Timely and spatially regulated maturation of B and T cell repertoire during human fetal development

Immunocompetence in the developing fetus is temporally and spatially regulated. Developing Immunity The adaptive immune response plays a critical role in protecting the body from both foreign pathogens and internal dangers such as cancer. However, little is known about how the immune system develops during human gestation. Rechavi et al. analyzed differences in B and T lymphocyte ontogeny from 12 to 26 weeks of gestational age. They found that B cell development precedes T cell development and that repertoire maturation is both temporally and spatially regulated. These data can be used as a baseline to improve immune function in developing fetuses and to assess the effects of therapeutic interventions. Insights into the ontogeny of the human fetal adaptive immune system are of great value for understanding immunocompetence of the developing fetus. However, to date, this has remained largely uncharted territory, in large part because blood samples from healthy, early gestation fetuses have been hard to come by. In a comprehensive study, we analyzed levels of T cell receptor excision circles (TRECs), signal-joint κ receptor excision circles (sjKRECs), and intron recombination signal sequence–K-deleting element (iRSS-Kde) rearrangement, and T and B lymphocyte repertoire clonality in human fetuses from 12 to 26 weeks of gestational age. Using next-generation sequencing, we analyzed the diversity and complexity of T cell receptor β (TRB) and immunoglobulin heavy chain (IGH) repertoires in four fetuses at 12, 13, 22, and 26 weeks of gestation and in healthy full-term infants. We report the progressive increase of TREC, sjKREC, and iRSS-Kde levels over time and confirm that B cell development precedes T cell development in the human fetus. Temporally and spatially regulated maturation of B and T cell repertoire diversity and complexity during human fetal development was observed, including evidence that immunoglobulin somatic hypermutation and class switch recombination occur already during intrauterine life. Our results help define physiological levels of immunodeficiency in premature infants and may serve as a reference for future studies aimed at investigating the impact of intrauterine pathologies on fetal immune development and function.

[1]  Thierry Mora,et al.  The Past, Present, and Future of Immune Repertoire Biology – The Rise of Next-Generation Repertoire Analysis , 2013, Front. Immunol..

[2]  H. Robins Immunosequencing: applications of immune repertoire deep sequencing. , 2013, Current opinion in immunology.

[3]  Yan Wang,et al.  The Shape of the Lymphocyte Receptor Repertoire: Lessons from the B Cell Receptor , 2013, Front. Immunol..

[4]  Patrice Duroux,et al.  IMGT/HighV QUEST paradigm for T cell receptor IMGT clonotype diversity and next generation repertoire immunoprofiling , 2013, Nature Communications.

[5]  N. Amariglio,et al.  Thymic function in MHC class II-deficient patients. , 2013, The Journal of allergy and clinical immunology.

[6]  J. O’Neill,et al.  V(D)J Recombinase-Mediated TCR β Locus Gene Usage and Coding Joint Processing in Peripheral T Cells during Perinatal and Pediatric Development , 2012, The Journal of Immunology.

[7]  G. Ippolito,et al.  Immunoglobulin Analysis Tool: A Novel Tool for the Analysis of Human and Mouse Heavy and Light Chain Transcripts , 2012, Front. Immun..

[8]  D. Dimitrov,et al.  Expressed antibody repertoires in human cord blood cells: 454 sequencing and IMGT/HighV-QUEST analysis of germline gene usage, junctional diversity, and somatic mutations , 2012, Immunogenetics.

[9]  N. Amariglio,et al.  The Kinetics of Early T and B Cell Immune Recovery after Bone Marrow Transplantation in RAG-2-Deficient SCID Patients , 2012, PloS one.

[10]  Daniel C. Douek,et al.  A Mechanism for TCR Sharing between T Cell Subsets and Individuals Revealed by Pyrosequencing , 2011, The Journal of Immunology.

[11]  O. Ramilo,et al.  Challenges in infant immunity: implications for responses to infection and vaccines , 2011, Nature Immunology.

[12]  R. Schelonka,et al.  DH and JH usage in murine fetal liver mirrors that of human fetal liver , 2010, Immunogenetics.

[13]  Baback Gharizadeh,et al.  High throughput sequencing reveals a complex pattern of dynamic interrelationships among human T cell subsets , 2010, Proceedings of the National Academy of Sciences.

[14]  D. Price,et al.  TCR β-Chain Sharing in Human CD8+ T Cell Responses to Cytomegalovirus and EBV1 , 2008, The Journal of Immunology.

[15]  H. Spits,et al.  T cell–independent development and induction of somatic hypermutation in human IgM+IgD+CD27+ B cells , 2008, The Journal of experimental medicine.

[16]  N. Greenspan,et al.  Decreased expression of tumor necrosis factor family receptors involved in humoral immune responses in preterm neonates. , 2007, Blood.

[17]  S. Akira,et al.  Class switch recombination and somatic hypermutation in early mouse B cells are mediated by B cell and Toll-like receptors. , 2007, Immunity.

[18]  M. van der Burg,et al.  Replication history of B lymphocytes reveals homeostatic proliferation and extensive antigen-induced B cell expansion , 2007, The Journal of experimental medicine.

[19]  C. Berek,et al.  The Postnatal Maturation of the Immunoglobulin Heavy Chain IgG Repertoire in Human Preterm Neonates Is Slower than in Term Neonates1 , 2007, The Journal of Immunology.

[20]  Daniel C. Douek,et al.  Sharing of T cell receptors in antigen-specific responses is driven by convergent recombination , 2006, Proceedings of the National Academy of Sciences.

[21]  M. Nussenzweig,et al.  A checkpoint for autoreactivity in human IgM+ memory B cell development , 2006, The Journal of experimental medicine.

[22]  P. Lipsky,et al.  Chain Cdr3 Developmental Changes in the Human Heavy , 2013 .

[23]  Dick de Ridder,et al.  New insights on human T cell development by quantitative T cell receptor gene rearrangement studies and gene expression profiling , 2005, The Journal of experimental medicine.

[24]  T. Imanishi‐Kari,et al.  T cell-independent somatic hypermutation in murine B cells with an immature phenotype. , 2004, Immunity.

[25]  M Hummel,et al.  Design and standardization of PCR primers and protocols for detection of clonal immunoglobulin and T-cell receptor gene recombinations in suspect lymphoproliferations: Report of the BIOMED-2 Concerted Action BMH4-CT98-3936 , 2003, Leukemia.

[26]  H. Schroeder,et al.  Slow, programmed maturation of the immunoglobulin HCDR3 repertoire during the third trimester of fetal life. , 2001, Blood.

[27]  B. Björkstén,et al.  Detection of Fel d 1–immunoglobulin G immune complexes in cord blood and sera from allergic and non‐allergic mothers , 2001, Pediatric allergy and immunology : official publication of the European Society of Pediatric Allergy and Immunology.

[28]  H. Versmold,et al.  The diversity of rearranged immunoglobulin heavy chain variable region genes in peripheral blood B cells of preterm infants is restricted by short third complementarity-determining regions but not by limited gene segment usage. , 2001, Blood.

[29]  M. Petrovecki,et al.  Two-color flow cytometric analysis of preterm and term newborn lymphocytes. , 2000, Immunobiology.

[30]  Z. Szépfalusi,et al.  Transplacental priming of the human immune system with environmental allergens can occur early in gestation. , 2000, The Journal of allergy and clinical immunology.

[31]  P. Holt,et al.  The development of the immune system during pregnancy and early life , 2000, Allergy.

[32]  J. Xu,et al.  Diversity in the CDR3 region of V(H) is sufficient for most antibody specificities. , 2000, Immunity.

[33]  R. Sékaly,et al.  Detection of T cell receptor circles (TRECs) as biomarkers for de novo T cell synthesis using a quantitative polymerase chain reaction-enzyme linked immunosorbent assay (PCR-ELISA). , 2000, Journal of immunological methods.

[34]  A. Smolyar,et al.  The crystal structure of a T cell receptor in complex with peptide and MHC class II. , 1999, Science.

[35]  G. Ippolito,et al.  Regulation of the antibody repertoire through control of HCDR3 diversity. , 1998, Vaccine.

[36]  Baskin,et al.  Characterization of the CDR3 region of rearranged α heavy chain genes in human fetal liver , 1998 .

[37]  R. Schelonka,et al.  T Cell Receptor Repertoire Diversity and Clonal Expansion in Human Neonates , 1998, Pediatric Research.

[38]  H. Zola,et al.  Somatic hypermutation of immunoglobulin genes in human neonates , 1997, Clinical and experimental immunology.

[39]  L. Notarangelo,et al.  Ineffective expression of CD40 ligand on cord blood T cells may contribute to poor immunoglobulin production in the newborn , 1994, European journal of immunology.

[40]  R. Krijger,et al.  Usage of TCRAV and TCRBV gene families in human fetal and adult TCR rearrangements , 1994, Immunogenetics.

[41]  V. Pascual,et al.  Analysis of Ig H chain gene segment utilization in human fetal liver. Revisiting the "proximal utilization hypothesis". , 1993, Journal of immunology.

[42]  K. Nicolaides,et al.  Blood leucocyte count in the human fetus. , 1992, Archives of disease in childhood.

[43]  J. George,et al.  Developmental regulation of D beta reading frame and junctional diversity in T cell receptor-beta transcripts from human thymus. , 1992, Journal of immunology.

[44]  R. Schuurman,et al.  Restricted utilization of germ‐line VH3 genes and short diverse third complementarity‐determining regions (CDR3) in human fetal B lymphocyte immunoglobulin heavy chain rearrangements , 1992, European journal of immunology.

[45]  J. Y. Wang,et al.  Preferential utilization of conserved immunoglobulin heavy chain variable gene segments during human fetal life. , 1990, Proceedings of the National Academy of Sciences of the United States of America.

[46]  R. Perlmutter,et al.  Early restriction of the human antibody repertoire. , 1987, Science.

[47]  R. Benner,et al.  Early development of Ig-secreting cells in young of germ-free BALB/c mice fed a chemically defined ultrafiltered diet. , 1987, Cellular immunology.

[48]  G. Cassady,et al.  A correlative immunologic, microbiologic and clinical approach to the diagnosis of acute and chronic infections in newborn infants. , 1967, The New England journal of medicine.

[49]  D. Douek,et al.  TCR beta-chain sharing in human CD8+ T cell responses to cytomegalovirus and EBV. , 2008, Journal of immunology.

[50]  C. Woo,et al.  The generation of antibody diversity through somatic hypermutation and class switch recombination. , 2004, Genes & development.

[51]  R. Schelonka,et al.  Regulation and chance in the ontogeny of B and T cell antigen receptor repertoires , 2002, Immunologic research.

[52]  O Hammer-Muntz,et al.  PAST: paleontological statistics software package for education and data analysis version 2.09 , 2001 .

[53]  Ø. Hammer,et al.  PAST: PALEONTOLOGICAL STATISTICAL SOFTWARE PACKAGE FOR EDUCATION AND DATA ANALYSIS , 2001 .

[54]  W. Bossert,et al.  The Measurement of Diversity , 2001 .

[55]  H. Ochs,et al.  Diminished expression of CD40 ligand by activated neonatal T cells. , 1995, The Journal of clinical investigation.

[56]  E. Kaijzel,et al.  Non-random employment of Vβ6 and Jβ gene elements and conserved amino acid usage profiles in CDR3 regions of human fetal and adult TCR β chain rearrangements , 1994 .

[57]  K. Nicolaides,et al.  Fetal B lymphocyte subpopulations in normal pregnancies. , 1992, Fetal diagnosis and therapy.

[58]  K. Nicolaides,et al.  Fetal T-lymphocyte subpopulations in normal pregnancies. , 1992, Fetal diagnosis and therapy.