Interaction, functional relations and evolution of large and small subunits in Rubisco from prokaryota and eukaryota.

In early biological evolution anoxygenic photosynthetic bacteria may have been established through the acquisition of ribulose bisphosphate carboxylase-oxygenase (Rubisco). The establishment of cyanobacteria may have followed and led to the production of atmospheric oxygen. It has been postulated that a unicellular cyanobacterium evolved to cyanelles which were evolutionary precursors of chloroplasts of both green and non-green algae. The latter probably diverged from ancestors of green algae as evidenced by the occurrence of large (L) and small (S) subunit genes for Rubisco in the chloroplast genome of the chromophytic algae Olisthodiscus luteus. In contrast, the gene for the S subunit was integrated into the nucleus in the evolution of green algae and higher plants. The evolutionary advantages of this integration are uncertain because the function of S subunits is unknown. Recently, two forms of Rubisco (L8 and L8S8) of almost equivalent carboxylase and oxygenase activity have been isolated from the photosynthetic bacterium Chromatium vinosum. This observation perpetuates the enigma of S subunit function. Current breakthroughs are imminent, however, in our understanding of the function of catalytic L subunits because of the application of deoxyoligonucleotide-directed mutagenesis. Especially interesting mutated Rubisco molecules may have either enhanced carboxylase activity or higher carboxylase:oxygenase ratios. Tests of expression, however, must await the insertion of modified genes into the nucleus and chloroplasts. Methodology to accomplish chloroplast transformation is as yet unavailable. Recently, we have obtained the first transformation of cyanobacteria by a colE1 plasmid. We regard this transformation as an appropriate model for chloroplast transformation.

[1]  R. A. Cattolico,et al.  Inverted repeat of Olisthodiscus luteus chloroplast DNA contains genes for both subunits of ribulose-1,5-bisphosphate carboxylase and the 32,000-dalton Q(B) protein: Phylogenetic implications. , 1986, Proceedings of the National Academy of Sciences of the United States of America.

[2]  F. Tabita,et al.  Expression and assembly of active cyanobacterial ribulose-1,5-bisphosphate carboxylase/oxygenase in Escherichia coli containing stoichiometric amounts of large and small subunits. , 1985, Proceedings of the National Academy of Sciences of the United States of America.

[3]  M. Estelle,et al.  Site-specific mutagenesis of ribulose-1,5-bisphosphate carboxylase/oxygenase. Evidence that carbamate formation at Lys 191 is required for catalytic activity. , 1985, The Journal of biological chemistry.

[4]  Y. Igarashi,et al.  Active site histidine in spinach ribulosebisphosphate carboxylase/oxygenase modified by diethyl pyrocarbonate. , 1985, Biochemistry.

[5]  P. Weisbeek,et al.  The plant ferredoxin precursor: nucleotide sequence of a full length cDNA clone. , 1985, Nucleic acids research.

[6]  G. Lorimer,et al.  Catalytic properties of a hybrid between cyanobacterial large subunits and higher plant small subunits of ribulose bisphosphate carboxylase-oxygenase. , 1985, The Journal of biological chemistry.

[7]  S. M. Vies,et al.  Assembly in E. coli of a functional multi-subunit ribulose bisphosphate carboxylase from a blue-green alga , 1985, Nature.

[8]  D. Jordan,et al.  Subunit dissociation and reconstitution of ribulose-1,5-bisphosphate carboxylase from Chromatium vinosum. , 1985, Archives of biochemistry and biophysics.

[9]  J. Chory,et al.  DNA-directed in vitro synthesis and assembly of the form II D-ribulose-1,5-bisphosphate carboxylase/oxygenase from Rhodopseudomonas sphaeroides , 1985, Journal of bacteriology.

[10]  I. Sigal,et al.  A site‐specific mutation within the active site of ribulose‐1,5‐bisphosphate carboxylase of Rhodospirillum rubrum , 1984, The EMBO journal.

[11]  F. Tabita,et al.  Cloning and expression in Escherichia coli of the form II ribulose 1,5-bisphosphate carboxylase/oxygenase gene from Rhodopseudomonas sphaeroides. , 1984, Gene.

[12]  A. Gatenby The properties of the large subunit of maize ribulose bisphosphate carboxylase/oxygenase synthesised in Escherichia coli. , 1984, European journal of biochemistry.

[13]  R. Haselkorn,et al.  Cotranscription of genes encoding the small and large subunits of ribulose-1,5-bisphosphate carboxylase in the cyanobacterium Anabaena 7120. , 1984, Proceedings of the National Academy of Sciences of the United States of America.

[14]  F. C. Hartman,et al.  Preliminary structural studies of ribulose-1,5-bisphosphate carboxylase/oxygenase from Rhodospirillum rubrum. , 1984, The Journal of biological chemistry.

[15]  A. Incharoensakdi,et al.  Essentiality of the small subunit (B) in the catalysis of RuBP carboxylase/oxygenase is not related to substrate-binding in the large subunit (A). , 1984, Biochemical and biophysical research communications.

[16]  T. Andrews,et al.  Active-site carbamate formation and reaction-intermediate-analog binding by ribulosebisphosphate carboxylase/oxygenase in the absence of its small subunits. , 1984, Proceedings of the National Academy of Sciences of the United States of America.

[17]  K. Shinozaki,et al.  The gene for the small subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase is located close to the gene for the large subunit in the cyanobacterium Anacystis nidulans 6301. , 1983, Nucleic acids research.

[18]  N. Takahata,et al.  Molecular cloning and sequence analysis of the cyanobacterial gene for the large subunit of ribulose-1,5-bisphosphate carboxylase/oxygenase. , 1983, Proceedings of the National Academy of Sciences of the United States of America.

[19]  T. Andrews,et al.  The function of the small subunits of ribulose bisphosphate carboxylase-oxygenase. , 1983, The Journal of biological chemistry.

[20]  B. McFadden,et al.  Pyridoxal phosphate as a probe in the active site of ribulose bisphosphate carboxylase/oxygenase. , 1983, Archives of biochemistry and biophysics.

[21]  P. Gollnick,et al.  Interaction of ribulose bisphosphate carboxylase/oxygenase with 2-carboxyhexitol 1,6-bisphosphates. , 1983, Archives of biochemistry and biophysics.

[22]  M. Berhow,et al.  Rapid purification of D-ribulose 1,5-bisphosphate carboxylase by vertical sedimentation in a reoriented gradient , 1982 .

[23]  K. M. Abel,et al.  Kinetics and subunit interactions of ribulose bisphosphate carboxylase-oxygenase from the cyanobacterium, Synechococcus sp. , 1981, The Journal of biological chemistry.

[24]  G. Zurawski,et al.  The structure of the gene for the large subunit of ribulose 1,5-bisphosphate carboxylase from spinach chloroplast DNA. , 1981, Nucleic acids research.

[25]  D. Jordan,et al.  Species variation in the specificity of ribulose biphosphate carboxylase/oxygenase , 1981, Nature.

[26]  S. P. Gibbs THE CHLOROPLASTS OF SOME ALGAL GROUPS MAY HAVE EVOLVED FROM ENDOSYMBIOTIC EUKARYOTIC ALGAE , 1981, Annals of the New York Academy of Sciences.

[27]  P. Langridge Synthesis of the large subunit of spinach ribulose bisphosphate carboxylase may involve a precursor polypeptide , 1981 .

[28]  B. McFadden A perspective of ribulose bisphosphate carboxylase/oxygenase, the key catalyst in photosynthesis and photorespiration , 1980 .

[29]  R. Chollet,et al.  Presence of two subunit types in ribulose 1,5-bisphosphate carboxylase from Thiobacillus intermedius , 1980, Journal of bacteriology.

[30]  R. Ellis The most abundant protein in the world , 1979 .

[31]  S. Wildman Aspects of fraction 1 protein evolution. , 1979, Archives of biochemistry and biophysics.

[32]  F. C. Hartman,et al.  Isolation, characterization, and crystallization of ribulosebisphosphate carboxylase from autotrophically grown Rhodospirillum rubrum , 1979, Journal of bacteriology.

[33]  F. C. Hartman,et al.  Inactivation of ribulosebisphosphate carboxylase by modification of arginyl residues with phenylglyoxal. , 1978, Biochemistry.

[34]  T. Andrews Photorespiration — still unavoidable? , 1978 .

[35]  B. McFadden,et al.  Modification of ribulose bisphosphate carboxylase by 2,3-butadione. , 1978, Biochemical and biophysical research communications.

[36]  B. McFadden,et al.  Purification, quaternary structure, composition, and properties of D-ribulose-1,5-bisphosphate carboxylase from Thiobacillus intermedius , 1976, Journal of bacteriology.

[37]  W. Laing,et al.  Regulation of Soybean Net Photosynthetic CO(2) Fixation by the Interaction of CO(2), O(2), and Ribulose 1,5-Diphosphate Carboxylase. , 1974, Plant physiology.

[38]  F. Tabita,et al.  D-ribulose-1, 5-diphosphate carboxylase and the evolution of autotrophy. , 1974, Bio Systems.

[39]  B. McFadden The oxygenase activity of ribulose-1,5-bisphosphate carboxylase from Rhodospirillum rubrum. , 1974, Biochemical and biophysical research communications.

[40]  B. McFadden Autotrophic CO2 assimilation and the evolution of ribulose diphosphate carboxylase. , 1973, Bacteriological reviews.

[41]  Lorimer Gh,et al.  Ribulose diphosphate oxygenase. II. Further proof of reaction products and mechanism of action. , 1973 .

[42]  G. Lorimer,et al.  Ribulose diphosphate oxygenase. I. Synthesis of phosphoglycolate by fraction-1 protein of leaves. , 1973, Biochemistry.

[43]  S. Wildman,et al.  Chloroplast DNA codes for the primary structure of the large subunit of fraction I protein. , 1972, Biochimica et biophysica acta.

[44]  F. Tabita,et al.  Regulation of ribulose-1,5-diphosphate carboxylase by 6-phospho-D-gluconate. , 1972, Biochemical and biophysical research communications.

[45]  S. Wildman,et al.  Studies on fraction I protein. IV. Mode of inheritance of primary structure in relation to whether chloroplast or nuclear DNA contains the code for a chloroplast protein. , 1972, Biochimica et biophysica acta.

[46]  W. Ogren,et al.  Ribulose diphosphate carboxylase regulates soybean photorespiration. , 1971, Nature: New biology.

[47]  R. A. Cattolico,et al.  Chloroplast biosystematics: chloroplast DNA as a molecular probe. , 1985, Bio Systems.

[48]  J. William Schopf,et al.  Earth's earliest biosphere : its origin and evolution , 1983 .

[49]  B. McFadden,et al.  Chemosynthetic, photosynthetic, and cyanobacterial ribulose bisphosphate carboxylase. , 1978, Basic life sciences.

[50]  M. Herdman,et al.  The cyanelle: Chloroplast or endosymbiotic prokaryote? , 1977 .

[51]  F. Tabita,et al.  Ribulose-diphosphate carboxylase from the hydrogen bacteria and Rhodospirillum rubrum. , 1975, Methods in enzymology.