Seizure control through genetic and pharmacological manipulation of Pumilio in Drosophila: a key component of neuronal homeostasis

ABSTRACT Epilepsy is a significant disorder for which approximately one-third of patients do not respond to drug treatments. Next-generation drugs, which interact with novel targets, are required to provide a better clinical outcome for these individuals. To identify potential novel targets for antiepileptic drug (AED) design, we used RNA sequencing to identify changes in gene transcription in two seizure models of the fruit fly Drosophila melanogaster. The first model compared gene transcription between wild type (WT) and bangsenseless1 (parabss), a gain-of-function mutant in the sole fly voltage-gated sodium channel (paralytic). The second model compared WT with WT fed the proconvulsant picrotoxin (PTX). We identified 743 genes (FDR≤1%) with significant altered expression levels that are common to both seizure models. Of these, 339 are consistently upregulated and 397 downregulated. We identify pumilio (pum) to be downregulated in both seizure models. Pum is a known homeostatic regulator of action potential firing in both flies and mammals, achieving control of neuronal firing through binding to, and regulating translation of, the mRNA transcripts of voltage-gated sodium channels (Nav). We show that maintaining expression of pum in the CNS of parabss flies is potently anticonvulsive, whereas its reduction through RNAi-mediated knockdown is proconvulsive. Using a cell-based luciferase reporter screen, we screened a repurposed chemical library and identified 12 compounds sufficient to increase activity of pum. Of these compounds, we focus on avobenzone, which significantly rescues seizure behaviour in parabss flies. The mode of action of avobenzone includes potentiation of pum expression and mirrors the ability of this homeostatic regulator to reduce the persistent voltage-gated Na+ current (INaP) in an identified neuron. This study reports a novel approach to suppress seizure and highlights the mechanisms of neuronal homeostasis as potential targets for next-generation AEDs. Summary: Next-generation anticonvulsant compounds potentiate the activity of the neuronal homeostatic regulator Pumilio.

[1]  W. Catterall Sodium Channel Mutations and Epilepsy , 2012 .

[2]  I. Raman,et al.  Open-Channel Block by the Cytoplasmic Tail of Sodium Channel β4 as a Mechanism for Resurgent Sodium Current , 2005, Neuron.

[3]  R. Baines,et al.  Seizure suppression through manipulating splicing of a voltage-gated sodium channel , 2015, Brain : a journal of neurology.

[4]  R. Verheijen DNA topoisomerase I , 1996 .

[5]  Brad T. Sherman,et al.  Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists , 2008, Nucleic acids research.

[6]  Steven W. Flavell,et al.  Mef2-mediated transcription of the miR379–410 cluster regulates activity-dependent dendritogenesis by fine-tuning Pumilio2 protein levels , 2009, The EMBO journal.

[7]  W. Löscher,et al.  Phenytoin potently increases the threshold for focal seizures in amygdala-kindled rats , 1990, Neuropharmacology.

[8]  Mark D. Robinson,et al.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data , 2009, Bioinform..

[9]  Ke Dong,et al.  Drosophila as a Model for Epilepsy: bss Is a Gain-of-Function Mutation in the Para Sodium Channel Gene That Leads to Seizures , 2011, Genetics.

[10]  T. Kitamoto,et al.  Drosophila cholinergic neurons and processes visualized with Gal4/UAS-GFP. , 2001, Brain research. Gene expression patterns.

[11]  R. Reenan,et al.  The mlenapts RNA Helicase Mutation in Drosophila Results in a Splicing Catastrophe of the para Na+ Channel Transcript in a Region of RNA Editing , 2000, Neuron.

[12]  Brad T. Sherman,et al.  Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources , 2008, Nature Protocols.

[13]  R. Wharton,et al.  The Pumilio RNA-binding domain is also a translational regulator. , 1998, Molecular cell.

[14]  T. Nabeshima,et al.  Anticonvulsant actions of nefiracetam on epileptic EL mice and their relation to peripheral-type benzodiazepine receptors , 2000, Brain Research.

[15]  H. Driscoll,et al.  Pumilio-2 Regulates Translation of Nav1.6 to Mediate Homeostasis of Membrane Excitability , 2013, The Journal of Neuroscience.

[16]  Cengiz Günay,et al.  Activity-Dependent Alternative Splicing Increases Persistent Sodium Current and Promotes Seizure , 2012, The Journal of Neuroscience.

[17]  P. Salvaterra,et al.  Localization of choline acetyltransferase‐expressing neurons in Drosophila nervous system , 1999, Microscopy research and technique.

[18]  A. Aggarwal,et al.  Co-occupancy of two Pumilio molecules on a single hunchback NRE. , 2009, RNA.

[19]  M. Tanouye,et al.  The Drosophila slamdance gene: a mutation in an aminopeptidase can cause seizure, paralysis and neuronal failure. , 2002, Genetics.

[20]  M. Kiebler,et al.  Mammalian Pumilio 2 regulates dendrite morphogenesis and synaptic function , 2010, Proceedings of the National Academy of Sciences.

[21]  B. Ganetzky,et al.  Indirect Suppression Involving Behavioral Mutants with Altered Nerve Excitability in DROSOPHILA MELANOGASTER. , 1982, Genetics.

[22]  A. Constanti,et al.  mTOR inhibition modulates epileptogenesis, seizures and depressive behavior in a genetic rat model of absence epilepsy , 2013, Neuropharmacology.

[23]  M. Meisler,et al.  Sodium channel mutations in epilepsy and other neurological disorders. , 2005, The Journal of clinical investigation.

[24]  G. Davis Homeostatic Signaling and the Stabilization of Neural Function , 2013, Neuron.

[25]  Kevin G. Moffat,et al.  Article Title: Regulation of Neuronal Excitability through Pumilio- Dependent Control of a Sodium Channel Gene Regulation of Neuronal Excitability through Pumilio- Dependent Control of a Sodium Channel Gene Materials and Methods , 2022 .

[26]  M. Wood,et al.  Brivaracetam: Rationale for discovery and preclinical profile of a selective SV2A ligand for epilepsy treatment , 2016, Epilepsia.

[27]  M. Tanouye,et al.  The mei-P26 Gene Encodes a RING Finger B-box Coiled-Coil-NHL Protein That Regulates Seizure Susceptibility in Drosophilia , 2005, Genetics.

[28]  J. Noebels Pathway-driven discovery of epilepsy genes , 2015, Nature Neuroscience.

[29]  R. Baines,et al.  Translational regulation of neuronal electrical properties , 2007, Invertebrate Neuroscience.

[30]  R. Baines,et al.  Neuronal homeostasis through translational control , 2005, Molecular Neurobiology.

[31]  R. Baines,et al.  Pumilio Binds para mRNA and Requires Nanos and Brat to Regulate Sodium Current in Drosophila Motoneurons , 2008, The Journal of Neuroscience.

[32]  Hao Huang,et al.  Reduced Pumilio-2 expression in patients with temporal lobe epilepsy and in the lithium–pilocarpine induced epilepsy rat model , 2015, Epilepsy & Behavior.

[33]  Daniel Herschlag,et al.  Genome-wide identification of mRNAs associated with the translational regulator PUMILIO in Drosophila melanogaster. , 2006, Proceedings of the National Academy of Sciences of the United States of America.

[34]  Juan Song,et al.  From bench to drug: Human seizure modeling using Drosophila , 2008, Progress in Neurobiology.

[35]  M. Tanouye,et al.  DNA topoisomerase I inhibitors ameliorate seizure-like behaviors and paralysis in a Drosophila model of epilepsy , 2008, Neuroscience.

[36]  Drosophila melanogaster in the study of epilepsy. , 2008, SEB experimental biology series.

[37]  Richard Marley,et al.  Increased persistent Na+ current contributes to seizure in the slamdance bang-sensitive Drosophila mutant. , 2011, Journal of neurophysiology.

[38]  C. Stafstrom Persistent Sodium Current and Its Role in Epilepsy , 2007, Epilepsy currents.

[39]  D. Callaghan,et al.  Pharmacological modification of amygdaloid-kindled seizures , 1980, Neuropharmacology.

[40]  M. Tanouye,et al.  The Drosophila easily shocked gene: A mutation in a phospholipid synthetic pathway causes seizure, neuronal failure, and paralysis , 1994, Cell.

[41]  H. Heller,et al.  Pumilio-2 Function in the Mouse Nervous System , 2011, PloS one.

[42]  M. Stern,et al.  The Drosophila melanogaster translational repressor pumilio regulates neuronal excitability. , 2002, Genetics.

[43]  S. Danzer,et al.  Mechanisms regulating neuronal excitability and seizure development following mTOR pathway hyperactivation , 2014, Front. Mol. Neurosci..

[44]  Andrew Escayg,et al.  Sodium channel SCN1A and epilepsy: Mutations and mechanisms , 2010, Epilepsia.

[45]  G. Turrigiano Homeostatic synaptic plasticity: local and global mechanisms for stabilizing neuronal function. , 2012, Cold Spring Harbor perspectives in biology.