The RSC chromatin remodelling enzyme has a unique role in directing the accurate positioning of nucleosomes
暂无分享,去创建一个
[1] P. Becker,et al. Nucleosome dynamics and epigenetic stability. , 2010, Essays in biochemistry.
[2] Aviv Regev,et al. The Role of Nucleosome Positioning in the Evolution of Gene Regulation , 2010, PLoS biology.
[3] N. Barkai,et al. which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Widespread remodeling of mid-coding sequence nucleosomes by Isw1 , 2010 .
[4] Xin Wang,et al. A RSC/Nucleosome Complex Determines Chromatin Architecture and Facilitates Activator Binding , 2010, Cell.
[5] Tobias Straub,et al. Schizosaccharomyces pombe genome-wide nucleosome mapping reveals positioning mechanisms distinct from those of Saccharomyces cerevisiae , 2010, Nature Structural &Molecular Biology.
[6] Xi He,et al. Divergent human remodeling complexes remove nucleosomes from strong positioning sequences , 2009, Nucleic acids research.
[7] A. Travers,et al. Nucleosome positioning--what do we really know? , 2009, Molecular bioSystems.
[8] Cizhong Jiang,et al. A compiled and systematic reference map of nucleosome positions across the Saccharomyces cerevisiae genome , 2009, Genome Biology.
[9] G. Narlikar,et al. Chromatin remodelers act globally, sequence positions nucleosomes locally. , 2009, Journal of molecular biology.
[10] E. Segal,et al. What controls nucleosome positions? , 2009, Trends in genetics : TIG.
[11] K. Struhl,et al. Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo , 2009, Nature Structural &Molecular Biology.
[12] B. Cairns,et al. The biology of chromatin remodeling complexes. , 2009, Annual review of biochemistry.
[13] H. Madhani,et al. Mechanisms that Specify Promoter Nucleosome Location and Identity , 2009, Cell.
[14] Noam Kaplan,et al. Gene expression divergence in yeast is coupled to evolution of DNA-encoded nucleosome organization , 2009, Nature Genetics.
[15] S. Barbarić,et al. Differential Cofactor Requirements for Histone Eviction from Two Nucleosomes at the Yeast PHO84 Promoter Are Determined by Intrinsic Nucleosome Stability , 2009, Molecular and Cellular Biology.
[16] Irene K. Moore,et al. The DNA-encoded nucleosome organization of a eukaryotic genome , 2009, Nature.
[17] Bryan J Venters,et al. A canonical promoter organization of the transcription machinery and its regulators in the Saccharomyces genome , 2008, Genome research.
[18] Christopher L. Warren,et al. A library of yeast transcription factor motifs reveals a widespread function for Rsc3 in targeting nucleosome exclusion at promoters. , 2008, Molecular cell.
[19] Yaniv Lubling,et al. Distinct Modes of Regulation by Chromatin Encoded through Nucleosome Positioning Signals , 2008, PLoS Comput. Biol..
[20] Bryan J Venters,et al. A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome. , 2008, Genome research.
[21] Steven M. Johnson,et al. A high-resolution, nucleosome position map of C. elegans reveals a lack of universal sequence-dictated positioning. , 2008, Genome research.
[22] G. Schnitzler. Control of Nucleosome Positions by DNA Sequence and Remodeling Machines , 2008, Cell Biochemistry and Biophysics.
[23] Stephan C. Schuster,et al. Nucleosome organization in the Drosophila genome , 2008, Nature.
[24] E. O’Shea,et al. Chromatin decouples promoter threshold from dynamic range , 2008, Nature.
[25] Dustin E. Schones,et al. Dynamic Regulation of Nucleosome Positioning in the Human Genome , 2008, Cell.
[26] B. Cairns,et al. RSC regulates nucleosome positioning at Pol II genes and density at Pol III genes , 2008, The EMBO journal.
[27] Steven J. M. Jones,et al. Dynamic Remodeling of Individual Nucleosomes Across a Eukaryotic Genome in Response to Transcriptional Perturbation , 2007, PLoS biology.
[28] Oliver J. Rando,et al. Chromatin remodelling at promoters suppresses antisense transcription , 2007, Nature.
[29] K. Rippe,et al. DNA sequence- and conformation-directed positioning of nucleosomes by chromatin-remodeling complexes , 2007, Proceedings of the National Academy of Sciences.
[30] Ronald W. Davis,et al. A high-resolution atlas of nucleosome occupancy in yeast , 2007, Nature Genetics.
[31] I. Albert,et al. Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome , 2007, Nature.
[32] Jun S. Song,et al. High-throughput mapping of the chromatin structure of human promoters , 2007, Nature Biotechnology.
[33] Neil D Clarke,et al. Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection. , 2006, Genome research.
[34] M. Hattori,et al. A large-scale full-length cDNA analysis to explore the budding yeast transcriptome , 2006, Proceedings of the National Academy of Sciences.
[35] Carlos Bustamante,et al. DNA translocation and loop formation mechanism of chromatin remodeling by SWI/SNF and RSC. , 2006, Molecular cell.
[36] I. Albert,et al. Nucleosome positions predicted through comparative genomics , 2006, Nature Genetics.
[37] Irene K. Moore,et al. A genomic code for nucleosome positioning , 2006, Nature.
[38] G. Längst,et al. Nucleosome Stability at the Yeast PHO5 and PHO8 Promoters Correlates with Differential Cofactor Requirements for Chromatin Opening , 2005, Molecular and Cellular Biology.
[39] S. Schreiber,et al. Histone Variant H2A.Z Marks the 5′ Ends of Both Active and Inactive Genes in Euchromatin , 2005, Cell.
[40] Lani F. Wu,et al. Genome-Scale Identification of Nucleosome Positions in S. cerevisiae , 2005, Science.
[41] S. Schreiber,et al. Global nucleosome occupancy in yeast , 2004, Genome Biology.
[42] Philipp Korber,et al. In Vitro Assembly of the Characteristic Chromatin Organization at the Yeast PHO5 Promoter by a Replication-independent Extract System* , 2004, Journal of Biological Chemistry.
[43] B. Pugh,et al. Identification and Distinct Regulation of Yeast TATA Box-Containing Genes , 2004, Cell.
[44] Andrew Flaus,et al. Dynamic Properties of Nucleosomes during Thermal and ATP-Driven Mobilization , 2003, Molecular and Cellular Biology.
[45] E. O’Shea,et al. Global analysis of protein expression in yeast , 2003, Nature.
[46] E. O’Shea,et al. Global analysis of protein localization in budding yeast , 2003, Nature.
[47] L. Fulton,et al. Finding Functional Features in Saccharomyces Genomes by Phylogenetic Footprinting , 2003, Science.
[48] B. Birren,et al. Sequencing and comparison of yeast species to identify genes and regulatory elements , 2003, Nature.
[49] C. Peterson,et al. Structural analysis of the yeast SWI/SNF chromatin remodeling complex , 2003, Nature Structural Biology.
[50] J. Widom,et al. Role of DNA sequence in nucleosome stability and dynamics , 2001, Quarterly Reviews of Biophysics.
[51] G. Längst,et al. dMi‐2 and ISWI chromatin remodelling factors have distinct nucleosome binding and mobilization properties , 2000, The EMBO journal.
[52] M. Münsterkötter,et al. Transcriptional Regulation of the Yeast PHO8 Promoter in Comparison to the Coregulated PHO5 Promoter* , 2000, The Journal of Biological Chemistry.
[53] S. Holmberg,et al. Transcriptional repression of the yeast CHA1 gene requires the chromatin‐remodeling complex RSC , 1999, The EMBO journal.
[54] C. Peterson,et al. The core histone N-terminal domains are required for multiple rounds of catalytic chromatin remodeling by the SWI/SNF and RSC complexes. , 1999, Biochemistry.
[55] B. Cairns,et al. Two actin-related proteins are shared functional components of the chromatin-remodeling complexes RSC and SWI/SNF. , 1998, Molecular cell.
[56] P. Gregory,et al. Analyzing chromatin structure and transcription factor binding in yeast. , 1998, Methods.
[57] T. Richmond,et al. Crystal structure of the nucleosome core particle at 2.8 Å resolution , 1997, Nature.
[58] V. Iyer,et al. Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure. , 1995, The EMBO journal.
[59] J. Schmitz,et al. A nucleosome precludes binding of the transcription factor Pho4 in vivo to a critical target site in the PHO5 promoter. , 1994, The EMBO journal.
[60] K. Fascher,et al. Activation of the weakly regulated PHO8 promoter in S. cerevisiae: chromatin transition and binding sites for the positive regulatory protein PHO4. , 1992, Nucleic acids research.
[61] R. Simpson. Nucleosome positioning can affect the function of a cis-acting DMA elementin vivo , 1990, Nature.
[62] H. Drew,et al. Sequence periodicities in chicken nucleosome core DNA. , 1986, Journal of molecular biology.
[63] A. Hinnen,et al. Removal of positioned nucleosomes from the yeast PHO5 promoter upon PHO5 induction releases additional upstream activating DNA elements. , 1986, The EMBO journal.
[64] R. Simpson,et al. Conformation of DNA in chromatin core particles containing poly(dAdT)-poly(dAdT) studied by 31 P NMR spectroscopy. , 1979, Nucleic acids research.