Perspectives on model forecasts of the 2014–2015 Ebola epidemic in West Africa: lessons and the way forward

The unprecedented impact and modeling efforts associated with the 2014–2015 Ebola epidemic in West Africa provides a unique opportunity to document the performances and caveats of forecasting approaches used in near-real time for generating evidence and to guide policy. A number of international academic groups have developed and parameterized mathematical models of disease spread to forecast the trajectory of the outbreak. These modeling efforts often relied on limited epidemiological data to derive key transmission and severity parameters, which are needed to calibrate mechanistic models. Here, we provide a perspective on some of the challenges and lessons drawn from these efforts, focusing on (1) data availability and accuracy of early forecasts; (2) the ability of different models to capture the profile of early growth dynamics in local outbreaks and the importance of reactive behavior changes and case clustering; (3) challenges in forecasting the long-term epidemic impact very early in the outbreak; and (4) ways to move forward. We conclude that rapid availability of aggregated population-level data and detailed information on a subset of transmission chains is crucial to characterize transmission patterns, while ensemble-forecasting approaches could limit the uncertainty of any individual model. We believe that coordinated forecasting efforts, combined with rapid dissemination of disease predictions and underlying epidemiological data in shared online platforms, will be critical in optimizing the response to current and future infectious disease emergencies.

[1]  C. Viboud,et al.  Characterizing the reproduction number of epidemics with early subexponential growth dynamics , 2016, Journal of The Royal Society Interface.

[2]  J. Medlock,et al.  Strategies for containing Ebola in West Africa , 2014, Science.

[3]  Stefano Merler,et al.  The 2014 Ebola virus disease outbreak in Pujehun, Sierra Leone: epidemiology and impact of interventions , 2015, BMC Medicine.

[4]  M. Pagano,et al.  Transmissibility of the Influenza Virus in the 1918 Pandemic , 2008, PloS one.

[5]  Gerardo Chowell,et al.  The Effective Reproduction Number as a Prelude to Statistical Estimation of Time-Dependent Epidemic Trends , 2009, Mathematical and Statistical Estimation Approaches in Epidemiology.

[6]  Mosoka P. Fallah,et al.  Exposure Patterns Driving Ebola Transmission in West Africa: A Retrospective Observational Study , 2016, PLoS medicine.

[7]  W. Team Ebola Virus Disease in West Africa — The First 9 Months of the Epidemic and Forward Projections , 2014 .

[8]  G. Chowell,et al.  Authors’ reply: Feedback from modelling to surveillance of Ebola virus disease , 2014 .

[9]  Christopher Dye,et al.  Ebola virus disease in the Democratic Republic of Congo. , 2014, The New England journal of medicine.

[10]  Dylan B. George,et al.  Mathematical modeling of the West Africa Ebola epidemic , 2015, eLife.

[11]  Further Particulars,et al.  London School of Hygiene & Tropical Medicine , 2007 .

[12]  G. F. Webb,et al.  A model of the Ebola epidemics in West Africa incorporating age of infection , 2015, Journal of biological dynamics.

[13]  M. Lipsitch,et al.  How generation intervals shape the relationship between growth rates and reproductive numbers , 2007, Proceedings of the Royal Society B: Biological Sciences.

[14]  Peter Schuster,et al.  Ebola—challenge and revival of theoretical epidemiology: Why Extrapolations from early phases of epidemics are problematic , 2015, Complex..

[15]  Joel G. Breman,et al.  The epidemiology of Ebola haemorrhagic fever in Zaire 1976. , 1978 .

[16]  C. Rivers,et al.  Make Data Sharing Routine to Prepare for Public Health Emergencies , 2016, PLoS medicine.

[17]  Wolfgang Schramm,et al.  Team , 2018, Spaces of Intensity.

[18]  C Viboud,et al.  Transmission dynamics and control of Ebola virus disease outbreak in Nigeria, July to September 2014. , 2014, Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin.

[19]  Ebola: the power of behaviour change. , 2014, Nature.

[20]  C. Viboud,et al.  Mathematical models to characterize early epidemic growth: A review. , 2016, Physics of life reviews.

[21]  C. Althaus Estimating the Reproduction Number of Ebola Virus (EBOV) During the 2014 Outbreak in West Africa , 2014, PLoS currents.

[22]  A. Sanchez,et al.  The reemergence of Ebola hemorrhagic fever, Democratic Republic of the Congo, 1995. Commission de Lutte contre les Epidémies à Kikwit. , 1999, The Journal of infectious diseases.

[23]  Alessandro Vespignani,et al.  Assessing the International Spreading Risk Associated with the 2014 West African Ebola Outbreak , 2014, PLoS currents.

[24]  Simon Cauchemez,et al.  Chains of transmission and control of Ebola virus disease in Conakry, Guinea, in 2014: an observational study. , 2015, The Lancet. Infectious diseases.

[25]  M. Meltzer,et al.  Estimating the future number of cases in the Ebola epidemic--Liberia and Sierra Leone, 2014-2015. , 2014, MMWR supplements.

[26]  Roy M. Anderson,et al.  Transmission dynamics of HIV infection , 1987, Nature.

[27]  P. Piot,et al.  Containing Ebola virus infection in West Africa. , 2014, Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin.

[28]  E. Jung,et al.  Transmission characteristics of MERS and SARS in the healthcare setting: a comparative study , 2015, BMC Medicine.

[29]  G. Chowell,et al.  Early transmission dynamics of Ebola virus disease (EVD), West Africa, March to August 2014. , 2014, Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin.

[30]  D. Fisman,et al.  Early Epidemic Dynamics of the West African 2014 Ebola Outbreak: Estimates Derived with a Simple Two-Parameter Model , 2014, PLoS currents.

[31]  Gábor Csányi,et al.  Polynomial epidemics and clustering in contact networks , 2004, Proceedings of the Royal Society of London. Series B: Biological Sciences.

[32]  K. Lindblade,et al.  Community Quarantine to Interrupt Ebola Virus Transmission — Mawah Village, Bong County, Liberia, August–October, 2014 , 2015, MMWR. Morbidity and mortality weekly report.

[33]  Oliver Morgan,et al.  Ebola Surveillance - Guinea, Liberia, and Sierra Leone. , 2016, MMWR supplements.

[34]  Gerardo Chowell,et al.  Characterizing Ebola Transmission Patterns Based on Internet News Reports. , 2016, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

[35]  Chao Liu,et al.  Transmission network of the 2014–2015 Ebola epidemic in Sierra Leone , 2015, Journal of The Royal Society Interface.

[36]  A. J. Hall Infectious diseases of humans: R. M. Anderson & R. M. May. Oxford etc.: Oxford University Press, 1991. viii + 757 pp. Price £50. ISBN 0-19-854599-1 , 1992 .

[37]  Mikiko Senga,et al.  Ebola virus disease in West Africa--the first 9 months of the epidemic and forward projections. , 2014, The New England journal of medicine.

[38]  O. Tomori,et al.  Will Africa’s future epidemic ride on forgotten lessons from the Ebola epidemic? , 2015, BMC Medicine.

[39]  Gerardo Chowell,et al.  Assessing the impact of public health interventions on the transmission of pandemic H1N1 influenza a virus aboard a Peruvian navy ship , 2014, Influenza and other respiratory viruses.

[40]  Alessandro Vespignani,et al.  Spatiotemporal spread of the 2014 outbreak of Ebola virus disease in Liberia and the effectiveness of non-pharmaceutical interventions: a computational modelling analysis. , 2015, Lancet. Infectious Diseases (Print).

[41]  R. Rothenberg A Reality of Its Own , 2016 .

[42]  W. Edmunds,et al.  Analyses of the 1957 (Asian) influenza pandemic in the United Kingdom and the impact of school closures , 2007, Epidemiology and Infection.

[43]  Fred Brauer,et al.  Some simple epidemic models. , 2005, Mathematical biosciences and engineering : MBE.

[44]  J M Hyman,et al.  Risk behavior-based model of the cubic growth of acquired immunodeficiency syndrome in the United States. , 1989, Proceedings of the National Academy of Sciences of the United States of America.

[45]  C. Viboud,et al.  Using Phenomenological Models to Characterize Transmissibility and Forecast Patterns and Final Burden of Zika Epidemics , 2016, PLoS currents.

[46]  Gerardo Chowell,et al.  The Western Africa Ebola Virus Disease Epidemic Exhibits Both Global Exponential and Local Polynomial Growth Rates , 2014, PLoS currents.

[47]  F. Kaducu,et al.  Outbreak of Ebola hemorrhagic fever Uganda, August 2000-January 2001. , 2001, MMWR. Morbidity and mortality weekly report.

[48]  C. Viboud,et al.  A generalized-growth model to characterize the early ascending phase of infectious disease outbreaks , 2015, Epidemics.

[49]  J. Hyman,et al.  Mathematical and Statistical Modeling for Emerging and Re-emerging Infectious Diseases , 2016 .

[50]  Robert J. Smith,et al.  A mathematical model of ebola virus disease: using sensitivity analysis to determine effective intervention targets , 2016, SummerSim.

[51]  Alessandro Vespignani,et al.  influenza A(H1N1): a Monte Carlo likelihood analysis based on , 2009 .