Intestinal dysbiosis in inflammatory bowel disease associated with primary immunodeficiency.

[1]  J. Segre,et al.  Ectopic colonization of oral bacteria in the intestine drives TH1 cell induction and inflammation , 2017, Science.

[2]  Ramnik J. Xavier,et al.  Human genetic variation and the gut microbiome in disease , 2017, Nature Reviews Genetics.

[3]  H. Sokol,et al.  Fecal microbiota transplantation in inflammatory bowel disease: the quest for the holy grail , 2016, Mucosal Immunology.

[4]  J. Clemente,et al.  The microbiome in early life: implications for health outcomes , 2016, Nature Medicine.

[5]  R. Xavier,et al.  CARD9 impacts colitis by altering gut microbiota metabolism of tryptophan into aryl hydrocarbon receptor ligands , 2016, Nature Medicine.

[6]  T. Karlsen,et al.  The gut microbial profile in patients with primary sclerosing cholangitis is distinct from patients with ulcerative colitis without biliary disease and healthy controls , 2016, Gut.

[7]  Hugues Aschard,et al.  Fungal microbiota dysbiosis in IBD , 2016, Gut.

[8]  F. Rieux-Laucat,et al.  Immune deficiency-related enteropathy-lymphocytopenia-alopecia syndrome results from tetratricopeptide repeat domain 7A deficiency. , 2014, The Journal of allergy and clinical immunology.

[9]  H. Uhlig Monogenic diseases associated with intestinal inflammation: implications for the understanding of inflammatory bowel disease , 2013, Gut.

[10]  Timothy L. Tickle,et al.  Dysfunction of the intestinal microbiome in inflammatory bowel disease and treatment , 2012, Genome Biology.

[11]  Eric P. Nawrocki,et al.  An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea , 2011, The ISME Journal.

[12]  William A. Walters,et al.  QIIME allows analysis of high-throughput community sequencing data , 2010, Nature Methods.

[13]  José Luis Balcázar,et al.  Lactococcus garvieae in fish: a review. , 2006, Comparative immunology, microbiology and infectious diseases.

[14]  Robert C. Edgar,et al.  Search and clustering orders of magnitude faster than BLAST , 2010 .