Metadata and Semantics Research

This paper presents research examining metadata capital in the context of the Viral Vector Core Laboratory at the National Institute of Environmental Health Sciences (NIEHS). Methods include collaborative workflow modeling and a metadata analysis. Models of the laboratory’s workflow and metadata activity are generated to identify potential opportunities for defining microservices that may be supported by iRODS rules. Generic iRODS rules are also shared along with images of the iRODS prototype. The discussion includes an exploration of a modified capital sigma equation to understand metadata as an asset. The work aims to raise awareness of metadata as an asset and to incentivize investment in metadata R&D.

[1]  Kai-Uwe Kühnberger,et al.  Mining Concept Similarities for Heterogeneous Ontologies , 2010, ICDM.

[2]  N. Leidy,et al.  Incorporating the patient's perspective into drug development and communication: an ad hoc task force report of the Patient-Reported Outcomes (PRO) Harmonization Group meeting at the Food and Drug Administration, February 16, 2001. , 2003, Value in health : the journal of the International Society for Pharmacoeconomics and Outcomes Research.

[3]  Atul J Butte,et al.  Collaborative Biomedicine in the Age of Big Data: The Case of Cancer , 2014, Journal of medical Internet research.

[4]  Gerd Stumme,et al.  FCA-MERGE: Bottom-Up Merging of Ontologies , 2001, IJCAI.

[5]  Xindong Wu,et al.  Data mining with big data , 2014, IEEE Transactions on Knowledge and Data Engineering.

[6]  Chien-Lung Hsu,et al.  Designing an Intelligent Health Monitoring System and Exploring User Acceptance for the Elderly , 2013, Journal of Medical Systems.

[7]  Pedro M. Domingos,et al.  Ontology Matching: A Machine Learning Approach , 2004, Handbook on Ontologies.

[8]  Jérôme Euzenat,et al.  Specification of a Common Framework for Characterizing Alignment , 2004 .

[9]  Bao-Quoc Ho,et al.  Cluster-based similarity aggregation for ontology matching , 2011, OM.

[10]  Marc Ehrig,et al.  Ontology Alignment: Bridging the Semantic Gap , 2006 .

[11]  C. Quinn,et al.  WellDoc mobile diabetes management randomized controlled trial: change in clinical and behavioral outcomes and patient and physician satisfaction. , 2008, Diabetes technology & therapeutics.

[12]  François Scharffe,et al.  Evaluation of instance matching tools: The experience of OAEI , 2013, J. Web Semant..

[13]  Miguel-Ángel Sicilia,et al.  An empirical study on the evaluation of interlinking tools on the Web of Data , 2014, J. Inf. Sci..

[14]  Hassan Ghasemzadeh,et al.  Dynamic self-adaptive remote health monitoring system for diabetics , 2012, 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society.

[15]  Kai Yang,et al.  A predictive analytics approach to reducing 30-day avoidable readmissions among patients with heart failure, acute myocardial infarction, pneumonia, or COPD , 2015, Health care management science.

[16]  James Pustejovsky,et al.  Lexical Knowledge Representation and Natural Language Processing , 1993, Artif. Intell..

[17]  François Scharffe,et al.  MeLinDa: an interlinking framework for the web of data , 2011, ArXiv.

[18]  Erhard Rahm,et al.  Towards Large-Scale Schema and Ontology Matching , 2011, Schema Matching and Mapping.

[19]  Jimeng Sun,et al.  MatrixFlow: Temporal Network Visual Analytics to Track Symptom Evolution during Disease Progression , 2012, AMIA.

[20]  Yi Li,et al.  RiMOM: A Dynamic Multistrategy Ontology Alignment Framework , 2009, IEEE Transactions on Knowledge and Data Engineering.

[21]  Gang-hoon Kim,et al.  Potentiality of Big Data in the Medical Sector: Focus on How to Reshape the Healthcare System , 2013, Healthcare informatics research.

[22]  Sharon E. Straus,et al.  The impact of the electronic medical record on structure, process, and outcomes within primary care: a systematic review of the evidence , 2011, J. Am. Medical Informatics Assoc..

[23]  Glenn D. Steele,et al.  Leveraging Data to Systematically Improve Care: Coronary Artery Disease Management at Geisinger , 2014, The Journal of ambulatory care management.

[24]  Sarah Morgan Powering Search: The Role of Thesauri in New Information Environments , 2013 .

[25]  Tim Berners-Lee,et al.  Linked Data - The Story So Far , 2009, Int. J. Semantic Web Inf. Syst..

[26]  Christophe Guéret Digital archives as versatile platforms for sharing and interlinking research artefacts , 2013, DPRMA '13.

[27]  Chien-Hung Chen,et al.  Electrophysiological Signal Analysis and Visualization using Cloudwave for Epilepsy Clinical Research , 2013, MedInfo.

[28]  Daniela Giordano,et al.  Linked education: interlinking educational resources and the Web of data , 2012, SAC '12.

[29]  Boris Motik,et al.  MAFRA - A MApping FRAmework for Distributed Ontologies , 2002, EKAW.

[30]  K. S. Raghavan,et al.  Relationships in the Organization of Knowledge , 2001 .

[31]  Jane Greenberg Theoretical Considerations of Lifecycle Modeling: An Analysis of the Dryad Repository Demonstrating Automatic Metadata Propagation, Inheritance, and Value System Adoption , 2009 .