Construction of versatile yeast plasmid vectors transferable by Agrobacterium-mediated transformation and their application to bread-making yeast strains.

[1]  T. Hisatomi,et al.  Isolation, identification, and characterization of wild budding yeasts from rose flowers in Fukuyama city, Hiroshima, Japan, and their application in bread and wine production , 2021, Mycoscience.

[2]  C. Lartigue,et al.  Budding yeast as a factory to engineer partial and complete microbial genomes , 2020, Current Opinion in Systems Biology.

[3]  Yuta Ohmine,et al.  Enhanced Agrobacterium‐mediated transformation revealed attenuation of exogenous plasmid DNA installation in recipient bacteria by exonuclease VII and SbcCD , 2020, Genes to cells : devoted to molecular & cellular mechanisms.

[4]  B. Andrews,et al.  Genetic profiling of protein burden and nuclear export overload , 2020, bioRxiv.

[5]  D. Na,et al.  Artificial transformation methodologies for improving the efficiency of plasmid DNA transformation and simplifying its use , 2019, Applied Microbiology and Biotechnology.

[6]  G. P. V. van Heusden,et al.  Complete Sequence of Succinamopine Ti-Plasmid pTiEU6 Reveals Its Evolutionary Relatedness with Nopaline-Type Ti-Plasmids , 2019, Genome biology and evolution.

[7]  Yuta Ohmine,et al.  Successful Transfer of a Model T-DNA Plasmid to E. coli Revealed Its Dependence on Recipient RecA and the Preference of VirD2 Relaxase for Eukaryotes Rather Than Bacteria as Recipients , 2018, Front. Microbiol..

[8]  S. Gelvin.  Integration of Agrobacterium T-DNA into the Plant Genome. , 2017, Annual review of genetics.

[9]  K. Verstrepen,et al.  Bread Dough and Baker's Yeast: An Uplifting Synergy. , 2017, Comprehensive reviews in food science and food safety.

[10]  Guangbo Liu,et al.  High-throughput transformation of Saccharomyces cerevisiae using liquid handling robots , 2017, PloS one.

[11]  I. S. Pretorius,et al.  Synthetic genome engineering forging new frontiers for wine yeast , 2017, Critical reviews in biotechnology.

[12]  A. Krivoruchko,et al.  Industrial systems biology and its impact on synthetic biology of yeast cell factories. , 2016, Biotechnology and bioengineering.

[13]  Yuta Ohmine,et al.  DNA repair genes RAD52 and SRS2, a cell wall synthesis regulator gene SMI1, and the membrane sterol synthesis scaffold gene ERG28 are important in efficient Agrobacterium-mediated yeast transformation with chromosomal T-DNA , 2016, BMC Microbiology.

[14]  Travis Ostbye,et al.  New vectors for simple and streamlined CRISPR–Cas9 genome editing in Saccharomyces cerevisiae , 2015, Yeast.

[15]  Ken Motohashi,et al.  A simple and efficient seamless DNA cloning method using SLiCE from Escherichia coli laboratory strains and its application to SLiP site-directed mutagenesis , 2015, BMC Biotechnology.

[16]  E. Nester.  Agrobacterium: nature’s genetic engineer , 2015, Front. Plant Sci..

[17]  Jan Steensels,et al.  Improving industrial yeast strains: exploiting natural and artificial diversity , 2014, FEMS microbiology reviews.

[18]  P. Hooykaas,et al.  Involvement of Rad52 in T‐DNA circle formation during Agrobacterium tumefaciens‐mediated transformation of Saccharomyces cerevisiae , 2014, Molecular microbiology.

[19]  H. Alper,et al.  Frontiers of yeast metabolic engineering: diversifying beyond ethanol and Saccharomyces. , 2013, Current Opinion in Biotechnology.

[20]  Jinkui Yang,et al.  Molecular tools for functional genomics in filamentous fungi: recent advances and new strategies. , 2013, Biotechnology advances.

[21]  K. Kitamoto,et al.  Breeding research on sake yeasts in Japan: history, recent technological advances, and future perspectives. , 2013, Annual review of food science and technology.

[22]  K. Kiyokawa,et al.  Yeast transformation mediated by Agrobacterium strains harboring an Ri plasmid: comparative study between GALLS of an Ri plasmid and virE of a Ti plasmid , 2012, Genes to cells : devoted to molecular & cellular mechanisms.

[23]  D. Botstein,et al.  Yeast: An Experimental Organism for 21st Century Biology , 2011, Genetics.

[24]  Michael Snyder,et al.  Systems biology from a yeast omics perspective , 2009, FEBS letters.

[25]  K. Kiyokawa,et al.  Novel Toxin-Antitoxin System Composed of Serine Protease and AAA-ATPase Homologues Determines the High Level of Stability and Incompatibility of the Tumor-Inducing Plasmid pTiC58 , 2009, Journal of bacteriology.

[26]  K. Kiyokawa,et al.  Construction of Disarmed Ti Plasmids Transferable between Escherichia coli and Agrobacterium Species , 2009, Applied and Environmental Microbiology.

[27]  A. Ram,et al.  Agrobacterium-mediated transformation as a tool for functional genomics in fungi , 2005, Current Genetics.

[28]  R. D. Gietz,et al.  Genetic transformation of yeast. , 2001, BioTechniques.

[29]  J. Boeke,et al.  Designer deletion strains derived from Saccharomyces cerevisiae S288C: A useful set of strains and plasmids for PCR‐mediated gene disruption and other applications , 1998, Yeast.

[30]  K. Stephens,et al.  Agrobacterium tumefaciens-mediated transformation of yeast. , 1996, Proceedings of the National Academy of Sciences of the United States of America.

[31]  P. Hooykaas,et al.  Trans‐kingdom T‐DNA transfer from Agrobacterium tumefaciens to Saccharomyces cerevisiae. , 1995, The EMBO journal.

[32]  Elizabeth E. Hood,et al.  NewAgrobacterium helper plasmids for gene transfer to plants , 1993, Transgenic Research.

[33]  C. Locht,et al.  Isolation and molecular characterization of a novel broad‐host‐range plasmid from Bordetella bronchiseptica with sequence similarities to plasmids from Gram‐positive organisms , 1992, Molecular microbiology.

[34]  R. Sikorski,et al.  A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. , 1989, Genetics.

[35]  M. Chilton,et al.  The hypervirulence of Agrobacterium tumefaciens A281 is encoded in a region of pTiBo542 outside of T-DNA , 1986, Journal of bacteriology.

[36]  Yasuyuki Yamada,et al.  A novel method for transformation of intact yeast cells by electroinjection of plasmid DNA , 1985, Applied Microbiology and Biotechnology.

[37]  M. Bevan,et al.  Binary Agrobacterium vectors for plant transformation. , 1984, Nucleic acids research.

[38]  P. Hirsch,et al.  A binary plant vector strategy based on separation of vir- and T-region of the Agrobacterium tumefaciens Ti-plasmid , 1983, Nature.

[39]  K. Murata,et al.  Transformation of intact yeast cells treated with alkali cations , 1983 .

[40]  R. Schiestl,et al.  Large-scale high-efficiency yeast transformation using the LiAc/SS carrier DNA/PEG method , 2007, Nature Protocols.