Recent Microdevice-Based Aptamer Sensors

Since the systematic evolution of ligands by exponential enrichment (SELEX) method was developed, aptamers have made significant contributions as bio-recognition sensors. Microdevice systems allow for low reagent consumption, high-throughput of samples, and disposability. Due to these advantages, there has been an increasing demand to develop microfluidic-based aptasensors for analytical technique applications. This review introduces the principal concepts of aptasensors and then presents some advanced applications of microdevice-based aptasensors on several platforms. Highly sensitive detection techniques, such as electrochemical and optical detection, have been integrated into lab-on-a-chip devices and researchers have moved towards the goal of establishing point-of-care diagnoses for target analyses.

[1]  Gwo-Bin Lee,et al.  Integrated microfluidic device using a single universal aptamer to detect multiple types of influenza viruses. , 2016, Biosensors & bioelectronics.

[3]  Microfluidic chip-based silver nanoparticles aptasensor for colorimetric detection of thrombin. , 2016, Talanta.

[4]  M. Madou,et al.  All-carbon suspended nanowire sensors as a rapid highly-sensitive label-free chemiresistive biosensing platform. , 2018, Biosensors & bioelectronics.

[5]  N. Min,et al.  Covalent attachment of biomacromolecules to plasma-patterned and functionalized carbon nanotube-based devices for electrochemical biosensing. , 2012, Bioconjugate chemistry.

[6]  Gwo-Bin Lee,et al.  An integrated microfluidic system for rapid screening of alpha-fetoprotein-specific aptamers. , 2012, Biosensors & bioelectronics.

[7]  Ning Gan,et al.  A label-free and universal platform for antibiotics detection based on microchip electrophoresis using aptamer probes. , 2017, Talanta.

[8]  G. Cigliana,et al.  Ultrasensitive detection of lysozyme in droplet-based microfluidic devices. , 2018, Biosensors & bioelectronics.

[9]  Anja Boisen,et al.  Lab-on-a-disc agglutination assay for protein detection by optomagnetic readout and optical imaging using nano- and micro-sized magnetic beads. , 2016, Biosensors & bioelectronics.

[10]  Narayanan Madaboosi,et al.  DNA aptamer-based sandwich microfluidic assays for dual quantification and multi-glycan profiling of cancer biomarkers. , 2016, Biosensors & bioelectronics.

[11]  Yun Zhang,et al.  Naked-eye quantitative aptamer-based assay on paper device. , 2016, Biosensors & bioelectronics.

[12]  K. Ren,et al.  Materials for microfluidic chip fabrication. , 2013, Accounts of chemical research.

[13]  Nancy Kelley-Loughnane,et al.  Aptamer-functionalized nanoparticles for surface immobilization-free electrochemical detection of cortisol in a microfluidic device. , 2016, Biosensors & bioelectronics.

[14]  L. Gold,et al.  Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymerase. , 1990, Science.

[15]  Jin Ho Jung,et al.  Acoustic Wave-Driven Functionalized Particles for Aptamer-Based Target Biomolecule Separation. , 2017, Analytical chemistry.

[16]  M. DeRosa,et al.  Aptamer-based sandwich assay for on chip detection of Ochratoxin A by an array of amorphous silicon photosensors , 2016 .

[17]  Donny Nugraha Mazaafrianto,et al.  Label-Free Electrochemical Sensor for Ochratoxin A Using a Microfabricated Electrode with Immobilized Aptamer , 2018, ACS Omega.

[18]  Shabir Hassan,et al.  Microfluidic-integrated DNA nanobiosensors. , 2016, Biosensors & bioelectronics.

[19]  Scott P. White,et al.  Rapid, Selective, Label-Free Aptameric Capture and Detection of Ricin in Potable Liquids Using a Printed Floating Gate Transistor , 2016 .

[20]  M. Stojanović,et al.  INTEGRATED MICROFLUIDIC SELEX USING FREE SOLUTION ELECTROKINETICS. , 2017, Journal of the Electrochemical Society.

[21]  Yan Zhang,et al.  Application of ZnO/graphene and S6 aptamers for sensitive photoelectrochemical detection of SK-BR-3 breast cancer cells based on a disposable indium tin oxide device. , 2014, Biosensors & bioelectronics.

[22]  Gwo-Bin Lee,et al.  An automatic microfluidic system for rapid screening of cancer stem-like cell-specific aptamers , 2013 .

[23]  Zhi Zhu,et al.  Target-responsive DNA hydrogel mediated "stop-flow" microfluidic paper-based analytic device for rapid, portable and visual detection of multiple targets. , 2015, Analytical chemistry.

[24]  Ning Gan,et al.  Novel label-free and high-throughput microchip electrophoresis platform for multiplex antibiotic residues detection based on aptamer probes and target catalyzed hairpin assembly for signal amplification. , 2017, Biosensors & bioelectronics.

[25]  Sean K. Dembowski,et al.  Microfluidic methods for aptamer selection and characterization. , 2018, The Analyst.

[26]  Jun Wang,et al.  Label-free okadaic acid detection using growth of gold nanoparticles in sensor gaps as a conductive tag , 2017, Biomedical microdevices.

[27]  Jin-Ming Lin,et al.  Assay of multiplex proteins from cell metabolism based on tunable aptamer and microchip electrophoresis. , 2015, Biosensors & bioelectronics.

[28]  Alex Toftgaard Nielsen,et al.  Comparative study on aptamers as recognition elements for antibiotics in a label-free all-polymer biosensor. , 2013, Biosensors & bioelectronics.

[29]  Chih-Hung Wang,et al.  Integrated microfluidic system for rapid detection of influenza H1N1 virus using a sandwich-based aptamer assay. , 2016, Biosensors & bioelectronics.

[30]  Jinghua Yu,et al.  Microfluidic Paper-based Analytical Device for Sensitive Detection of Peptides Based on Specific Recognition of Aptamer and Amplification Strategy of Hybridization Chain Reaction , 2017 .

[31]  Min Su,et al.  Aptamer-based fluorescent and visual biosensor for multiplexed monitoring of cancer cells in microfluidic paper-based analytical devices , 2016 .

[32]  Wei Duan,et al.  A Surface-Stress-Based Microcantilever Aptasensor , 2014, IEEE Transactions on Biomedical Circuits and Systems.

[33]  G. Whitesides,et al.  Patterned paper as a platform for inexpensive, low-volume, portable bioassays. , 2007, Angewandte Chemie.

[34]  Zeng-Shan Liu,et al.  Preparation of a Specific ssDNA Aptamer for Brevetoxin-2 Using SELEX , 2016, Journal of analytical methods in chemistry.

[35]  Aptamer-based microchip electrophoresis assays for amplification detection of carcinoembryonic antigen. , 2015, Clinica chimica acta; international journal of clinical chemistry.

[36]  Yanling Song,et al.  Portable visual quantitative detection of aflatoxin B1 using a target-responsive hydrogel and a distance-readout microfluidic chip. , 2016, Lab on a chip.

[37]  Jin-Ming Lin,et al.  Determination of cell metabolite VEGF₁₆₅ and dynamic analysis of protein-DNA interactions by combination of microfluidic technique and luminescent switch-on probe. , 2016, Biosensors & bioelectronics.

[38]  Weihong Tan,et al.  Aptamer-enabled efficient isolation of cancer cells from whole blood using a microfluidic device. , 2012, Analytical chemistry.

[39]  Jing Ye,et al.  Fluorescent aptasensor for 17β-estradiol determination based on gold nanoparticles quenching the fluorescence of Rhodamine B. , 2017, Analytical biochemistry.

[40]  He Zhang,et al.  Aptamer-based microfluidic beads array sensor for simultaneous detection of multiple analytes employing multienzyme-linked nanoparticle amplification and quantum dots labels. , 2014, Biosensors & bioelectronics.

[41]  XiuJun Li,et al.  A PDMS/paper/glass hybrid microfluidic biochip integrated with aptamer-functionalized graphene oxide nano-biosensors for one-step multiplexed pathogen detection. , 2013, Lab on a chip.

[42]  Gwo-Bin Lee,et al.  Microfluidic platforms for discovery and detection of molecular biomarkers , 2014 .

[43]  Zhi Zhu,et al.  Integration of target responsive hydrogel with cascaded enzymatic reactions and microfluidic paper-based analytic devices (µPADs) for point-of-care testing (POCT). , 2016, Biosensors & bioelectronics.

[44]  M. Nikolski,et al.  Aptamer selection by direct microfluidic recovery and surface plasmon resonance evaluation. , 2016, Biosensors & bioelectronics.

[45]  Yong Tae Kim,et al.  Combination of a Sample Pretreatment Microfluidic Device with a Photoluminescent Graphene Oxide Quantum Dot Sensor for Trace Lead Detection. , 2015, Analytical chemistry.

[46]  Isolation of thermally sensitive protein-binding oligonucleotides on a microchip , 2015, Microfluidics and nanofluidics.

[47]  Uda Hashim,et al.  Aptamer-based 'point-of-care testing'. , 2016, Biotechnology advances.

[48]  Xiangyou Wang,et al.  An interdigital array microelectrode aptasensor based on multi-walled carbon nanotubes for detection of tetracycline , 2017, Bioprocess and Biosystems Engineering.

[49]  Y. Liu,et al.  Micropatterned aptasensors for continuous monitoring of cytokine release from human leukocytes. , 2011, Analytical chemistry.

[50]  Microfluidic chip system for the selection and enrichment of cell binding aptamers. , 2015, Biomicrofluidics.

[51]  Man Bock Gu,et al.  A new lateral flow strip assay (LFSA) using a pair of aptamers for the detection of Vaspin. , 2017, Biosensors & bioelectronics.

[52]  H. Hibino,et al.  On-chip FRET Graphene Oxide Aptasensor: Quantitative Evaluation of Enhanced Sensitivity by Aptamer with a Double-stranded DNA Spacer , 2015, Analytical Sciences.

[53]  Yi Xiao,et al.  Improving aptamer selection efficiency through volume dilution, magnetic concentration, and continuous washing in microfluidic channels. , 2011, Analytical chemistry.

[54]  Marco PC Marques,et al.  Bioprocess microfluidics: applying microfluidic devices for bioprocessing , 2017, Current opinion in chemical engineering.

[55]  Sihui Zhan,et al.  Interfacial nano-biosensing in microfluidic droplets for high-sensitivity detection of low-solubility molecules. , 2016, Chemical communications.

[56]  Shoji Takeuchi,et al.  Rapid detection of a cocaine-binding aptamer using biological nanopores on a chip. , 2011, Journal of the American Chemical Society.

[57]  Liling Hao,et al.  Graphene oxide-assisted non-immobilized SELEX of okdaic acid aptamer and the analytical application of aptasensor , 2016, Scientific Reports.

[58]  L. Que,et al.  Detection of plant hormone abscisic acid (ABA) using an optical aptamer-based sensor with a microfluidics capillary interface , 2017, 2017 IEEE 30th International Conference on Micro Electro Mechanical Systems (MEMS).

[59]  Katrina Campbell,et al.  First report of the use of a saxitoxin-protein conjugate to develop a DNA aptamer to a small molecule toxin. , 2013, Toxicon : official journal of the International Society on Toxinology.

[60]  Lianghua Wang,et al.  Gonyautoxin 1/4 aptamers with high-affinity and high-specificity: From efficient selection to aptasensor application. , 2016, Biosensors & bioelectronics.

[61]  Hadi Mirzajani,et al.  A highly sensitive and specific capacitive aptasensor for rapid and label-free trace analysis of Bisphenol A (BPA) in canned foods. , 2017, Biosensors & bioelectronics.

[62]  Lixue Wang,et al.  Detection of single tumor cell resistance with aptamer biochip. , 2012, Oncology letters.

[63]  A. Varenne,et al.  Aptamer-conjugated nanoparticles: preservation of targeting functionality demonstrated by microchip electrophoresis in frontal mode. , 2013, Analytical biochemistry.

[64]  Michael Blank,et al.  Aptamer Selection Technology and Recent Advances , 2015, Molecular therapy. Nucleic acids.

[65]  Xuexia Lin,et al.  A portable microchip for ultrasensitive and high-throughput assay of thrombin by rolling circle amplification and hemin/G-quadruplex system. , 2014, Biosensors & bioelectronics.

[66]  Shaojun Dong,et al.  Resistance-based logic aptamer sensor for CCRF-CEM and Ramos cells integrated on microfluidic chip , 2015 .

[67]  Meihua Yang,et al.  An aptamer based lateral flow strip for on-site rapid detection of ochratoxin A in Astragalus membranaceus. , 2016, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

[68]  Jinghua Yu,et al.  A microfluidic origami electrochemiluminescence aptamer-device based on a porous Au-paper electrode and a phenyleneethynylene derivative. , 2013, Chemical communications.

[69]  Jie Deng,et al.  Nanoimprinted thrombin aptasensor with picomolar sensitivity based on plasmon excited quantum dots , 2015 .

[70]  Xuan Weng,et al.  Aptamer-based fluorometric determination of norovirus using a paper-based microfluidic device , 2017, Microchimica Acta.

[71]  François Lagugné-Labarthet,et al.  Microfluidic channel with embedded SERS 2D platform for the aptamer detection of ochratoxin A , 2013, Analytical and Bioanalytical Chemistry.

[72]  Yun Zhang,et al.  Using the Rubik's Cube to directly produce paper analytical devices for quantitative point-of-care aptamer-based assays. , 2017, Biosensors & bioelectronics.

[73]  Simon Chi-Chin Shiu,et al.  A portable microfluidic Aptamer-Tethered Enzyme Capture (APTEC) biosensor for malaria diagnosis. , 2018, Biosensors & bioelectronics.

[74]  Zimple Matharu,et al.  Detecting Transforming Growth Factor-β Release from Liver Cells Using an Aptasensor Integrated with Microfluidics , 2014, Analytical chemistry.

[75]  Qiao Lin,et al.  Integrated Microfluidic Aptasensor for Mass Spectrometric Detection of Vasopressin in Human Plasma Ultrafiltrate. , 2016, Analytical methods : advancing methods and applications.

[76]  Yan Su,et al.  A Microfluidic Love-Wave Biosensing Device for PSA Detection Based on an Aptamer Beacon Probe , 2015, Sensors.

[77]  J. Szostak,et al.  In vitro selection of RNA molecules that bind specific ligands , 1990, Nature.

[78]  L. Que,et al.  An aptamer nanopore-enabled microsensor for detection of theophylline. , 2018, Biosensors & bioelectronics.

[79]  Zheng Wang,et al.  Aptamer‐based thrombin assay on microfluidic platform , 2013, Electrophoresis.

[80]  Qiao Lin,et al.  An Integrated Microfluidic SELEX Approach Using Combined Electrokinetic and Hydrodynamic Manipulation , 2017, SLAS technology.

[81]  Chia-Chen Chang,et al.  Disposable surface plasmon resonance aptasensor with membrane-based sample handling design for quantitative interferon-gamma detection. , 2014, Lab on a chip.

[82]  Ailiang Chen,et al.  Replacing antibodies with aptamers in lateral flow immunoassay. , 2015, Biosensors & bioelectronics.

[83]  Gwo-Bin Lee,et al.  An integrated microfluidic system for measurement of glycated hemoglobin levels by using an aptamer-antibody assay on magnetic beads. , 2015, Biosensors & bioelectronics.

[84]  Xuewen Lu,et al.  A sensitive lateral flow biosensor for Escherichia coli O157:H7 detection based on aptamer mediated strand displacement amplification. , 2015, Analytica chimica acta.

[85]  H. Ho,et al.  An Assay Using Localized Surface Plasmon Resonance and Gold Nanorods Functionalized with Aptamers to Sense the Cytochrome-c Released from Apoptotic Cancer Cells for Anti-Cancer Drug Effect Determination , 2017, Micromachines.

[86]  Gwo-Bin Lee,et al.  Influenza A virus-specific aptamers screened by using an integrated microfluidic system. , 2014, Lab on a chip.

[87]  Gwo-Bin Lee,et al.  On-chip, aptamer-based sandwich assay for detection of glycated hemoglobins via magnetic beads. , 2016, Biosensors & bioelectronics.

[88]  Han Wei Hou,et al.  Identification of malaria parasite-infected red blood cell surface aptamers by inertial microfluidic SELEX (I-SELEX) , 2015, Scientific Reports.

[89]  Yi Liu,et al.  Enhanced and Differential Capture of Circulating Tumor Cells from Lung Cancer Patients by Microfluidic Assays Using Aptamer Cocktail. , 2016, Small.

[90]  Rijun Gui,et al.  Facilely self-assembled magnetic nanoparticles/aptamer/carbon dots nanocomposites for highly sensitive up-conversion fluorescence turn-on detection of tetrodotoxin. , 2018, Talanta.

[91]  Yi Lu,et al.  Aptamer-based origami paper analytical device for electrochemical detection of adenosine. , 2012, Angewandte Chemie.

[92]  Suresh Neethirajan,et al.  Microfluidic platform integrated with graphene-gold nano-composite aptasensor for one-step detection of norovirus. , 2017, Biosensors & bioelectronics.

[93]  Ming Zhou,et al.  Microfluidic electrochemical aptameric assay integrated on-chip: a potentially convenient sensing platform for the amplified and multiplex analysis of small molecules. , 2011, Analytical chemistry.

[94]  Chengcheng Liu,et al.  Microfluidic chip-based aptasensor for amplified electrochemical detection of human thrombin , 2010 .

[95]  S. Jayasena Aptamers: an emerging class of molecules that rival antibodies in diagnostics. , 1999, Clinical chemistry.

[96]  Yanbin Li,et al.  An Impedance Aptasensor with Microfluidic Chips for Specific Detection of H5N1 Avian Influenza Virus , 2015, Sensors.

[97]  Takashi Yoneda,et al.  PEP-on-DEP: A competitive peptide-based disposable electrochemical aptasensor for renin diagnostics. , 2016, Biosensors & bioelectronics.

[98]  Qian Wang,et al.  Highly sensitive and homogeneous detection of membrane protein on a single living cell by aptamer and nicking enzyme assisted signal amplification based on microfluidic droplets. , 2014, Analytical chemistry.

[99]  Mao Ye,et al.  Aptamers: novel diagnostic and therapeutic tools for diabetes mellitus and metabolic diseases , 2017, Journal of Molecular Medicine.

[100]  M. Bowser,et al.  Isolating single stranded DNA using a microfluidic dialysis device. , 2014, The Analyst.

[101]  Xuan Weng,et al.  Paper‐based microfluidic aptasensor for food safety , 2018 .

[102]  Weihong Tan,et al.  Multivalent DNA nanospheres for enhanced capture of cancer cells in microfluidic devices. , 2013, ACS nano.

[103]  Claudio Piemonte,et al.  SPAD aptasensor for the detection of circulating protein biomarkers. , 2015, Biosensors & bioelectronics.

[104]  Suresh Neethirajan,et al.  Detection of protein kinase using an aptamer on a microchip integrated electrolyte-insulator-semiconductor sensor , 2017 .

[105]  H. Hibino,et al.  On-chip graphene oxide aptasensor for multiple protein detection. , 2015, Analytica chimica acta.

[106]  Homayoun Najjaran,et al.  Microfluidics Integrated Biosensors: A Leading Technology towards Lab-on-a-Chip and Sensing Applications , 2015, Sensors.