RECURRENT AND RECENT SELECTIVE SWEEPS IN THE piRNA PATHWAY
暂无分享,去创建一个
A. Wong | J. Jensen | Y. Poh | W. Theurkauf | Alfred Simkin
[1] Zhiping Weng,et al. Adaptation to P Element Transposon Invasion in Drosophila melanogaster , 2011, Cell.
[2] J. Mell,et al. Molecular evolution under increasing transposable element burden in Drosophila: A speed limit on the evolutionary arms race , 2011, BMC Evolutionary Biology.
[3] E. Zelentsova,et al. Expression of Drosophila virilis Retroelements and Role of Small RNAs in Their Intrastrain Transposition , 2011, PloS one.
[4] Bryan D. Kolaczkowski,et al. Recurrent adaptation in RNA interference genes across the Drosophila phylogeny. , 2011, Molecular biology and evolution.
[5] F. Jiggins,et al. Recent and Recurrent Selective Sweeps of the Antiviral RNAi Gene Argonaute-2 in Three Species of Drosophila , 2010, Molecular biology and evolution.
[6] Ziheng Yang,et al. The effect of insertions, deletions, and alignment errors on the branch-site test of positive selection. , 2010, Molecular biology and evolution.
[7] Anna-Sophie Fiston-Lavier,et al. Drosophila melanogaster recombination rate calculator. , 2010, Gene.
[8] R. Sachidanandam,et al. Small RNA-based silencing strategies for transposons in the process of invading Drosophila species. , 2010, RNA.
[9] M. Siomi,et al. How does the royal family of Tudor rule the PIWI-interacting RNA pathway? , 2010, Genes & development.
[10] E. P. Lei,et al. HP1 Recruitment in the Absence of Argonaute Proteins in Drosophila , 2010, PLoS genetics.
[11] A. Domínguez,et al. Genomic distribution of retrotransposons 297, 1731, copia, mdg1 and roo in the Drosophila melanogaster species subgroup , 2010, Genetica.
[12] Z. Weng,et al. The Drosophila HP1 Homolog Rhino Is Required for Transposon Silencing and piRNA Production by Dual-Strand Clusters , 2009, Cell.
[13] Pablo Librado,et al. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data , 2009, Bioinform..
[14] Z. Weng,et al. Collapse of Germline piRNAs in the Absence of Argonaute3 Reveals Somatic piRNAs in Flies , 2009, Cell.
[15] Julius Brennecke,et al. Specialized piRNA Pathways Act in Germline and Somatic Tissues of the Drosophila Ovary , 2009, Cell.
[16] David Osumi-Sutherland,et al. FlyBase: enhancing Drosophila Gene Ontology annotations , 2008, Nucleic Acids Res..
[17] R. Nielsen,et al. Synonymous and nonsynonymous rate variation in nuclear genes of mammals , 1998, Journal of Molecular Evolution.
[18] S. Elgin,et al. Small RNA-directed heterochromatin formation in the context of development: what flies might learn from fission yeast. , 2009, Biochimica et biophysica acta.
[19] F. Jiggins,et al. The evolution of RNAi as a defence against viruses and transposable elements , 2008, Philosophical Transactions of the Royal Society B: Biological Sciences.
[20] Melanie A. Huntley,et al. Evolution of genes and genomes on the Drosophila phylogeny , 2007, Nature.
[21] Colin N. Dewey,et al. Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures , 2007, Nature.
[22] Seth D Findley,et al. Drosophila PIWI associates with chromatin and interacts directly with HP1a. , 2007, Genes & development.
[23] Ziheng Yang. PAML 4: phylogenetic analysis by maximum likelihood. , 2007, Molecular biology and evolution.
[24] T. Schüpbach,et al. zucchini and squash encode two putative nucleases required for rasiRNA production in the Drosophila germline. , 2007, Developmental cell.
[25] T. Kai,et al. Unique germ-line organelle, nuage, functions to repress selfish genetic elements in Drosophila melanogaster , 2007, Proceedings of the National Academy of Sciences.
[26] Manolis Kellis,et al. Discrete Small RNA-Generating Loci as Master Regulators of Transposon Activity in Drosophila , 2007, Cell.
[27] Kuniaki Saito,et al. A Slicer-Mediated Mechanism for Repeat-Associated siRNA 5' End Formation in Drosophila , 2007, Science.
[28] Vladimir Gvozdev,et al. A Distinct Small RNA Pathway Silences Selfish Genetic Elements in the Germline , 2006, Science.
[29] Hsiao-Pei Yang,et al. Genomewide Comparative Analysis of the Highly Abundant Transposable Element DINE-1 Suggests a Recent Transpositional Burst in Drosophila yakuba , 2006, Genetics.
[30] D. Halligan,et al. Natural Selection Drives Extremely Rapid Evolution in Antiviral RNAi Genes , 2006, Current Biology.
[31] R. Nielsen,et al. Evaluation of an improved branch-site likelihood method for detecting positive selection at the molecular level. , 2005, Molecular biology and evolution.
[32] Carlos Bustamante,et al. Genomic scans for selective sweeps using SNP data. , 2005, Genome research.
[33] Ari Löytynoja,et al. An algorithm for progressive multiple alignment of sequences with insertions. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[34] C. Bustamante,et al. Distinguishing Between Selective Sweeps and Demography Using DNA Polymorphism Data , 2005, Genetics.
[35] S. Henikoff,et al. Positive Selection Drives the Evolution of rhino, a Member of the Heterochromatin Protein 1 Family in Drosophila , 2005, PLoS genetics.
[36] P. Capy,et al. The First Steps of Transposable Elements Invasion , 2005, Genetics.
[37] A. Wong,et al. Evolutionary Expressed Sequence Tag Analysis of Drosophila Female Reproductive Tracts Identifies Genes Subjected to Positive Selection , 2004, Genetics.
[38] Nick Goldman,et al. Accuracy and Power of Statistical Methods for Detecting Adaptive Evolution in Protein Coding Sequences and for Identifying Positively Selected Sites , 2004, Genetics.
[39] H. Kazazian. Mobile Elements: Drivers of Genome Evolution , 2004, Science.
[40] James A. Birchler,et al. Heterochromatic Silencing and HP1 Localization in Drosophila Are Dependent on the RNAi Machinery , 2004, Science.
[41] Molly Przeworski,et al. The signature of positive selection at randomly chosen loci. , 2002, Genetics.
[42] W. Stephan,et al. Detecting a local signature of genetic hitchhiking along a recombining chromosome. , 2002, Genetics.
[43] J. Birchler,et al. RNAi related mechanisms affect both transcriptional and posttranscriptional transgene silencing in Drosophila. , 2002, Molecular cell.
[44] Justin C. Fay,et al. Hitchhiking under positive Darwinian selection. , 2000, Genetics.
[45] M. Kreitman,et al. Adaptive protein evolution at the Adh locus in Drosophila , 1991, Nature.
[46] M. G. Kidwell,et al. Evidence for horizontal transmission of the P transposable element between Drosophila species. , 1990, Genetics.
[47] D. Anxolabéhère,et al. Molecular characteristics of diverse populations are consistent with the hypothesis of a recent invasion of Drosophila melanogaster by mobile P elements. , 1988, Molecular biology and evolution.
[48] M. Nei,et al. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. , 1986, Molecular biology and evolution.