Single cell analytics: an overview.
暂无分享,去创建一个
[1] R. Zare,et al. Chemical cytometry on a picoliter-scale integrated microfluidic chip. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[2] David A Michels,et al. Capillary sieving electrophoresis/micellar electrokinetic capillary chromatography for two-dimensional protein fingerprinting of single mammalian cells. , 2004, Analytical chemistry.
[3] D. Chiu,et al. High-throughput capillary-electrophoresis analysis of the contents of a single mitochondria. , 2009, Analytical chemistry.
[4] Y. Minami,et al. Ror2 modulates the canonical Wnt signaling in lung epithelial cells through cooperation with Fzd2 , 2008, BMC Molecular Biology.
[5] Michael R. Speicher,et al. High resolution array-CGH analysis of single cells , 2006, Nucleic acids research.
[6] A. Manz,et al. Concomitant detection of CYP1A1 enzymatic activity and CYP1A1 protein in individual cells of a human urothelial cell line using a bilayer microfluidic device , 2008, Analytical and bioanalytical chemistry.
[7] R. Milo,et al. Dynamic Proteomics of Individual Cancer Cells in Response to a Drug , 2008, Science.
[8] S. Quake,et al. Sequence information can be obtained from single DNA molecules , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[9] Live single-cell metabolomics of tryptophan and histidine metabolites in a rat basophil leukemia cell. , 2008, Analytical sciences : the international journal of the Japan Society for Analytical Chemistry.
[10] Pierre Thibault,et al. Integrated microfluidic device for mass spectrometry-based proteomics and its application to biomarker discovery programs. , 2005, Analytical chemistry.
[11] Roger S Lasken,et al. Whole genome amplification: abundant supplies of DNA from precious samples or clinical specimens. , 2003, Trends in biotechnology.
[12] Roger S Lasken,et al. Unbiased whole-genome amplification directly from clinical samples. , 2003, Genome research.
[13] David A Michels,et al. Fully Automated Two-dimensional Capillary Electrophoresis for High Sensitivity Protein Analysis* , 2002, Molecular & Cellular Proteomics.
[14] M. Sauer,et al. Single molecule DNA sequencing in submicrometer channels: state of the art and future prospects. , 2001, Journal of biotechnology.
[15] Jonathan V Sweedler,et al. Characterizing peptides in individual mammalian cells using mass spectrometry , 2007, Nature Protocols.
[16] W. Frommer,et al. Rapid Metabolism of Glucose Detected with FRET Glucose Nanosensors in Epidermal Cells and Intact Roots of Arabidopsis RNA-Silencing Mutants[W][OA] , 2006, The Plant Cell Online.
[17] A. Hartmann,et al. Multiple mutation analyses in single tumor cells with improved whole genome amplification. , 1999, The American journal of pathology.
[18] U. Sauer,et al. Large-scale 13C-flux analysis reveals mechanistic principles of metabolic network robustness to null mutations in yeast , 2005, Genome Biology.
[19] E. Cox,et al. Real-Time Kinetics of Gene Activity in Individual Bacteria , 2005, Cell.
[20] Roger S Lasken,et al. Genomic DNA amplification by the multiple displacement amplification (MDA) method. , 2009, Biochemical Society transactions.
[21] J Christopher Love,et al. Massively parallel detection of gene expression in single cells using subnanolitre wells. , 2010, Lab on a chip.
[22] J. Dragavon,et al. A cellular isolation system for real-time single-cell oxygen consumption monitoring , 2008, Journal of The Royal Society Interface.
[23] R. Aebersold,et al. Mass spectrometry-based proteomics , 2003, Nature.
[24] Adrian Ozinsky,et al. Resolving Cell Population Heterogeneity: Real-Time PCR for Simultaneous Multiplexed Gene Detection in Multiple Single-Cell Samples , 2009, PloS one.
[25] Godfrey L. Smith,et al. Ultra-low-volume, real-time measurements of lactate from the single heart cell using microsystems technology. , 2002, Analytical chemistry.
[26] M. Moini,et al. Separation and detection of the α- and β-chains of hemoglobin of a single intact red blood cell using capillary electrophoresis/electrospray ionization time-of-flight mass spectrometry , 1999 .
[27] Robert H Singer,et al. Materials and Methods Som Text Figs. S1 to S8 References and Notes Dynamics of Single Mrnps in Nuclei of Living Cells , 2022 .
[28] H. Takabayashi,et al. Whole genome amplification from single cells in preimplantation genetic diagnosis and prenatal diagnosis. , 2007, European journal of obstetrics, gynecology, and reproductive biology.
[29] N. Friedman,et al. Stochastic protein expression in individual cells at the single molecule level , 2006, Nature.
[30] N. Dovichi,et al. Detection of green fluorescent protein in a single bacterium by capillary electrophoresis with laser-induced fluorescence. , 2007, Analytical chemistry.
[31] L. Wangh,et al. Differential pattern of Xist RNA accumulation in single blastomeres isolated from 8‐cell stage mouse embryos following laser zona drilling , 2003, Molecular reproduction and development.
[32] Martin Hemberg,et al. Quantification of mRNA in single cells and modelling of RT-qPCR induced noise , 2008, BMC Molecular Biology.
[33] Thierry Emonet,et al. Real-time RNA profiling within a single bacterium. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[34] Uwe Sauer,et al. Comparison of quantitative metabolite imaging tools and carbon-13 techniques for fluxomics. , 2009, Methods in molecular biology.
[35] S. Müller,et al. Functional single-cell analyses: flow cytometry and cell sorting of microbial populations and communities. , 2010, FEMS microbiology reviews.
[36] Chunyang Zhang,et al. Comparative quantification of nucleic acids using single-molecule detection and molecular beacons. , 2005, The Analyst.
[37] T. Hübschmann,et al. Advanced tool for characterization of microbial cultures by combining cytomics and proteomics , 2010, Applied Microbiology and Biotechnology.
[38] H. Sahm,et al. Isolation and prominent characteristics of an L-lysine hyperproducing strain of Corynebacterium glutamicum , 1992, Applied Microbiology and Biotechnology.
[39] K. Miyashiro,et al. mRNA Expression Analysis of Tissue Sections and Single Cells , 2001, The Journal of Neuroscience.
[40] Wolfgang Gärtner,et al. Reporter proteins for in vivo fluorescence without oxygen , 2007, Nature Biotechnology.
[41] M. Kirk,et al. Cellular and synaptic morphology of a feeding motor circuit in Aplysia californica , 1987, The Journal of comparative neurology.
[42] Ido Golding,et al. RNA dynamics in live Escherichia coli cells. , 2004, Proceedings of the National Academy of Sciences of the United States of America.
[43] Xuemei Sun,et al. Catalysis-electrochemical determination of zeptomole enzyme and its application for single-cell analysis. , 2003, Analytical chemistry.
[44] Helene Andersson,et al. Microtechnologies and nanotechnologies for single-cell analysis. , 2004, Current opinion in biotechnology.
[45] Li Jin,et al. Genome amplification of single sperm using multiple displacement amplification , 2005, Nucleic acids research.
[46] Deirdre R. Meldrum,et al. A New Approach for Measuring Single-Cell Oxygen Consumption Rates , 2008, IEEE Transactions on Automation Science and Engineering.
[47] I. Polejaeva,et al. Amplification of nanogram amounts of total RNA by the SMART-based PCR method for high-density oligonucleotide microarrays. , 2005, Clinical chemistry.
[48] Wei-Hua Huang,et al. Recent advances in single-cell analysis using capillary electrophoresis and microfluidic devices. , 2008, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.
[49] Stephen Quake,et al. A nanoliter rotary device for polymerase chain reaction , 2002, Electrophoresis.
[50] J. Ballantyne,et al. Whole genome amplification strategy for forensic genetic analysis using single or few cell equivalents of genomic DNA. , 2005, Analytical biochemistry.
[51] Matthias Heinemann,et al. Mass spectrometric method for analyzing metabolites in yeast with single cell sensitivity. , 2008, Angewandte Chemie.
[52] Andreas Schmid,et al. The Envirostat - a new bioreactor concept. , 2009, Lab on a chip.
[53] N. Dovichi,et al. Metabolic cytometry. Glycosphingolipid metabolism in single cells. , 2007, Analytical chemistry.
[54] Sherrif F Ibrahim,et al. Flow cytometry and cell sorting. , 2013, Advances in biochemical engineering/biotechnology.
[55] P. Rorsman,et al. Gene expression profiling in single cells from the pancreatic islets of Langerhans reveals lognormal distribution of mRNA levels. , 2005, Genome research.
[56] Andreas Schmid,et al. Chemical and biological single cell analysis. , 2010, Current opinion in biotechnology.
[57] T. Ochiya,et al. Single Cell Genomics , 2021, Handbook of Single-Cell Technologies.
[58] Martin T. Suchorolski,et al. A microwell array device capable of measuring single-cell oxygen consumption rates. , 2009, Sensors and actuators. B, Chemical.
[59] S. Kingsmore,et al. Comprehensive human genome amplification using multiple displacement amplification , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[60] Mark Bachman,et al. Fast electrical lysis of cells for capillary electrophoresis. , 2003, Analytical chemistry.
[61] Trevor L Hawkins,et al. Whole genome amplification--applications and advances. , 2002, Current opinion in biotechnology.
[62] L. Blank,et al. Towards real time analysis of protein secretion from single cells. , 2009, Lab on a chip.
[63] Anders Ståhlberg,et al. Single-cell gene expression profiling using reverse transcription quantitative real-time PCR. , 2010, Methods.
[64] Susann Müller,et al. Viability states of bacteria—Specific mechanisms of selected probes , 2010, Cytometry. Part A : the journal of the International Society for Analytical Cytology.
[65] C. Jeon,et al. Development of microbial genome-probing microarrays using digital multiple displacement amplification of uncultivated microbial single cells. , 2008, Environmental science & technology.
[66] T. Egli,et al. Influence of size, shape, and flexibility on bacterial passage through micropore membrane filters. , 2008, Environmental science & technology.
[67] Hagan Bayley,et al. Toward single molecule DNA sequencing: direct identification of ribonucleoside and deoxyribonucleoside 5'-monophosphates by using an engineered protein nanopore equipped with a molecular adapter. , 2006 .
[68] Roger S Lasken,et al. Single-cell genomic sequencing using Multiple Displacement Amplification. , 2007, Current opinion in microbiology.
[69] C. Zhang,et al. Preimplantation genetic diagnosis for Duchenne muscular dystrophy by multiple displacement amplification. , 2009, Fertility and sterility.
[70] O. Pereira-smith,et al. Microfluidics device for single cell gene expression analysis in Saccharomyces cerevisiae , 2006, Yeast.
[71] Richard D. Smith,et al. Nanoscale proteomics : Liquid chromatography-mass spectrometry , 2004 .
[72] Gregory T. Roman,et al. Single-cell manipulation and analysis using microfluidic devices , 2006, Analytical and bioanalytical chemistry.
[73] Zhao-Lun Fang,et al. Integration of single cell injection, cell lysis, separation and detection of intracellular constituents on a microfluidic chip. , 2004, Lab on a chip.
[74] H. Yeh,et al. Single-quantum-dot-based DNA nanosensor , 2005, Nature materials.
[75] F. Van Wambeke,et al. Detection of extracellular phosphatase activity at the single‐cell level by enzyme‐labeled fluorescence and flow cytometry: The importance of time kinetics in ELFA labeling , 2009, Cytometry. Part A : the journal of the International Society for Analytical Cytology.
[76] A. Ewing,et al. Analysis of single cells with capillary electrophoresis electrospray ionization Fourier transform ion cyclotron resonance mass spectrometry. , 1996, Rapid communications in mass spectrometry : RCM.
[77] E. Yeung,et al. Capillary-based fully integrated and automated system for nanoliter polymerase chain reaction analysis directly from cheek cells. , 2001, Journal of chromatography. A.
[78] H. Hauri,et al. Visualization of protein interactions inside the secretory pathway. , 2007, Biochemical Society transactions.
[79] Bo Huang,et al. Counting Low-Copy Number Proteins in a Single Cell , 2007, Science.
[80] N. Allbritton,et al. Chemical analysis of single cells. , 2008, Annual review of analytical chemistry.
[81] Vincent Studer,et al. A nanoliter-scale nucleic acid processor with parallel architecture , 2004, Nature Biotechnology.
[82] J. Sweedler,et al. In situ sequencing of peptides from biological tissues and single cells using MALDI-PSD/CID analysis. , 1999, Analytical chemistry.
[83] D. Hinkle,et al. Single neurons as experimental systems in molecular biology , 2004, Progress in Neurobiology.
[84] W. Jin,et al. Analysis of amino acids in individual human erythrocytes by capillary electrophoresis with electroporation for intracellular derivatization and laser‐induced fluorescence detection , 2004, Electrophoresis.
[85] Chih-Ming Ho,et al. Single-molecule tracing on a fluidic microchip for quantitative detection of low-abundance nucleic acids. , 2005, Journal of the American Chemical Society.
[86] Ruedi Aebersold,et al. Identification of proteins in single-cell capillary electrophoresis fingerprints based on comigration with standard proteins. , 2003, Analytical chemistry.
[87] A. Malek,et al. Expression and analysis of green fluorescent proteins in human embryonic kidney cells by capillary electrophoresis. , 1999, Analytical biochemistry.
[88] X. Xie,et al. Probing Gene Expression in Live Cells, One Protein Molecule at a Time , 2006, Science.
[89] N. Rothman,et al. Comparison of yield and genotyping performance of multiple displacement amplification and OmniPlex™ whole genome amplified DNA generated from multiple DNA sources , 2005, Human mutation.
[90] Jennifer N. Greeson,et al. Assessment of prestin self-association using fluorescence resonance energy transfer , 2006, Brain Research.
[91] M E Belov,et al. Zeptomole-sensitivity electrospray ionization--Fourier transform ion cyclotron resonance mass spectrometry of proteins. , 2000, Analytical chemistry.
[92] Godfrey L. Smith,et al. Metabolic monitoring of the electrically stimulated single heart cell within a microfluidic platform. , 2006, Lab on a chip.
[93] Hideo Nakano,et al. High-throughput, cloning-independent protein library construction by combining single-molecule DNA amplification with in vitro expression. , 2002, Journal of molecular biology.
[94] Igor L. Medintz,et al. Single-molecule DNA amplification and analysis in an integrated microfluidic device. , 2001, Analytical chemistry.
[95] Tomoharu Kajiyama,et al. Quantitative analysis of gene expression in a single cell by qPCR , 2009, Nature Methods.
[96] Ralph G Nuzzo,et al. Mass spectrometric imaging of peptide release from neuronal cells within microfluidic devices. , 2007, Lab on a chip.
[97] Jens Nielsen,et al. Metabolic footprinting in microbiology: methods and applications in functional genomics and biotechnology. , 2008, Trends in biotechnology.
[98] V G Cheung,et al. Whole genome amplification using a degenerate oligonucleotide primer allows hundreds of genotypes to be performed on less than one nanogram of genomic DNA. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[99] N. Dovichi,et al. One-dimensional protein analysis of an HT29 human colon adenocarcinoma cell. , 2000, Analytical chemistry.
[100] Thomas Hankemeier,et al. Microbial metabolomics: toward a platform with full metabolome coverage. , 2007, Analytical biochemistry.
[101] R. Lasken,et al. Genomic DNA Amplification from a Single Bacterium , 2005, Applied and Environmental Microbiology.
[102] Alexandra Ros,et al. Single cell manipulation, analytics, and label‐free protein detection in microfluidic devices for systems nanobiology , 2005, Electrophoresis.
[103] P. Meltzer,et al. T7-based linear amplification of low concentration mRNA samples using beads and microfluidics for global gene expression measurements. , 2009, Lab on a chip.
[104] H. Markram,et al. Correlation maps allow neuronal electrical properties to be predicted from single-cell gene expression profiles in rat neocortex. , 2004, Cerebral cortex.
[105] Alexandra Ros,et al. Single cell analysis in full body quartz glass chips with native UV laser-induced fluorescence detection. , 2008, Journal of chromatography. A.
[106] N. Dovichi,et al. Correlating cell cycle with metabolism in single cells: combination of image and metabolic cytometry. , 1999, Cytometry.
[107] M. Heller,et al. Preparation and hybridization analysis of DNA/RNA from E. coli on microfabricated bioelectronic chips , 1998, Nature Biotechnology.
[108] J. Derisi,et al. Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise , 2006, Nature.
[109] Nikola Tolić,et al. Ultrasensitive proteomics using high-efficiency on-line micro-SPE-nanoLC-nanoESI MS and MS/MS. , 2004, Analytical chemistry.
[110] W. Jin,et al. Single-cell analysis by intracellular immuno-reaction and capillary electrophoresis with laser-induced fluorescence detection. , 2006, Journal of chromatography. A.
[111] R. Singer,et al. Localization of ASH1 mRNA particles in living yeast. , 1998, Molecular cell.
[112] Bronwyn G. Butcher,et al. Transcriptome Analysis of Pseudomonas syringae Identifies New Genes, Noncoding RNAs, and Antisense Activity , 2010, Journal of bacteriology.
[113] Antoni van Leeuwenhoek (1632–1723) and the discovery of bacteria , 2007, Antonie van Leeuwenhoek.
[114] Hsi-Ya Huang,et al. Analysis of carbonic anhydrase in human red Blood cells using capillary electrophoresis/ electrospray ionization-mass spectrometry. , 2002, Analytical chemistry.
[115] S. Yoshida,et al. Discrimination of live, anti-tuberculosis agent-injured, and dead Mycobacterium tuberculosis using flow cytometry. , 2009, FEMS microbiology letters.
[116] B. Rocha,et al. Quantification of multiple gene expression in individual cells. , 2004, Genome research.
[117] J. McGrath,et al. Single cell PCR amplification of microsatellites flanking the COL7A1 gene and suitability for preimplantation genetic diagnosis of Hallopeau-Siemens recessive dystrophic epidermolysis bullosa. , 2006, Journal of dermatological science.
[118] H. Yin,et al. Microfluidic chip for peptide analysis with an integrated HPLC column, sample enrichment column, and nanoelectrospray tip. , 2005, Analytical chemistry.
[119] Zhang Le,et al. Cell cycle-dependent protein fingerprint from a single cancer cell: image cytometry coupled with single-cell capillary sieving electrophoresis. , 2003, Analytical chemistry.
[120] J. Paulsson. Summing up the noise in gene networks , 2004, Nature.
[121] M. Rigoulet,et al. Tumor cell energy metabolism and its common features with yeast metabolism. , 2009, Biochimica et biophysica acta.
[122] Wilhelm T S Huck,et al. Simultaneous determination of gene expression and enzymatic activity in individual bacterial cells in microdroplet compartments. , 2009, Journal of the American Chemical Society.
[123] Catalin C. Barbacioru,et al. mRNA-Seq whole-transcriptome analysis of a single cell , 2009, Nature Methods.
[124] P. Philippsen,et al. Time-lapse video microscopy analysis reveals astral microtubule detachment in the yeast spindle pole mutant cnm67. , 2000, Molecular biology of the cell.
[125] M. Davidson,et al. Advances in fluorescent protein technology , 2011, Journal of Cell Science.
[126] M. Speicher,et al. Comparative genomic hybridization, loss of heterozygosity, and DNA sequence analysis of single cells. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[127] Mehmet Toner,et al. Single-cell chemical lysis in picoliter-scale closed volumes using a microfabricated device. , 2004, Analytical chemistry.
[128] Paul C H Li,et al. Transport, retention and fluorescent measurement of single biological cells studied in microfluidic chips. , 2004, Lab on a chip.
[129] Andreas Schmid,et al. Systems biology: Hypothesis-driven omics integration. , 2010, Nature chemical biology.
[130] K. Elenitoba-Johnson,et al. Validation of cDNA microarray gene expression data obtained from linearly amplified RNA , 2003, Molecular pathology : MP.
[131] Farren J. Isaacs,et al. Signal Processing in Single Cells , 2005, Science.
[132] Jonathan V Sweedler,et al. Spatial profiling with MALDI MS: distribution of neuropeptides within single neurons. , 2003, Analytical chemistry.
[133] Alexandra Ros,et al. Microfluidic single-cell analysis of intracellular compounds , 2008, Journal of The Royal Society Interface.
[134] George M. Church,et al. Genomes for all. , 2006, Scientific American.
[135] W. Jin,et al. Determination of different forms of human interferon‐γ in single natural killer cells by capillary electrophoresis with on‐capillary immunoreaction and laser‐induced fluorescence detection , 2004, Electrophoresis.
[136] Simona Panelli,et al. Towards the analysis of the genomes of single cells: further characterisation of the multiple displacement amplification. , 2006, Gene.
[137] Yidong Chen,et al. Amine-modified random primers to label probes for DNA microarrays. , 2002 .
[138] Deirdre R. Meldrum,et al. Life-on-a-chip , 2003, Nature Reviews Microbiology.
[139] Gideon Rechavi,et al. Amplification of multiple genomic loci from single cells isolated by laser micro-dissection of tissues , 2008, BMC biotechnology.
[140] J. Sweedler,et al. Quantitative Measurements of Cell−Cell Signaling Peptides with Single-Cell MALDI MS , 2008, Analytical chemistry.
[141] D. Melton,et al. Single-cell transcript analysis of pancreas development. , 2003, Developmental cell.
[142] J. Delhanty,et al. BIOPSY OF HUMAN PREIMPLANTATION EMBRYOS AND SEXING BY DNA AMPLIFICATION , 1989, The Lancet.
[143] R. Zenobi,et al. Interfacing Microfluidics and Laser Desorption/Ionization Mass Spectrometry by Continuous Deposition for Application in Single Cell Analysis , 2009 .
[144] J. Sweedler,et al. Capillary electrophoresis with electrospray ionization mass spectrometric detection for single-cell metabolomics. , 2009, Analytical chemistry.
[145] E. G. Ruestow. Images and ideas: Leeuwenhoek's perception of the spermatozoa , 1983, Journal of the history of biology.
[146] Nathalie Q Balaban,et al. Single-cell protein induction dynamics reveals a period of vulnerability to antibiotics in persister bacteria , 2008, Proceedings of the National Academy of Sciences.
[147] Nancy L Allbritton,et al. CRITICAL REVIEW www.rsc.org/loc | Lab on a Chip Analysis of single mammalian cells on-chip , 2006 .
[148] Jonathan V Sweedler,et al. Profiling signaling peptides in single mammalian cells using mass spectrometry. , 2006, Analytical chemistry.