Batey,et al.  Ligand-dependent folding of the three-way junction in the purine riboswitch. , 2008, RNA.

[66]  N. Ferguson,et al.  Moving towards high-resolution descriptions of the molecular interactions and structural rearrangements of the human hepatitis B core protein. , 2008, Journal of molecular biology.

[67]  M. Lafleur,et al.  Binding of bovine seminal plasma protein BSP-A1/-A2 to model membranes: lipid specificity and effect of the temperature. , 2008, Biochimica et biophysica acta.

[68]  Zbyszek Otwinowski,et al.  Crystal structure and putative function of small Toprim domain‐containing protein from Bacillus stearothermophilus , 2007, Proteins.

[69]  B. Dobner,et al.  Helical nanofibers of self-assembled bipolar phospholipids as template for gold nanoparticles. , 2008, The journal of physical chemistry. B.

[70]  J. Boutin,et al.  Kinetic, thermodynamic and X-ray structural insights into the interaction of melatonin and analogues with quinone reductase 2. , 2008, The Biochemical journal.

[71]  F. M. Gama,et al.  Self-aggregation of hydrophobically modified dextrin and their interaction with surfactant , 2008 .

[72]  M. Ehrenberg,et al.  The pretranslocation ribosome is targeted by GTP-bound EF-G in partially activated form , 2008, Proceedings of the National Academy of Sciences.

[73]  Thilo Stehle,et al.  Structural basis of GM1 ganglioside recognition by simian virus 40 , 2008, Proceedings of the National Academy of Sciences.

[74]  E. LaVoie,et al.  Targeting human telomeric G-quadruplex DNA with oxazole-containing macrocyclic compounds. , 2008, Biochimie.

[75]  H. Hasse,et al.  Microcalorimetric study of adsorption of human monoclonal antibodies on cation exchange chromatographic materials. , 2008, Journal of chromatography. A.

[76]  J. Gruschus,et al.  Dynamic interaction between Arf GAP and PH domains of ASAP1 in the regulation of GAP activity. , 2008, Cellular signalling.

[77]  E. Strauss,et al.  Structural basis for substrate binding and the catalytic mechanism of type III pantothenate kinase. , 2008, Biochemistry.

[78]  J. M. Bradshaw,et al.  Role of the N- and C-lobes of calmodulin in the activation of Ca(2+)/calmodulin-dependent protein kinase II. , 2008, Biochemistry.

[79]  K. Garcia,et al.  Structural organization of a full-length gp130/LIF-R cytokine receptor transmembrane complex. , 2008, Molecules and Cells.

[80]  Toshihide Kobayashi,et al.  Lysenin: a sphingomyelin specific pore-forming toxin. , 2008, Biochimica et biophysica acta.

[81]  W. Goldmann,et al.  Chapter Eight Cytoskeletal Proteins at the Lipid Membrane , 2008 .

[82]  R. Caprioli,et al.  Structure of the S100A6 complex with a fragment from the C-terminal domain of Siah-1 interacting protein: a novel mode for S100 protein target recognition. , 2008, Biochemistry.

[83]  Guanghua Zhao,et al.  Facilitated diffusion of iron(II) and dioxygen substrates into human H-chain ferritin. A fluorescence and absorbance study employing the ferroxidase center substitution Y34W. , 2008, Journal of the American Chemical Society.

[84]  S. Lata,et al.  Structural basis for autoinhibition of ESCRT-III CHMP3. , 2008, Journal of molecular biology.

[85]  Jianbin Huang,et al.  Bile salt-induced vesicle-to-micelle transition in catanionic surfactant systems: steric and electrostatic interactions. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[86]  J. D. Clark,et al.  Indole cytosolic phospholipase A2 alpha inhibitors: discovery and in vitro and in vivo characterization of 4-{3-[5-chloro-2-(2-{[(3,4-dichlorobenzyl)sulfonyl]amino}ethyl)-1-(diphenylmethyl)-1H-indol-3-yl]propyl}benzoic acid, efipladib. , 2008, Journal of medicinal chemistry.

[87]  M. Pellecchia,et al.  NMR studies of a heterotypic Sam-Sam domain association: the interaction between the lipid phosphatase Ship2 and the EphA2 receptor. , 2008, Biochemistry.

[88]  Mark E Byrne,et al.  Molecular imprinting within hydrogels II: progress and analysis of the field. , 2008, International journal of pharmaceutics.

[89]  Shaohua Zhang,et al.  Aggregation behavior of pluronic triblock copolymer in 1-butyl-3-methylimidazolium type ionic liquids. , 2008, The journal of physical chemistry. B.

[90]  M. Guo,et al.  Surface modification of polymeric vesicles via host-guest inclusion complexation. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[91]  Karl E Duderstadt,et al.  Alanine-scanning mutagenesis defines a conserved energetic hotspot in the CaValpha1 AID-CaVbeta interaction site that is critical for channel modulation. , 2008, Structure.

[92]  S. Bhattacharjya,et al.  Interactions of a designed peptide with lipopolysaccharide: Bound conformation and anti-endotoxic activity. , 2008, Biochemical and biophysical research communications.

[93]  S. Zakharov,et al.  Primary events in the colicin translocon: FRET analysis of colicin unfolding initiated by binding to BtuB and OmpF. , 2008, Biochemistry.

[94]  Jie Chen,et al.  Binding of calcium ions to Ras promotes Ras guanine nucleotide exchange under emulated physiological conditions. , 2008, Biochimica et biophysica acta.

[95]  G. S. Kumar,et al.  Self-structure induction in single stranded poly(A) by small molecules: Studies on DNA intercalators, partial intercalators and groove binding molecules. , 2008, Archives of biochemistry and biophysics.

[96]  S. Bottomley,et al.  Stabilization of Neurotoxic Soluble β-Sheet-Rich Conformations of the Alzheimer's Disease Amyloid-β Peptide , 2008 .

[97]  Lushan Wang,et al.  Structural changes of cellobiohydrolase I (1,4-β-D-glucan-cellobiohydrolase I, CBHI) and PNPC (p-nitrophenyl-β-D-cellobioside) during the binding process , 2008, Science in China Series C: Life Sciences.

[98]  N. Kishore,et al.  Calorimetric and spectroscopic studies on the interaction of methimazole with bovine serum albumin. , 2008, Journal of pharmaceutical sciences.

[99]  Markku S Kulomaa,et al.  Rational Modification of Ligand‐Binding Preference of Avidin by Circular Permutation and Mutagenesis , 2008, Chembiochem : a European journal of chemical biology.

[100]  A. Gué,et al.  Characterization of recognition sites for diethyl 4-nitrobenzylphosphonate, an organophosphate pesticide analogue. , 2008, Analytica chimica acta.

[101]  A. Heck,et al.  Determination of stoichiometry and conformational changes in the first step of the P22 tail assembly. , 2008, Journal of molecular biology.

[102]  Q. Huang,et al.  Binding and degradation of DNA on montmorillonite coated by hydroxyl aluminum species. , 2008, Colloids and surfaces. B, Biointerfaces.

[103]  A. Imberty,et al.  Structural basis of the preferential binding for globo-series glycosphingolipids displayed by Pseudomonas aeruginosa lectin I. , 2008, Journal of molecular biology.

[104]  Olivier Michielin,et al.  Protein-protein interaction investigated by steered molecular dynamics: the TCR-pMHC complex. , 2008, Biophysical journal.

[105]  R. Lührmann,et al.  An Unusual RNA Recognition Motif Acts as a Scaffold for Multiple Proteins in the Pre-mRNA Retention and Splicing Complex* , 2008, Journal of Biological Chemistry.

[106]  J. D. Clark,et al.  Thermodynamic characterization of cytosolic phospholipase A2 alpha inhibitors. , 2008, Analytical biochemistry.

[107]  Jean-Michel Rondeau,et al.  Protein Crystallography and Drug Discovery , 2008 .

[108]  H. Doe,et al.  Aggregation of S6 in a quasi-native state by sub-micellar SDS. , 2008, Biochimica et biophysica acta.

[109]  E. Herdtweck,et al.  Addressing association entropy by reconstructing guanidinium anchor groups for anion binding: design, synthesis, and host-guest binding studies in polar and protic solutions. , 2008, Chemistry.

[110]  M. E. Brown,et al.  Chapter 1 - Introduction to Recent Advances, Techniques and Applications of Thermal Analysis and Calorimetry , 2008 .

[111]  Moses Lee,et al.  2-Aminopurine/cytosine base pair containing oligonucleotides: fluorescence spectroscopy studies on DNA-polyamide binding. , 2008, Biochemical and biophysical research communications.

[112]  Kouhei Tsumoto,et al.  Critical contribution of VH–VL interaction to reshaping of an antibody: The case of humanization of anti‐lysozyme antibody, HyHEL‐10 , 2008, Protein science : a publication of the Protein Society.

[113]  S. Dunn,et al.  The stator complex of the A1A0-ATP synthase--structural characterization of the E and H subunits. , 2008, Journal of molecular biology.

[114]  T. Haertlé,et al.  Energetics of the interactions of human serum albumin with cationic surfactant. , 2008, Archives of biochemistry and biophysics.

[115]  H. Saito,et al.  Conformational flexibility of the N-terminal domain of apolipoprotein a-I bound to spherical lipid particles. , 2008, Biochemistry.

[116]  S. Diggle,et al.  Inhibition and dispersion of Pseudomonas aeruginosa biofilms by glycopeptide dendrimers targeting the fucose-specific lectin LecB. , 2008, Chemistry & biology.

[117]  Stephen Neidle,et al.  Cancer drug design and discovery , 2008 .

[118]  J. Sodroski,et al.  Small-molecule CD4 mimics interact with a highly conserved pocket on HIV-1 gp120. , 2008, Structure.

[119]  R. Armstrong,et al.  Characterization of the binding of 8-anilinonaphthalene sulfonate to rat class Mu GST M1-1. , 2008, Biophysical chemistry.

[120]  Jianyun Lu,et al.  The RXRalpha C-terminus T462 is a NMR sensor for coactivator peptide binding. , 2008, Biochemical and biophysical research communications.

[121]  M. J. Conroy,et al.  Colicin N Binds to the Periphery of Its Receptor and Translocator, Outer Membrane Protein F , 2008, Structure.

[122]  Elizabeth A Komives,et al.  Pre-folding IkappaBalpha alters control of NF-kappaB signaling. , 2008, Journal of molecular biology.

[123]  J. Ladbury Application of isothermal titration calorimetry in the biological sciences: things are heating up! , 2004, BioTechniques.

[124]  D. Jackola,et al.  Entropy-favored human antibody binding reactions with a non-infectious antigen. , 2008, Molecular immunology.

[125]  I. Boyaci,et al.  Selection of staphylococcal enterotoxin B (SEB)-binding peptide using phage display technology , 2008, Biochemical and Biophysical Research Communications.

[126]  M. Walkinshaw,et al.  Cloning, purification and characterization of the Caenorhabditis elegans small glutamine-rich tetratricopeptide repeat-containing protein. , 2008, Biochimica et biophysica acta.

[127]  M. Esteban,et al.  Thermodynamics of Cd2+ and Zn2+ binding by the phytochelatin (gamma-Glu-Cys)4-Gly and its precursor glutathione. , 2008, Analytical biochemistry.

[128]  Anirban Bhunia,et al.  Berberine targets assembly of Escherichia coli cell division protein FtsZ. , 2008, Biochemistry.

[129]  R. Suzuki,et al.  Structural and Thermodynamic Analyses of Solute-binding Protein from Bifidobacterium longum Specific for Core 1 Disaccharide and Lacto-N-biose I* , 2008, Journal of Biological Chemistry.

[130]  Piotras Cimmperman,et al.  A quantitative model of thermal stabilization and destabilization of proteins by ligands. , 2008, Biophysical journal.

[131]  A. Wysłouch-Cieszyńska,et al.  A diadenosine 5',5''-P1P4 tetraphosphate (Ap4A) hydrolase from Arabidopsis thaliana that is activated preferentially by Mn2+ ions. , 2008, Acta biochimica Polonica.

[132]  G. S. Kumar,et al.  Berberine-DNA complexation: new insights into the cooperative binding and energetic aspects. , 2008, Biochimica et biophysica acta.

[133]  S. Butcher,et al.  Thermodynamics and folding pathway of tetraloop receptor-mediated RNA helical packing. , 2008, Journal of molecular biology.

[134]  Agnieszka Bronowska,et al.  Residual ligand entropy in the binding of p-substituted benzenesulfonamide ligands to bovine carbonic anhydrase II. , 2008, Journal of the American Chemical Society.

[135]  Z. Kiraly,et al.  Thermodynamics of micelle formation of the ephedrine-based chiral cationic surfactant DMEB in water, and the intercalation of DMEB in montmorillonite , 2008 .

[136]  G. Visser,et al.  Glycosyltransferase-catalyzed synthesis of bioactive oligosaccharides. , 2008, Biotechnology advances.

[137]  E. Sudhölter,et al.  Complexation of phenols and thiophenol by phosphine oxides and phosphates. Extraction, isothermal titration calorimetry, and ab initio calculations. , 2008, The journal of physical chemistry. A.

[138]  Fillipe A.C. Garcia,et al.  Esterification of acetic acid with alcohols using supported niobium pentoxide on silica–alumina catalysts , 2008 .

[139]  Shahab M. Danesh,et al.  Recognition of the activated states of Galpha13 by the rgRGS domain of PDZRhoGEF. , 2008, Structure.

[140]  R. Pelton,et al.  Polyelectrolyte complex characterization with isothermal titration calorimetry and colloid titration , 2008 .

[141]  Yi Zhang,et al.  Pentamidine binds to tRNA through non-specific hydrophobic interactions and inhibits aminoacylation and translation , 2008, Nucleic acids research.

[142]  V. Brabec,et al.  Biophysical studies on the stability of DNA intrastrand cross-links of transplatin. , 2008, Biophysical journal.

[143]  A. Lees,et al.  Directed assembly metallocyclic supramolecular systems for molecular recognition and chemical sensing , 2008 .

[144]  Adam R. Urbach,et al.  Carbonic anhydrase as a model for biophysical and physical-organic studies of proteins and protein-ligand binding. , 2008, Chemical reviews.

[145]  M. Ballauff,et al.  Enzymatic activity of immobilized enzyme determined by isothermal titration calorimetry. , 2008, Analytical biochemistry.

[146]  D. Schmoll,et al.  Biophysical Characterization of the Interaction between Hepatic Glucokinase and Its Regulatory Protein , 2008, Journal of Biological Chemistry.

[147]  A. Saboury,et al.  A New Approach for Titration Calorimetric Data Analysis on the Binding of Magnesium Ion with Myelin Basic Protein , 2008 .

[148]  R. Guo,et al.  Interactions of Puerarin with Micelles: pKa Shifts and Thermodynamics , 2008 .

[149]  T. Reineke,et al.  Correlation of amine number and pDNA binding mechanism for trehalose-based polycations. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[150]  Caleb B. McDonald,et al.  Evidence that the bZIP domains of the Jun transcription factor bind to DNA as monomers prior to folding and homodimerization. , 2008, Archives of biochemistry and biophysics.

[151]  O. Abián,et al.  Defining the epitope region of a peptide from the Streptomyces coelicolor phosphoenolpyruvate:sugar phosphotransferase system able to bind to the enzyme I. , 2008, Biophysical journal.

[152]  K. R. Daghastanli,et al.  Effect of cholesterol on the interaction of the amphibian antimicrobial peptide DD K with liposomes , 2008, Peptides.

[153]  G. S. Kumar,et al.  Energetics of the binding of phototoxic and cytotoxic plant alkaloid sanguinarine to DNA: Isothermal titration calorimetric studies , 2008 .

[154]  C. Airoldi,et al.  RETRACTED: Performance of modified montmorillonite clay in mercury adsorption process and thermodynamic studies , 2008 .

[155]  T. Härd,et al.  Interaction of Alzheimer's A beta peptide with an engineered binding protein--thermodynamics and kinetics of coupled folding-binding. , 2008, Journal of molecular biology.

[156]  A. Liu,et al.  Advances in Planar Lipid Bilayers and Liposomes , 2011 .

[157]  M. Ngu-Schwemlein,et al.  Thermodynamics and fluorescence studies of the interactions of cyclooctapeptides with Hg2+, Pb2+, and Cd2+. , 2008, Bioorganic & medicinal chemistry.

[158]  Sv Silvia Nedea,et al.  Advances in Planar Lipid Bilayers and Liposomes , 2012 .

[159]  Lin Li,et al.  Interactions between Ionic Surfactants and Polysaccharides in Aqueous Solutions , 2008 .

[160]  Keiji Tanaka,et al.  Structural basis for Ufm1 processing by UfSP1 , 2008 .

[161]  M. L. Bianconi,et al.  Calorimetry of enzyme-catalyzed reactions. , 2007, Biophysical chemistry.

[162]  J. Ribeiro,et al.  A novel clade of cysteinyl leukotriene scavengers in soft ticks. , 2008, Insect biochemistry and molecular biology.

[163]  A. Cooper,et al.  Heat capacity effects in protein folding and ligand binding: a re-evaluation of the role of water in biomolecular thermodynamics. , 2005, Biophysical chemistry.

[164]  A. Saboury,et al.  A Comparative Study of the Direct Calorimetric Determination of the Denaturation Enthalpy for Lysozyme in Sodium Dodecyl Sulfate and Dodecyltrimethylammonium Bromide Solutions , 2008 .

[165]  J. Ausió,et al.  Leishmania donovani Peroxin 14 Undergoes a Marked Conformational Change following Association with Peroxin 5* , 2008, Journal of Biological Chemistry.

[166]  Zhi Yuan,et al.  Preparation and Recognition Study on the Peptides in Aqueous Media of Poly(pyridine derivative‐co‐acrylamide) , 2008 .

[167]  J. Featherstone,et al.  Effects of Fluoride on the Interactions between Amelogenin and Apatite Crystals , 2008, Journal of dental research.

[168]  C. Rao,et al.  Growth kinetics of gold nanocrystals: a combined small-angle X-ray scattering and calorimetric study. , 2008, Small.

[169]  C. Robinson,et al.  Allosteric Activation of the ATPase Activity of the Escherichia coli RhlB RNA Helicase , 2007, Journal of Biological Chemistry.

[170]  J. Taubitz,et al.  On the Importance of the Nature of Hydrogen Bond Donors in Multiple Hydrogen Bond Systems , 2008 .

[171]  S. Valiyaveettil,et al.  Structure, self-assembly, and dual role of a beta-defensin-like peptide from the Chinese soft-shelled turtle eggshell matrix. , 2008, Journal of the American Chemical Society.

[172]  E. Oldfield,et al.  Structures of a potent phenylalkyl bisphosphonate inhibitor bound to farnesyl and geranylgeranyl diphosphate synthases , 2008, Proteins.

[173]  I. Jelesarov,et al.  A survey of the year 2006 literature on applications of isothermal titration calorimetry , 2008, Journal of molecular recognition : JMR.

[174]  S. Bottomley,et al.  Stabilization of neurotoxic soluble beta-sheet-rich conformations of the Alzheimer's disease amyloid-beta peptide. , 2008, Biophysical journal.

[175]  M. Record,et al.  Formation of a wrapped DNA-protein interface: experimental characterization and analysis of the large contributions of ions and water to the thermodynamics of binding IHF to H' DNA. , 2008, Journal of molecular biology.

[176]  G. S. Kumar,et al.  DNA intercalation by quinacrine and methylene blue: a comparative binding and thermodynamic characterization study. , 2008, DNA and cell biology.

[177]  M. Engelhard,et al.  Green tea extracts interfere with the stress‐protective activity of PrPC and the formation of PrPSc , 2008, Journal of neurochemistry.

[178]  J. Schuchhardt,et al.  Systematic interpretation of cyclic nucleotide binding studies using KinetXBase , 2008, Proteomics.

[179]  B. Brandsdal,et al.  Antimicrobial peptides with stability toward tryptic degradation. , 2008, Biochemistry.

[180]  J. Seelig,et al.  Binding and clustering of glycosaminoglycans: a common property of mono- and multivalent cell-penetrating compounds. , 2008, Biophysical journal.

[181]  I. Luque,et al.  Structure-based prediction of binding affinities and molecular design of peptide ligands. , 1998, Methods in enzymology.

[182]  G. S. Kumar,et al.  Thermodynamics of the binding of cytotoxic protoberberine molecule coralyne to deoxyribonucleic acids. , 2008, Biochimica et biophysica acta.

[183]  T. Lindberg Strategies and Tactics in Organic Synthesis , 1993 .

[184]  K. Brandenburg,et al.  Thermodynamic Analysis of the Interaction of Lipopolysaccharides with Cationic Compounds , 2008 .

[185]  D. Logan,et al.  Structure and functional properties of the Bacillus subtilis transcriptional repressor Rex , 2008, Molecular microbiology.

[186]  D. Wilcox Isothermal titration calorimetry of metal ions binding to proteins: An overview of recent studies , 2008 .

[187]  A. Makarov,et al.  Role of the individual domains of translation termination factor eRF1 in GTP binding to eRF3 , 2007, Proteins.

[188]  Shih-Hsiung Wu,et al.  Thermodynamic characterization of specific interactions between the human Lon protease and G-quartet DNA , 2007, Nucleic acids research.

[189]  K. Sharp,et al.  Entropy—enthalpy compensation: Fact or artifact? , 2001, Protein science : a publication of the Protein Society.

[190]  M. Buck,et al.  Compensatory and long-range changes in picosecond-nanosecond main-chain dynamics upon complex formation: 15N relaxation analysis of the free and bound states of the ubiquitin-like domain of human plexin-B1 and the small GTPase Rac1. , 2008, Journal of molecular biology.

[191]  H. C. van der Mei,et al.  Staphylococcus aureus-Fibronectin Interactions with and without Fibronectin-Binding Proteins and Their Role in Adhesion and Desorption , 2008, Applied and Environmental Microbiology.

[192]  Daniel Harries,et al.  A practical guide on how osmolytes modulate macromolecular properties. , 2008, Methods in cell biology.

[193]  D. Engelman,et al.  Energetics of peptide (pHLIP) binding to and folding across a lipid bilayer membrane , 2008, Proceedings of the National Academy of Sciences.

[194]  A. Ansari,et al.  Expanding the specificity of DNA targeting by harnessing cooperative assembly. , 2008, Biochimie.

[195]  J. Min,et al.  A SPOT on the chromatin landscape? Histone peptide arrays as a tool for epigenetic research. , 2008, Trends in biochemical sciences.

[196]  Laren M. Tolbert,et al.  Sugar-Substituted Poly(p-phenyleneethynylene)s: Sensitivity Enhancement toward Lectins and Bacteria , 2008 .

[197]  S. Furmaniak,et al.  Water adsorption on carbons--critical review of the most popular analytical approaches. , 2008, Advances in colloid and interface science.

[198]  B. Farruggia,et al.  Complex formation between protein and poly vinyl sulfonate as a strategy of proteins isolation. , 2008, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

[199]  M. Ikekita,et al.  Binding parameters and thermodynamics of the interaction of imino sugars with a recombinant human acid alpha-glucosidase (alglucosidase alfa): insight into the complex formation mechanism. , 2008, Clinica chimica acta; international journal of clinical chemistry.

[200]  A. Boraston,et al.  Divergent Modes of Glycan Recognition by a New Family of Carbohydrate-binding Modules*♦ , 2008, Journal of Biological Chemistry.

[201]  T. Weil,et al.  Dendritic star polymers for efficient DNA binding and stimulus-dependent DNA release. , 2008, Biomacromolecules.

[202]  E. Lewis,et al.  Isothermal titration calorimetry: experimental design, data analysis, and probing macromolecule/ligand binding and kinetic interactions. , 2008, Methods in cell biology.

[203]  J. Massagué TGF-beta signal transduction. , 1998, Annual review of biochemistry.

[204]  A. Saboury,et al.  A Thermodynamic Study on the Binding of Human Serum Albumin with New Synthesized Anti Cancer Pd (II) Complex , 2008 .

[205]  J. Sancho,et al.  Molten globule and native state ensemble of Helicobacter pylori flavodoxin: can crowding, osmolytes or cofactors stabilize the native conformation relative to the molten globule? , 2008, Biophysical journal.

[206]  Samy O Meroueh,et al.  PDBcal: A Comprehensive Dataset for Receptor–Ligand Interactions with Three‐dimensional Structures and Binding Thermodynamics from Isothermal Titration Calorimetry , 2008, Chemical biology & drug design.

[207]  Modulation by substrates of the interaction between the HasR outer membrane receptor and its specific TonB-like protein, HasB. , 2008, Journal of molecular biology.

[208]  V. Conticello,et al.  Design of a selective metal ion switch for self-assembly of peptide-based fibrils. , 2008, Journal of the American Chemical Society.

[209]  W. Wilson,et al.  Sequence specific and high affinity recognition of 5'-ACGCGT-3' by rationally designed pyrrole-imidazole H-pin polyamides: thermodynamic and structural studies. , 2008, Bioorganic & medicinal chemistry.

[210]  Shohei Koide,et al.  A Dominant Conformational Role for Amino Acid Diversity in Minimalist Protein-protein Interfaces Nih Public Access Introduction , 2022 .

[211]  S. Joshi,et al.  The interaction of heparin/polyanions with bovine, porcine, and human growth hormone. , 2008, Journal of pharmaceutical sciences.

[212]  G. Whitesides,et al.  Using ion channel-forming peptides to quantify protein-ligand interactions. , 2008, Journal of the American Chemical Society.

[213]  F. Klärner,et al.  Chapter 4 Synthesis of molecular tweezers and clips by the use of a molecular lego set and their supramolecular functions , 2008 .

[214]  Christopher J. Oldfield,et al.  Calorimetry and Thermodynamics in Drug Design , 2008 .

[215]  David Baker,et al.  Experimental and computational analyses of the energetic basis for dual recognition of immunity proteins by colicin endonucleases. , 2008, Journal of molecular biology.

[216]  J. Hoxie,et al.  Relationship of HIV-1 and SIV envelope glycoprotein trimer occupation and neutralization. , 2008, Virology.

[217]  F. Dyda,et al.  Mechanism of IS200/IS605 Family DNA Transposases: Activation and Transposon-Directed Target Site Selection , 2008, Cell.

[218]  T. Haertlé,et al.  Beta-lactoglobulin structure and retinol binding changes in presence of anionic and neutral detergents. , 2008, Journal of agricultural and food chemistry.

[219]  R. Pelton,et al.  Characterizing charge and crosslinker distributions in polyelectrolyte microgels , 2008 .

[220]  A. Doig Stability and design of alpha-helical peptides. , 2008, Progress in molecular biology and translational science.

[221]  C. Yu,et al.  Assembly of chloroplast signal recognition particle involves structural rearrangement in cpSRP43. , 2008, Journal of molecular biology.

[222]  A. Mitrevej,et al.  Characterization of drug-chitosan interaction by 1H NMR, FTIR and isothermal titration calorimetry. , 2008, European journal of pharmaceutics and biopharmaceutics : official journal of Arbeitsgemeinschaft fur Pharmazeutische Verfahrenstechnik e.V.

[223]  Jian-Min Zhou,et al.  Structure–activity relationships of wheat flavone O‐methyltransferase – a homodimer of convenience , 2008, The FEBS journal.

[224]  Joanna M. Kasprzak,et al.  Crystal structure of the Escherichia coli 23S rRNA:m5C methyltransferase RlmI (YccW) reveals evolutionary links between RNA modification enzymes. , 2008, Journal of molecular biology.

[225]  J. Nix,et al.  Structural basis of the transcriptional regulation of the proline utilization regulon by multifunctional PutA. , 2008, Journal of molecular biology.

[226]  R. Norton,et al.  The SOCS box domain of SOCS3: structure and interaction with the elonginBC-cullin5 ubiquitin ligase. , 2008, Journal of molecular biology.

[227]  R. Guo,et al.  Formation and microstructure transition of F127/TX-100 complex. , 2008, The journal of physical chemistry. B.

[228]  T. Wolf,et al.  Synthesis and physico-chemical properties of phase-pure ceramic LuBa2Cu3O7−δ , 2008 .

[229]  Zhengguo Zhou,et al.  Mixed macromolecular crowding inhibits amyloid formation of hen egg white lysozyme. , 2008, Biochimica et biophysica acta.

[230]  D. Engelman,et al.  A monomeric membrane peptide that lives in three worlds: in solution, attached to, and inserted across lipid bilayers. , 2007, Biophysical journal.

[231]  S. Gellman,et al.  Dual mechanism of bacterial lethality for a cationic sequence-random copolymer that mimics host-defense antimicrobial peptides. , 2008, Journal of molecular biology.

[232]  S. Eom,et al.  Crystal structure of the GluR0 ligand-binding core from Nostoc punctiforme in complex with L-glutamate: structural dissection of the ligand interaction and subunit interface. , 2008, Journal of molecular biology.

[233]  B. Tidor,et al.  Computational design and experimental study of tighter binding peptides to an inactivated mutant of HIV‐1 protease , 2008, Proteins.

[234]  Yi Lin,et al.  Characterization of the Mechanism of the Staphylococcus aureus Cell Envelope by Bacitracin and Bacitracin-Metal Ions , 2008, Journal of Membrane Biology.

[235]  Thomas M. Smith,et al.  Identification of peptide antagonists to glycoprotein Ibalpha that selectively inhibit von Willebrand factor dependent platelet aggregation. , 2008, Biochemistry.

[236]  Michael R. Green,et al.  Solution Conformation and Thermodynamic Characteristics of RNA Binding by the Splicing Factor U2AF65* , 2008, Journal of Biological Chemistry.

[237]  A. Niemiec,et al.  Interaction of ethylene oxide-propylene oxide copolymers with ionic surfactants studied by calorimetry: random versus block copolymers. , 2008, The journal of physical chemistry. B.

[238]  F. van Petegem,et al.  Structures of CaV2 Ca2+/CaM-IQ domain complexes reveal binding modes that underlie calcium-dependent inactivation and facilitation. , 2008, Structure.

[239]  J. Kennedy,et al.  Analytical Methods in Supramolecular Chemistry, C.A. Schalley (Ed.). Wiley-VCH, Weinheim, Germany (2007), , 484 pp., Price: £149.00, ISBN: 3-527-31505-5 , 2008 .

[240]  Karthik Ramani,et al.  Folding considerations for therapeutic protein formulations. , 2008, Progress in molecular biology and translational science.

[241]  Elina Tjioe,et al.  Detection of specific solvent rearrangement regions of an enzyme: NMR and ITC studies with aminoglycoside phosphotransferase(3')-IIIa. , 2008, Biochemistry.

[242]  S. Valiyaveettil,et al.  Structural characterization of myotoxic ecarpholin S from Echis carinatus venom. , 2008, Biophysical journal.

[243]  H. Bosshard,et al.  Isothermal titration calorimetry and differential scanning calorimetry as complementary tools to investigate the energetics of biomolecular recognition , 1999, Journal of molecular recognition : JMR.

[244]  M. Nonato,et al.  Structural stability and reversible unfolding of recombinant porcine S100A12. , 2008, Biophysical chemistry.

[245]  P. Das,et al.  Effect of the head-group geometry of amino acid-based cationic surfactants on interaction with plasmid DNA. , 2008, Biomacromolecules.

[246]  M. Bello,et al.  Energetics of protein homodimerization: Effects of water sequestering on the formation of β‐lactoglobulin dimer , 2007, Proteins.

[247]  G. Clore,et al.  Impact of Phosphorylation on Structure and Thermodynamics of the Interaction between the N-terminal Domain of Enzyme I and the Histidine Phosphocarrier Protein of the Bacterial Phosphotransferase System* , 2008, Journal of Biological Chemistry.

[248]  P. Zalupski,et al.  Two‐Phase Calorimetry. I. Studies on the Thermodynamics of Lanthanide Extraction by Bis(2‐EthylHexyl) Phosphoric Acid , 2008 .

[249]  H. F. Fisher,et al.  Theoretical aspects of isothermal titration calorimetry. , 1998, Methods in enzymology.

[250]  Lin Li,et al.  Influence of cetyltrimethylammonium bromide on physicochemical properties and microstructures of chitosan-TPP nanoparticles in aqueous solutions. , 2008, Journal of colloid and interface science.

[251]  Rino Rappuoli,et al.  Structure-based antigen design: a strategy for next generation vaccines , 2008, Trends in Biotechnology.

[252]  K. Sharp,et al.  Heat capacity in proteins. , 2005, Annual review of physical chemistry.

[253]  A. Wittinghofer,et al.  Crystal structures of the conserved tRNA-modifying enzyme GidA: implications for its interaction with MnmE and substrate. , 2008, Journal of molecular biology.

[254]  M. Bonini,et al.  Thermodynamic and kinetic characterization of host-guest association between bolaform surfactants and alpha- and beta-cyclodextrins. , 2008, The journal of physical chemistry. B.

[255]  M. Esteban,et al.  Competitive binding of Cd and Zn with the phytochelatin (gamma-Glu-Cys)4-Gly: comparative study by mass spectrometry, voltammetry-multivariate curve resolution, and isothermal titration calorimetry. , 2008, Environmental science & technology.

[256]  H. Riezman,et al.  Natamycin Blocks Fungal Growth by Binding Specifically to Ergosterol without Permeabilizing the Membrane* , 2008, Journal of Biological Chemistry.

[257]  K. Beyreuther,et al.  Structure of the intracellular domain of the amyloid precursor protein in complex with Fe65‐PTB2 , 2008, EMBO reports.

[258]  D. Sherratt,et al.  Molecular mechanism of sequence-directed DNA loading and translocation by FtsK. , 2008, Molecular cell.

[259]  L. Rao,et al.  Thermodynamic study of the complexation of uranium(VI) with nitrate at variable temperatures , 2008 .

[260]  Timothy D. Fenn,et al.  Rab and Arl GTPase Family Members Cooperate in the Localization of the Golgin GCC185 , 2008, Cell.

[261]  K. Garcia,et al.  Different thermodynamic binding mechanisms and peptide fine specificities associated with a panel of structurally similar high-affinity T cell receptors. , 2008, Biochemistry.

[262]  Yves Mély,et al.  How the HIV-1 nucleocapsid protein binds and destabilises the (-)primer binding site during reverse transcription. , 2008, Journal of molecular biology.

[263]  Surendra S. Negi,et al.  Thermodynamic fidelity of the mammalian cytochrome P450 2B4 active site in binding substrates and inhibitors. , 2008, Journal of molecular biology.

[264]  T. Stemmler,et al.  Drosophila frataxin: an iron chaperone during cellular Fe-S cluster bioassembly. , 2008, Biochemistry.

[265]  Adam R. Urbach,et al.  Scope of amino acid recognition by cucurbit[8]uril , 2008 .

[266]  J. Seelig,et al.  Melittin interaction with sulfated cell surface sugars. , 2008, Biochemistry.

[267]  E. Pozharski,et al.  Crystal structure of human thymine DNA glycosylase bound to DNA elucidates sequence-specific mismatch recognition , 2008, Proceedings of the National Academy of Sciences.

[268]  U. Sleytr,et al.  The structure and binding behavior of the bacterial cell surface layer protein SbsC. , 2008, Structure.

[269]  P. Westh,et al.  Experimental determination of the third derivative of G. I. enthalpic interaction. , 2008, The Journal of chemical physics.

[270]  C S Raman,et al.  Isothermal titration calorimetry of protein-protein interactions. , 1999, Methods.

[271]  Critical Residues for Cofactor Binding and Catalytic Activity in the Aminoglycoside Resistance Methyltransferase Sgm , 2008, Journal of bacteriology.

[272]  M. Detty,et al.  Substituent control of DNA binding modes in a series of chalcogenoxanthylium photosensitizers as determined by isothermal titration calorimetry and topoisomerase I DNA unwinding assay. , 2008, Bioorganic & medicinal chemistry.

[273]  D. G. Udugamasooriya,et al.  Conformational constraint in protein ligand design and the inconsistency of binding entropy. , 2008, Biopolymers.

[274]  V. Aggarwal,et al.  Strategies and Tactics in Organic Synthesis , 2012 .

[275]  J. Wikswo,et al.  A microfabricated nanocalorimeter: design, characterization, and chemical calibration. , 2008, Analytical chemistry.

[276]  H. Dyson,et al.  Hydrogen–deuterium exchange strategy for delineation of contact sites in protein complexes , 2008, FEBS letters.

[277]  F. Sicheri,et al.  Structure of the Dual Enzyme Ire1 Reveals the Basis for Catalysis and Regulation in Nonconventional RNA Splicing , 2008, Cell.

[278]  Christopher B. Stanley,et al.  Protein structure and hydration probed by SANS and osmotic stress. , 2008, Biophysical journal.

[279]  A. Vargas-Berenguel,et al.  Ferrocene-mannose conjugates as electrochemical molecular sensors for concanavalin A lectin. , 2008, Organic & biomolecular chemistry.

[280]  Jianlin Cheng A multi-template combination algorithm for protein comparative modeling , 2008, BMC Structural Biology.

[281]  Daniel E. Zak,et al.  Memory T cell RNA rearrangement programmed by heterogeneous nuclear ribonucleoprotein hnRNPLL. , 2008, Immunity.

[282]  Adam R. Urbach,et al.  Effects of the number and placement of positive charges on viologen–cucurbit[n]uril interactions , 2008 .

[283]  S. Miron,et al.  Molecular interactions between Wells-Dawson type polyoxometalates and human serum albumin. , 2008, Biomacromolecules.

[284]  H. Vogel,et al.  Solution Structure of the Calponin Homology (CH) Domain from the Smoothelin-like 1 Protein , 2008, Journal of Biological Chemistry.

[285]  K. P. Murphy,et al.  Prediction of binding energetics from structure using empirical parameterization. , 1998, Methods in enzymology.

[286]  G. Jameson,et al.  Structure and stability of whey proteins , 2020, Milk Proteins.

[287]  A. Zhu,et al.  Interactions between O-carboxymethylchitosan and bovine serum albumin , 2008 .

[288]  B. Glass Chapter 18 – Medical Applications of Thermal Methods , 2008 .

[289]  C. Tian,et al.  Structural basis of beta-catenin recognition by Tax-interacting protein-1. , 2008, Journal of molecular biology.

[290]  A. Tan,et al.  Divalent ion binding properties of the timothy grass allergen, Phl p 7. , 2008, Biochemistry.

[291]  A. Nonat,et al.  Influence of orthophosphate ions on the dissolution of tricalcium silicate , 2008 .

[292]  Aurora Martínez,et al.  Rescuing proteins of low kinetic stability by chaperones and natural ligands phenylketonuria, a case study. , 2008, Progress in molecular biology and translational science.

[293]  A. Melnick,et al.  Structure of a BCOR corepressor peptide in complex with the BCL6 BTB domain dimer. , 2008, Molecular cell.

[294]  K. Kontturi,et al.  Controlled complexation of plasmid DNA with cationic polymers: effect of surfactant on the complexation and stability of the complexes. , 2008, Colloids and surfaces. B, Biointerfaces.

[295]  J. Tanner,et al.  Energetics of OCP1-OCP2 complex formation. , 2008, Biophysical chemistry.

[296]  Jun Li,et al.  Structural basis for inactivation of the human pyruvate dehydrogenase complex by phosphorylation: role of disordered phosphorylation loops. , 2008, Structure.

[297]  G. S. Kumar,et al.  DNA-binding cytotoxic alkaloids: comparative study of the energetics of binding of berberine, palmatine, and coralyne. , 2008, DNA and cell biology.

[298]  D. Speicher,et al.  Structural and functional effects of hereditary hemolytic anemia-associated point mutations in the alpha spectrin tetramer site. , 2008, Blood.

[299]  D. Wuttke,et al.  High concentration formulations of recombinant human interleukin-1 receptor antagonist: I. Physical characterization. , 2008, Journal of pharmaceutical sciences.

[300]  B. Mayer,et al.  Thermodynamic analysis of L-arginine and N omega-hydroxy-L-arginine binding to nitric oxide synthase. , 2008, Biochimica et biophysica acta.

[301]  K. Utsuno Thermodynamics of DNA condensation caused by mn2+ binding. , 2008, Chemical & pharmaceutical bulletin.

[302]  A. Jeromin,et al.  Regulatory and structural EF-hand motifs of neuronal calcium sensor-1: Mg 2+ modulates Ca 2+ binding, Ca 2+ -induced conformational changes, and equilibrium unfolding transitions. , 2008, Journal of molecular biology.

[303]  Caleb B. McDonald,et al.  Coupling of folding and DNA-binding in the bZIP domains of Jun-Fos heterodimeric transcription factor. , 2008, Archives of biochemistry and biophysics.

[304]  Denice C. Bay,et al.  Small multidrug resistance proteins: a multidrug transporter family that continues to grow. , 2008, Biochimica et biophysica acta.

[305]  Chang-an Yu,et al.  Domain movement of iron sulfur protein in cytochrome bc 1 complex is facilitated by the electron transfer from cytochrome b L to b H , 2008, FEBS letters.

[306]  J. Omichinski,et al.  p53 and TFIIEα share a common binding site on the Tfb1/p62 subunit of TFIIH , 2008, Proceedings of the National Academy of Sciences.

[307]  A. Saboury,et al.  Determination of partial unfolding enthalpy for lysozyme upon interaction with dodecyltrimethylammonium bromide using an extended solvation model , 2008, Journal of molecular recognition : JMR.

[308]  K. M. Armstrong,et al.  Thermodynamics of T‐cell receptor–peptide/MHC interactions: progress and opportunities , 2008, Journal of molecular recognition : JMR.

[309]  J. Simon,et al.  Determining thermodynamic parameters from isothermal calorimetric isotherms of the binding of macromolecules to metal cations originally chelated by a weak ligand. , 2008, The journal of physical chemistry. B.

[310]  J. Spurlino,et al.  Structural determination of estrogen-related receptor γ in the presence of phenol derivative compounds , 2008, The Journal of Steroid Biochemistry and Molecular Biology.

[311]  A. Higuchi,et al.  Microcalorimetrics studies of the thermodynamics and binding mechanism between L-tyrosinamide and aptamer. , 2008, The journal of physical chemistry. B.

[312]  E. Conti,et al.  Expression, reconstitution, and structure of an archaeal RNA degrading exosome. , 2008, Methods in enzymology.

[313]  H. Vogel,et al.  Thermodynamics of the interactions of tryptophan-rich cathelicidin antimicrobial peptides with model and natural membranes. , 2008, Biochimica et biophysica acta.

[314]  P. Misiak,et al.  Calorimetric and molecular modeling studies of N-alkoxycarbonylmethyl-N-alkyl-piperidinium chlorides , 2008 .

[315]  Y. Lo,et al.  High-affinity interaction between IKKbeta and NEMO. , 2008, Biochemistry.

[316]  A. Cooper Microcalorimetry of protein-protein interactions. , 1998, Methods in molecular biology.

[317]  M. Prieto,et al.  Energetics and partition of two cecropin-melittin hybrid peptides to model membranes of different composition. , 2008, Biophysical journal.

[318]  A. Hofmann,et al.  The Crystal Structure of Calcium-bound Annexin Gh1 from Gossypium hirsutum and Its Implications for Membrane Binding Mechanisms of Plant Annexins* , 2008, Journal of Biological Chemistry.

[319]  J. Fontecilla-Camps,et al.  DHR51, the Drosophila melanogaster homologue of the human photoreceptor cell-specific nuclear receptor, is a thiolate heme-binding protein. , 2008, Biochemistry.

[320]  P. Trost,et al.  Spontaneous Assembly of Photosynthetic Supramolecular Complexes as Mediated by the Intrinsically Unstructured Protein CP12* , 2008, Journal of Biological Chemistry.

[321]  A. Casadevall,et al.  Isothermal Titration Calorimetry Reveals Differential Binding Thermodynamics of Variable Region-identical Antibodies Differing in Constant Region for a Univalent Ligand* , 2008, Journal of Biological Chemistry.

[322]  Surendra Singh,et al.  A light scattering study of the interaction of fibroblast growth factor (FGF) with its receptor. , 2008, Biophysical journal.

[323]  G. S. Kumar,et al.  RNA targeting by small molecule alkaloids: Studies on the binding of berberine and palmatine to polyribonucleotides and comparison to ethidium , 2008 .

[324]  S. Sprang,et al.  Ric-8A Catalyzes Guanine Nucleotide Exchange on Gαi1 Bound to the GPR/GoLoco Exchange Inhibitor AGS3* , 2008, Journal of Biological Chemistry.

[325]  C. N. R. Rao,et al.  Growth Kinetics of Nanocrystals and Nanorods by Employing Small-angle X-ray Scattering (SAXS) and Other Techniques , 2009 .

[326]  V. Král,et al.  Stabilization of antibody structure upon association to a human carbonic anhydrase IX epitope studied by X‐ray crystallography, microcalorimetry, and molecular dynamics simulations , 2007, Proteins.

[327]  S. Miron,et al.  The carboxy-terminal domain of xeroderma pigmentosum complementation group C protein, involved in TFIIH and centrin binding, is highly disordered. , 2008, Biochemistry.

[328]  G. Guy,et al.  Structural basis for a novel intrapeptidyl H‐bond and reverse binding of c‐Cbl‐TKB domain substrates , 2008, The EMBO journal.

[329]  J. Williamson,et al.  Monitoring assembly of ribonucleoprotein complexes by isothermal titration calorimetry. , 2008, Methods in molecular biology.

[330]  G. Rudenko,et al.  Regulation of neurexin 1beta tertiary structure and ligand binding through alternative splicing. , 2008, Structure.

[331]  Jeffrey W. Smith,et al.  Competitive Interactions of Collagen and a Jararhagin-derived Disintegrin Peptide with the Integrin α2-I Domain* , 2008, Journal of Biological Chemistry.

[332]  W. Wilson,et al.  Antiparasitic compounds that target DNA. , 2008, Biochimie.

[333]  Elena Matei,et al.  Solution and crystal structures of a sugar binding site mutant of cyanovirin-N: no evidence of domain swapping. , 2008, Structure.

[334]  J. D. Clark,et al.  Benzenesulfonamide indole inhibitors of cytosolic phospholipase A2alpha: optimization of in vitro potency and rat pharmacokinetics for oral efficacy. , 2008, Bioorganic & medicinal chemistry.

[335]  Y. D. Livney,et al.  Saccharide‐structure effects on poly N‐isopropylacrylamide phase transition in aqueous media; Reflections on protein stability , 2008 .

[336]  Y. Hayashizaki,et al.  Structure of the C-terminal Phosphotyrosine Interaction Domain of Fe65L1 Complexed with the Cytoplasmic Tail of Amyloid Precursor Protein Reveals a Novel Peptide Binding Mode* , 2008, Journal of Biological Chemistry.

[337]  H. Ceri,et al.  Copper and Quaternary Ammonium Cations Exert Synergistic Bactericidal and Antibiofilm Activity against Pseudomonas aeruginosa , 2008, Antimicrobial Agents and Chemotherapy.

[338]  J. Kong,et al.  The role of loops 3 and 4 in the interdomains and intersubunits communication of E. coli cAMP receptor protein. , 2008, International journal of biological macromolecules.

[339]  T. Boggon,et al.  Domain Mapping of the Polycystin-2 C-terminal Tail Using de Novo Molecular Modeling and Biophysical Analysis* , 2008, Journal of Biological Chemistry.

[340]  A. Goldman,et al.  The Yersinia adhesin YadA binds to a collagenous triple-helical conformation but without sequence specificity. , 2008, Protein engineering, design & selection : PEDS.

[341]  Yong Chen,et al.  Effect of beta-cyclodextrin charge type on the molecular recognition thermodynamics of reactions with (ferrocenylmethyl)dimethylaminium derivatives. , 2008, The journal of physical chemistry. B.

[342]  W. Waghorne,et al.  A high-performance theory for thermodynamic study of solvation in mixed solvents , 2008 .

[343]  P. Wingfield,et al.  Structural biophysics of the NusB:NusE antitermination complex. , 2008, Journal of molecular biology.

[344]  Meiwen Cao,et al.  Aggregation properties of cationic gemini surfactants with dihydroxyethylamino headgroups in aqueous solution , 2008 .

[345]  Ulrich Rester,et al.  From virtuality to reality - Virtual screening in lead discovery and lead optimization: a medicinal chemistry perspective. , 2008, Current opinion in drug discovery & development.

[346]  D. Hilvert,et al.  Kinetics and thermodynamics of ligand binding to a molten globular enzyme and its native counterpart. , 2008, Journal of molecular biology.

[347]  R. Linhardt,et al.  Physiological, Pathophysiological and Therapeutic Roles of Heparin and Heparan Sulfate , 2008 .

[348]  X. An,et al.  From structure to function: insights into the catalytic substrate specificity and thermostability displayed by Bacillus subtilis mannanase BCman. , 2008, Journal of molecular biology.

[349]  Can Kayatekin,et al.  Zinc binding modulates the entire folding free energy surface of human Cu,Zn superoxide dismutase. , 2008, Journal of molecular biology.

[350]  G. Feller,et al.  Psychrophilic enzymes: revisiting the thermodynamic parameters of activation may explain local flexibility. , 2000, Biochimica et biophysica acta.

[351]  G. Folkers,et al.  Thermodynamics of Protein–Ligand Interactions: History, Presence, and Future Aspects , 2004, Journal of receptor and signal transduction research.

[352]  J. Tellinghuisen Isothermal titration calorimetry at very low c. , 2008, Analytical biochemistry.

[353]  Hiroaki Suzuki,et al.  Calcium Ions Are Involved in the Unusual Red Shift of the Light-harvesting 1 Qy Transition of the Core Complex in Thermophilic Purple Sulfur Bacterium Thermochromatium tepidum* , 2008, Journal of Biological Chemistry.

[354]  V. Drachev,et al.  Surfactant-induced amorphous aggregation of tobacco mosaic virus coat protein: a physical methods approach. , 2008, Macromolecular bioscience.

[355]  J. Cowan,et al.  Mapping iron binding sites on human frataxin: implications for cluster assembly on the ISU Fe–S cluster scaffold protein , 2008, JBIC Journal of Biological Inorganic Chemistry.

[356]  I. Tanaka,et al.  Structural Basis for Multimeric Heme Complexation through a Specific Protein-Heme Interaction , 2008, Journal of Biological Chemistry.

[357]  W. Chiu,et al.  Location and flexibility of the unique C-terminal tail of Aquifex aeolicus co-chaperonin protein 10 as derived by cryo-electron microscopy and biophysical techniques. , 2008, Journal of molecular biology.

[358]  J. Gordon,et al.  A new protocol for high-yield purification of recombinant human CXCL8((3-72))K11R/G31P expressed in Escherichia coli. , 2008, Protein expression and purification.

[359]  S. Bottomley,et al.  Generation and expression of a minimal hybrid Ig-receptor formed between single domains from proteins L and G. , 2008, Protein expression and purification.

[360]  The RXRα C-terminus T462 is a NMR sensor for coactivator peptide binding , 2008 .

[361]  F. Goñi,et al.  Phase diagrams of lipid mixtures relevant to the study of membrane rafts. , 2008, Biochimica et biophysica acta.

[362]  J. Ribeiro,et al.  Function, mechanism and evolution of the moubatin-clade of soft tick lipocalins. , 2008, Insect biochemistry and molecular biology.

[363]  V. Rybin,et al.  Decoding of Methylated Histone H3 Tail by the Pygo-BCL9 Wnt Signaling Complex , 2008, Molecular cell.

[364]  R. Shafer,et al.  Heat capacity changes associated with guanine quadruplex formation: An isothermal titration calorimetry study , 2008, Biopolymers.

[365]  L. Fung,et al.  Conformational changes at the tetramerization site of erythroid alpha-spectrin upon binding beta-spectrin: a spin label EPR study. , 2008, Biochemistry.

[366]  A. Cornish-Bowden Enthalpy—entropy compensation: a phantom phenomenon , 2002, Journal of Biosciences.

[367]  S. Magdassi,et al.  Polymer-surfactant interactions: binding mechanism of sodium dodecyl sulfate to poly(diallyldimethylammonium chloride). , 2008, Journal of colloid and interface science.

[368]  Yan Hu,et al.  CHAPTER 3 – Recent Progress in Bimetallic Nanoparticles: Their Preparation, Structures and Functions , 2008 .

[369]  Jisheng Yang,et al.  Calorimetric studies of the interaction between sodium alginate and sodium dodecyl sulfate in dilute solutions at different pH values. , 2008, Carbohydrate research.

[370]  F. Schmidtchen,et al.  A novel synthesis of chiral guanidinium receptors and their use in unfolding the energetics of enantiorecognition of chiral carboxylates. , 2008, The Journal of organic chemistry.

[371]  K. Bouchemal New challenges for pharmaceutical formulations and drug delivery systems characterization using isothermal titration calorimetry. , 2008, Drug discovery today.

[372]  Jin-Mi Jung,et al.  Structure of heat-induced beta-lactoglobulin aggregates and their complexes with sodium-dodecyl sulfate. , 2008, Biomacromolecules.

[373]  Xianchun Zhu,et al.  Cd2+-induced conformational change of a synthetic metallopeptide: slow metal binding followed by a slower conformational change. , 2008, Inorganic chemistry.

[374]  G. S. Kumar,et al.  Molecular aspects on the interaction of phenosafranine to deoxyribonucleic acid: Model for intercalative drug–DNA binding , 2008 .

[375]  G. Makhatadze,et al.  Structural Basis for Putrescine Activation of Human S-Adenosylmethionine Decarboxylase†‡ , 2008, Biochemistry.

[376]  D. Barrick,et al.  Protein folding and stability using denaturants. , 2008, Methods in cell biology.

[377]  P. Tsvetkov,et al.  Stathmin/Op18 is a novel mediator of vinblastine activity , 2008, FEBS letters.

[378]  J. Seelig,et al.  Length dependence of the coil <--> beta-sheet transition in a membrane environment. , 2008, Journal of the American Chemical Society.

[379]  Makoto Suematsu,et al.  Method for determination of association and dissociation rate constants of reversible bimolecular reactions by isothermal titration calorimeters. , 2007, Analytical chemistry.

[380]  Walter Filgueira de Azevedo,et al.  Experimental approaches to evaluate the thermodynamics of protein-drug interactions. , 2008, Current drug targets.

[381]  H. Gibson,et al.  High-yielding, regiospecific synthesis of cis(4,4')-di(carbomethoxybenzo)-30-crown-10, its conversion to a pyridyl cryptand and strong complexation of 2,2'- and 4,4'-bipyridinium derivatives. , 2008, The Journal of organic chemistry.

[382]  A. Surolia,et al.  Recommendations on measurement and analysis of results obtained on biological substances using isothermal titration calorimetry (IUPAC Technical Report) , 2008 .

[383]  I. Jelesarov,et al.  A survey of the year 2007 literature on applications of isothermal titration calorimetry , 2008, Journal of molecular recognition : JMR.

[384]  G. Bai,et al.  Thermodynamics of micellization of alkylimidazolium surfactants in aqueous solution , 2008 .

[385]  M. Kulomaa,et al.  Bradavidin II from Bradyrhizobium japonicum: a new avidin-like biotin-binding protein. , 2008, Biochimica et biophysica acta.

[386]  A. Murphy,et al.  Surface plasmon resonance characterization of calspermin-calmodulin binding kinetics. , 2008, Analytical biochemistry.

[387]  Ireena Bagai,et al.  Direct metal transfer between periplasmic proteins identifies a bacterial copper chaperone. , 2008, Biochemistry.

[388]  Lina Baranauskienė,et al.  Determination of the thermodynamics of carbonic anhydrase acid-unfolding by titration calorimetry. , 2008, Journal of biochemical and biophysical methods.

[389]  A. Saboury,et al.  A Thermodynamic Study on the Binding of Cobalt Ion with Myelin Basic Protein , 2008 .

[390]  C. Thiele,et al.  Recognition of ionic guests by ionic beta-cyclodextrin derivatives. , 2008, Chemistry.

[391]  R. Jerala,et al.  Alexidine and chlorhexidine bind to lipopolysaccharide and lipoteichoic acid and prevent cell activation by antibiotics. , 2008, The Journal of antimicrobial chemotherapy.

[392]  C. Onésippe,et al.  Study of the complex formation between sodium dodecyl sulfate and hydrophobically modified chitosan , 2008 .

[393]  M. Karplus,et al.  The human cytomegalovirus UL44 C clamp wraps around DNA. , 2008, Structure.

[394]  F. Rizzo,et al.  The oxidation behaviour of metals and alloys at high temperatures in atmospheres containing water vapour: A review , 2008 .

[395]  D. Fass,et al.  Self-assembly of bovine beta-casein below the isoelectric pH. , 2008, Journal of agricultural and food chemistry.

[396]  J. Ramos,et al.  Two levels of cooperativeness in the binding of TodT to the tod operon promoter. , 2008, Journal of molecular biology.

[397]  Yen Sun,et al.  Membrane-thinning effect of curcumin. , 2008, Biophysical journal.

[398]  A. Wahid,et al.  Systematic Deletion of the Adenovirus-associated RNAI Terminal Stem Reveals a Surprisingly Active RNA Inhibitor of Double-stranded RNA-activated Protein Kinase* , 2008, Journal of Biological Chemistry.

[399]  T. Nguyen,et al.  Controlling plasma protein binding: structural correlates of interactions of hydrophobic polyamine endotoxin sequestrants with human serum albumin. , 2008, Molecular pharmaceutics.

[400]  J. Mata,et al.  Aggregation Behavior of Pluronic-L64 in Presence of Sodium Dodecyl Sulphate in Water , 2008 .

[401]  T. Lohman,et al.  Kinetic control of Mg2+-dependent melting of duplex DNA ends by Escherichia coli RecBC. , 2008, Journal of molecular biology.

[402]  M. Wilmanns,et al.  Probing lipid- and drug-binding domains with fluorescent dyes. , 2008, Bioorganic & medicinal chemistry.

[403]  F. Schwarz,et al.  Energetic contributions to the initiation of transcription in E. coli. , 2008, Biophysical chemistry.

[404]  B. Pagano,et al.  Targeting DNA quadruplexes with distamycin A and its derivatives: an ITC and NMR study. , 2008, Biochimie.

[405]  A. Tamura,et al.  Significant discrepancies between van't Hoff and calorimetric enthalpies. , 1995, Proceedings of the National Academy of Sciences of the United States of America.

[406]  S. Jackson,et al.  Structural studies on the co-chaperone Hop and its complexes with Hsp90. , 2008, Journal of molecular biology.

[407]  M. Tatham,et al.  Quantitative analysis of multi‐protein interactions using FRET: Application to the SUMO pathway , 2008, Protein science : a publication of the Protein Society.

[408]  J. Ramos,et al.  Hierarchical binding of the TodT response regulator to its multiple recognition sites at the tod pathway operon promoter. , 2008, Journal of molecular biology.

[409]  M. Sogayar,et al.  Glucose-induced heat production, insulin secretion and lactate production in isolated Wistar rat pancreatic islets , 2008 .

[410]  John H. White,et al.  The Orf18 gene product from conjugative transposon Tn916 is an ArdA antirestriction protein that inhibits type I DNA restriction-modification systems. , 2008, Journal of molecular biology.

[411]  G. S. Kumar,et al.  Interaction of Isoquinoline Alkaloid Palmatine with Deoxyribonucleic Acids: Binding Heterogeneity, and Conformational and Thermodynamic Aspects , 2008, Chemistry & biodiversity.

[412]  R. Hodges,et al.  Interaction of gramicidin S and its aromatic amino-acid analog with phospholipid membranes. , 2008, Biophysical journal.

[413]  L. Delbaere,et al.  Structural, Functional and Calorimetric Investigation of MosA, a Dihydrodipicolinate Synthase from Sinorhizobium meliloti L5–30, does not Support Involvement in Rhizopine Biosynthesis , 2008, Chembiochem : a European journal of chemical biology.

[414]  L. Stamatatos,et al.  Comparative evaluation of trimeric envelope glycoproteins derived from subtype C and B HIV-1 R5 isolates. , 2008, Virology.

[415]  D. Beckett Linked equilibria in regulation of transcription initiation. , 2008, Methods in cell biology.

[416]  J. Houtman,et al.  Mono-, bis-, and tris(crown ether)s assembled around 1,3,5-triaroylbenzene scaffolds. , 2008, The Journal of organic chemistry.

[417]  W. Miller,et al.  StAR-like activity and molten globule behavior of StARD6, a male germ-line protein. , 2008, Biochemistry.

[418]  R. Minchin,et al.  The characterization of a novel dendritic system for gene delivery by isothermal titration calorimetry. , 2008, Biopolymers.

[419]  Jennifer L. Martin,et al.  United we stand: combining structural methods. , 2008, Current opinion in structural biology.

[420]  L. Marky,et al.  Thermodynamic contributions of the reactions of DNA intramolecular structures with their complementary strands. , 2008, Biochimie.

[421]  Marc S. Lewis,et al.  Grb2 adaptor undergoes conformational change upon dimerization. , 2008, Archives of biochemistry and biophysics.

[422]  M. Wilmanns,et al.  High-resolution structural analysis of mammalian profilin 2a complex formation with two physiological ligands: the formin homology 1 domain of mDia1 and the proline-rich domain of VASP. , 2008, Journal of molecular biology.

[423]  D. Svergun,et al.  Fab MOR03268 triggers absorption shift of a diagnostic dye via packaging in a solvent-shielded Fab dimer interface. , 2008, Journal of molecular biology.

[424]  Gjertrud Maurstad,et al.  Potentials of bionanotechnology in the study and manufacturing of self-assembled biopolymer complexes and gels , 2008 .

[425]  S. Jeudy,et al.  Structural and functional studies of Nup107/Nup133 interaction and its implications for the architecture of the nuclear pore complex. , 2008, Molecular cell.

[426]  S. Vidal,et al.  NK cell receptors and their MHC class I ligands in host response to cytomegalovirus: insights from the mouse genome. , 2008, Seminars in immunology.

[427]  Johan H. Bredenberg,et al.  Salt-mediated electrostatics in the association of TATA binding proteins to DNA: a combined molecular mechanics/Poisson-Boltzmann study. , 2008, Biophysical journal.

[428]  U. Bunz,et al.  Fluorescence self-quenching of a mannosylated poly(p-phenyleneethynylene) induced by concanavalin A. , 2008, Journal of the American Chemical Society.

[429]  M. Künzler,et al.  Structural basis for chitotetraose coordination by CGL3, a novel galectin-related protein from Coprinopsis cinerea. , 2008, Journal of molecular biology.

[430]  John Calvin Reed,et al.  A TR3/Nur77 Peptide-Based High-Throughput Fluorescence Polarization Screen for Small Molecule Bcl-B Inhibitors , 2008, Journal of biomolecular screening.

[431]  K Ulrich Wendt,et al.  Thermodynamic characterization of allosteric glycogen phosphorylase inhibitors. , 2008, Biochemistry.

[432]  A. Ramamoorthy,et al.  Using Fluorous Amino Acids to Modulate the Biological Activity of an Antimicrobial Peptide , 2008, Chembiochem : a European journal of chemical biology.

[433]  G. S. Kumar,et al.  Spectroscopic and calorimetric studies on the binding of the phototoxic and cytotoxic plant alkaloid sanguinarine with double helical poly(A) , 2008 .

[434]  A. Ramamoorthy,et al.  Using fluorous amino acids to probe the effects of changing hydrophobicity on the physical and biological properties of the beta-hairpin antimicrobial peptide protegrin-1. , 2008, Biochemistry.

[435]  P. K. Gallagher,et al.  Handbook of thermal analysis and calorimetry , 1998 .

[436]  Jianping Ding,et al.  Molecular Basis of the Interaction of Saccharomyces cerevisiae Eaf3 Chromo Domain with Methylated H3K36* , 2008, Journal of Biological Chemistry.

[437]  K. Wilkinson,et al.  Recognition of Polyubiquitin Isoforms by the Multiple Ubiquitin Binding Modules of Isopeptidase T* , 2008, Journal of Biological Chemistry.

[438]  A. Higuchi,et al.  Investigation of the mechanism of beta-amyloid fibril formation by kinetic and thermodynamic analyses. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[439]  F. Schwarz,et al.  Effect of the distal C162S mutation on the energetics of drug binding to p38alpha MAP kinase. , 2008, Archives of biochemistry and biophysics.

[440]  Yu Liu,et al.  Thermodynamics of complexes between nucleobase-modified β-cyclodextrins and bile salts , 2008 .

[441]  N. Buurma,et al.  Rhenium complexes of chromophore-appended dipicolylamine ligands: syntheses, spectroscopic properties, DNA binding and X-ray crystal structure , 2008 .

[442]  Chris Abell,et al.  Inhibition of Mycobacterium tuberculosis Pantothenate Synthetase by Analogues of the Reaction Intermediate , 2008, Chembiochem : a European journal of chemical biology.

[443]  G. Strambini,et al.  Mutations in transhydrogenase change the fluorescence emission state of TRP72 from 1La to 1Lb. , 2008, Biophysical journal.

[444]  C. Schiffer,et al.  Contribution of Ser386 and Ser396 to activation of interferon regulatory factor 3. , 2008, Journal of molecular biology.

[445]  C. Liaw,et al.  Mono-tetrahydrofuran annonaceous acetogenins from Annona squamosa as cytotoxic agents and calcium ion chelators. , 2008, Journal of natural products.

[446]  Jing-Song Fan,et al.  NMR structure and dynamics of human ephrin‐B2 ectodomain: The functionally critical C‐D and G‐H loops are highly dynamic in solution , 2008, Proteins.

[447]  Santosh A. Khedkar,et al.  Binding of Lipoic Acid Induces Conformational Change and Appearance of a New Binding Site in Methylglyoxal Modified Serum Albumin , 2008, The protein journal.

[448]  V. J. Licata,et al.  Prevalence of temperature-dependent heat capacity changes in protein-DNA interactions. , 2008, Biophysical journal.

[449]  J. Andersen,et al.  Ixolaris binding to factor X reveals a precursor state of factor Xa heparin‐binding exosite , 2007, Protein science : a publication of the Protein Society.

[450]  Yi Liang,et al.  Applications of isothermal titration calorimetry in protein science. , 2008, Acta biochimica et biophysica Sinica.

[451]  R. Löbenberg,et al.  The effect of compression forces on the stability of dibasic calcium phosphate dihydrate tablets in the presence of glutamic acid hydrochloride monitored by isothermal calorimetry , 2008 .

[452]  S. Maiti,et al.  Spo0B of Bacillus anthracis – a protein with pleiotropic functions , 2008, The FEBS journal.

[453]  D. Engelman,et al.  Mechanism and uses of a membrane peptide that targets tumors and other acidic tissues in vivo , 2007, Proceedings of the National Academy of Sciences.

[454]  M. Negishi,et al.  The Chondroitin Polymerase K4CP and the Molecular Mechanism of Selective Bindings of Donor Substrates to Two Active Sites* , 2008, Journal of Biological Chemistry.

[455]  Suman Das,et al.  Self-association of the anionic form of the DNA-binding anticancer drug mithramycin. , 2008, The journal of physical chemistry. B.

[456]  Caleb B. McDonald,et al.  Thermodynamic analysis of the heterodimerization of leucine zippers of Jun and Fos transcription factors. , 2008, Biochemical and biophysical research communications.

[457]  P. Chène Challenges in design of biochemical assays for the identification of small molecules to target multiple conformations of protein kinases. , 2008, Drug discovery today.

[458]  Guo-Ping Zhou,et al.  Probing the Interaction between the Coiled Coil Leucine Zipper of cGMP-dependent Protein Kinase Iα and the C Terminus of the Myosin Binding Subunit of the Myosin Light Chain Phosphatase* , 2008, Journal of Biological Chemistry.

[459]  M. Oda,et al.  Exploring the energy landscape of antibody-antigen complexes: protein dynamics, flexibility, and molecular recognition. , 2008, Biochemistry.

[460]  S. Pochapsky,et al.  Solution NMR structure of putidaredoxin-cytochrome P450cam complex via a combined residual dipolar coupling-spin labeling approach suggests a role for Trp106 of putidaredoxin in complex formation. , 2008, Journal of molecular biology.

[461]  F. D. de Sousa,et al.  Supramolecular complex of fluoxetine with beta-cyclodextrin: an experimental and theoretical study. , 2008, International journal of pharmaceutics.

[462]  M J Todd,et al.  Enzyme kinetics determined using calorimetry: a general assay for enzyme activity? , 2001, Analytical biochemistry.

[463]  G. S. Kumar,et al.  Binding of protoberberine alkaloid coralyne with double stranded poly(A): a biophysical study. , 2008, Molecular bioSystems.

[464]  Philip A. Gale,et al.  Cooperative binding of calix[4]pyrrole-anion complexes and alkylammonium cations in halogenated solvents. , 2008, Chemistry.

[465]  F. Schwarz,et al.  Effect of the phosphate substrate on drug-inhibitor binding to human purine nucleoside phosphorylase. , 2008, Archives of biochemistry and biophysics.

[466]  E. Kolehmainen,et al.  Design, synthesis and spectral studies of novel bile acid-arene conjugates: Trans to cis isomerization of azobenzene core controlled by bile acid hydrophobicity , 2008 .

[467]  Erinna F. Lee,et al.  Structure of the BH3 domains from the p53-inducible BH3-only proteins Noxa and Puma in complex with Mcl-1. , 2008, Journal of molecular biology.

[468]  A. Berezov,et al.  Modulation of biomolecular interactions with complex-binding small molecules. , 2008, Methods.

[469]  J. Ladbury,et al.  Survey of the year 2005: literature on applications of isothermal titration calorimetry , 2007, Journal of molecular recognition : JMR.

[470]  Xin Lu,et al.  Biochemical and structural studies of ASPP proteins reveal differential binding to p53, p63, and p73. , 2008, Structure.

[471]  J. Ladbury,et al.  A phosphorylation-dependent gating mechanism controls the SH2 domain interactions of the Shc adaptor protein. , 2008, Journal of molecular biology.

[472]  J. Gavilanes,et al.  Calorimetric scrutiny of lipid binding by sticholysin II toxin mutants. , 2008, Journal of molecular biology.

[473]  A. Stalcup,et al.  Affinity capillary electrophoresis and isothermal titration calorimetry for the determination of fatty acid binding with beta-cyclodextrin. , 2008, Journal of chromatography. A.

[474]  N. Hayashi,et al.  Interaction between the C-terminal region of human myelin basic protein and calmodulin: analysis of complex formation and solution structure , 2008, BMC Structural Biology.

[475]  Y. Wang,et al.  Potential protein toxicity of synthetic pigments: binding of poncean S to human serum albumin. , 2008, Biophysical journal.

[476]  Michael S. Arnold,et al.  Peptide amphiphile nanostructure-heparin interactions and their relationship to bioactivity. , 2008, Biomaterials.

[477]  Hao Xie Activity assay of membrane transport proteins. , 2008, Acta biochimica et biophysica Sinica.

[478]  D. Rognan,et al.  Domain versatility in plant AB‐toxins: Evidence for a local, pH‐dependent rearrangement in the 2γ lectin site of the mistletoe lectin by applying ligand derivatives and modelling , 2008, FEBS letters.

[479]  F. Marken,et al.  Manganese Binding to the Prion Protein* , 2008, Journal of Biological Chemistry.

[480]  Thermodynamics and specificity of the Mbp1-DNA interaction. , 2008, Biochemistry.

[481]  M. Geyer,et al.  The human formin FHOD1 contains a bipartite structure of FH3 and GTPase-binding domains required for activation. , 2008, Structure.

[482]  A. H. Wang,et al.  Crystal structure of IcaR, a repressor of the TetR family implicated in biofilm formation in Staphylococcus epidermidis , 2008, Nucleic acids research.

[483]  D. González-Pacanowska,et al.  Kinetic and thermodynamic characterization of dUTP hydrolysis by Plasmodium falciparum dUTPase. , 2008, Biochimica et biophysica acta.

[484]  D. R. Palmer,et al.  Isothermal titration microcalorimetry reveals the cooperative and noncompetitive nature of inhibition of Sinorhizobium meliloti L5-30 dihydrodipicolinate synthase by (S)-lysine. , 2008, Biochemistry.

[485]  M. Abrahamson,et al.  The human protease inhibitor cystatin C is an activating cofactor for the streptococcal cysteine protease IdeS. , 2008, Chemistry & biology.

[486]  N. Kishore,et al.  Isothermal titration calorimetric and spectroscopic studies on (alcohol + salt) induced partially folded state of α-lactalbumin and its binding with 8-anilino-1-naphthalenesulfonic acid , 2008 .

[487]  B. Luisi,et al.  Reconstitution and analysis of the multienzyme Escherichia coli RNA degradosome. , 2008, Journal of molecular biology.

[488]  S. Grzesiek,et al.  Large-scale expression and purification of the major HIV-1 coreceptor CCR5 and characterization of its interaction with RANTES. , 2008, Protein expression and purification.

[489]  R. Noberini,et al.  Crystal Structure and NMR Binding Reveal That Two Small Molecule Antagonists Target the High Affinity Ephrin-binding Channel of the EphA4 Receptor* , 2008, Journal of Biological Chemistry.

[490]  D. Stammers,et al.  Structural analysis of the recognition of the negative regulator NmrA and DNA by the zinc finger from the GATA-type transcription factor AreA. , 2008, Journal of molecular biology.

[491]  Emmanuel D Levy,et al.  Evolution and dynamics of protein interactions and networks. , 2008, Current opinion in structural biology.

[492]  L. Bouteiller,et al.  Thermodynamic description of bis-urea self-assembly: competition between two supramolecular polymers. , 2008, Langmuir : the ACS journal of surfaces and colloids.

[493]  J. Chaires,et al.  Binding: a polemic and rough guide. , 2008, Methods in cell biology.

[494]  D. Gianolio,et al.  Drug Delivery and Medical Applications of Chemically Modified Hyaluronan , 2008 .

[495]  D. Sidote,et al.  Structure of the Staphylococcus aureus AgrA LytTR domain bound to DNA reveals a beta fold with an unusual mode of binding. , 2008, Structure.

[496]  R. D. Woods,et al.  Geophysical Characterization of Sites , 1994 .

[497]  J. Omichinski,et al.  p53 and TFIIEalpha share a common binding site on the Tfb1/p62 subunit of TFIIH. , 2008, Proceedings of the National Academy of Sciences of the United States of America.

[498]  A. Saboury,et al.  Application of an extended solvation theory to study on the binding of magnesium ion with myelin basic protein , 2008 .

[499]  J. Brask,et al.  Softening of POPC membranes by magainin. , 2008, Biophysical chemistry.

[500]  J. Matthews,et al.  ATP binding equilibria of the Na(+),K(+)-ATPase. , 2008, Biochemistry.

[501]  A. Govindaraj,et al.  A calorimetric investigation of the assembly of gold nanorods to form necklaces , 2008 .

[502]  A. Velázquez‐Campoy,et al.  Isothermal Titration Calorimetry , 2004, Current protocols in cell biology.

[503]  Tjelvar S. G. Olsson,et al.  The thermodynamics of protein-ligand interaction and solvation: insights for ligand design. , 2008, Journal of molecular biology.

[504]  J. Badia,et al.  Quaternary structural transitions in the DeoR-type repressor UlaR control transcriptional readout from the L-ascorbate utilization regulon in Escherichia coli. , 2008, Biochemistry.

[505]  K. Kathir,et al.  A method for the prevention of thrombin-induced degradation of recombinant proteins. , 2008, Analytical biochemistry.

[506]  Thermodynamic analysis of additivity between the heavy and light chains in affinity maturation of an antibody. , 2008, Molecular immunology.

[507]  K. Matuschewski,et al.  Structural basis for parasite-specific functions of the divergent profilin of Plasmodium falciparum. , 2008, Structure.

[508]  Akio Ohta,et al.  Effect of the side chain of N-acyl amino acid surfactants on micelle formation: An isothermal titration calorimetry study , 2008 .

[509]  M. Shirakawa,et al.  Kinetic and thermodynamic evidence for flipping of a methyl-CpG binding domain on methylated DNA. , 2008, Biochemistry.

[510]  Í. Lopes-Cendes,et al.  Characterization of the C-terminal half of human juvenile myoclonic epilepsy protein EFHC1: dimer formation blocks Ca2+ and Mg2+ binding to its functional EF-hand. , 2008, Archives of biochemistry and biophysics.

[511]  P. Permi,et al.  Structural basis of PxxDY motif recognition in SH3 binding. , 2009, Journal of molecular biology.

[512]  R. Raman,et al.  Calcium Binds to Leptospiral Immunoglobulin-like Protein, LigB, and Modulates Fibronectin Binding* , 2008, Journal of Biological Chemistry.

[513]  G. Craciun,et al.  A combinatorial H4 tail library for exploring the histone code. , 2008, Biochemistry.

[514]  W. Loh,et al.  Polysaccharide-based hydrogels: preparation, characterization, and drug interaction behaviour. , 2008, Biomacromolecules.

[515]  Samuel I. Miller,et al.  Structure and function of Salmonella SifA indicate that its interactions with SKIP, SseJ, and RhoA family GTPases induce endosomal tubulation. , 2008, Cell host & microbe.

[516]  Xin Wen,et al.  BindingDB: a web-accessible database of experimentally determined protein–ligand binding affinities , 2006, Nucleic Acids Res..

[517]  Elizabeth E Howell,et al.  A Balancing Act between Net Uptake of Water during Dihydrofolate Binding and Net Release of Water upon NADPH Binding in R67 Dihydrofolate Reductase* , 2008, Journal of Biological Chemistry.

[518]  B. Shilton,et al.  Analysis of the isolated SecA DEAD motor suggests a mechanism for chemical-mechanical coupling. , 2008, Journal of molecular biology.

[519]  D. Becker,et al.  Regulation of PutA-membrane associations by flavin adenine dinucleotide reduction. , 2004, Biochemistry.

[520]  S. Maiti,et al.  Thermodynamics of DNA-RNA heteroduplex formation: effects of locked nucleic acid nucleotides incorporated into the DNA strand. , 2008, Biochemistry.

[521]  J. Gordon,et al.  Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices. , 2008, Structure.

[522]  S. Ciurli,et al.  High-affinity Ni2+ binding selectively promotes binding of Helicobacter pylori NikR to its target urease promoter. , 2008, Journal of molecular biology.

[523]  E. Komives,et al.  The IκBα/NF‐κB complex has two hot spots, one at either end of the interface , 2008, Protein science : a publication of the Protein Society.

[524]  Gordon C K Roberts,et al.  Structural basis for the interaction between the cytoplasmic domain of the hyaluronate receptor layilin and the talin F3 subdomain. , 2008, Journal of molecular biology.

[525]  J Günter Grossmann,et al.  Knotted fusion proteins reveal unexpected possibilities in protein folding. , 2008, Molecular cell.

[526]  A. Saboury,et al.  Interaction of bovine serum albumin with some novel PEG-containing diblock copolymers. , 2008, International journal of biological macromolecules.

[527]  S. Nabuurs,et al.  Features of a twin‐arginine signal peptide required for recognition by a Tat proofreading chaperone , 2008, FEBS letters.

[528]  A. Leonardi,et al.  Conformational stability and DNA binding energetics of the rat thyroid transcription factor 1 homeodomain , 2008, Proteins.

[529]  S. Sahu,et al.  Conserved themes in target recognition by the PAH1 and PAH2 domains of the Sin3 transcriptional corepressor. , 2008, Journal of molecular biology.

[530]  C. Lakemond,et al.  Detection of conformational changes in immunoglobulin G using isothermal titration calorimetry with low-molecular-weight probes. , 2008, Analytical biochemistry.

[531]  J. Poznański,et al.  Interactions of native and modified cyclodextrins with some B-vitamins , 2008 .

[532]  Matthias Buck,et al.  Insights into oncogenic mutations of plexin-B1 based on the solution structure of the Rho GTPase binding domain. , 2008, Structure.

[533]  V. Rivieccio,et al.  Affinity purification of IgG monoclonal antibodies using the D-PAM synthetic ligand: chromatographic comparison with protein A and thermodynamic investigation of the D-PAM/IgG interaction. , 2008, Journal of immunological methods.

[534]  Harjinder Singh,et al.  Milk Protein–Polysaccharide Interactions , 2008 .

[535]  P. Privalov,et al.  Assembling the human IFN-beta enhanceosome in solution. , 2008, Journal of molecular biology.