Homologs of the Hh signalling network in C. elegans.

In Drosophila and vertebrates, Hedgehog (Hh) signalling is mediated by a cascade of genes, which play essential roles in cell proliferation and survival, and in patterning of the embryo, limb buds and organs. In C. elegans, this pathway has undergone considerable evolutionary divergence; genes encoding homologues of key pathway members, including Hh, Smoothened, Cos2, Fused and Suppressor of Fused, are absent. Surprisingly, over sixty proteins (i.e. WRT, GRD, GRL, and QUA), encoded by a set of genes collectively referred to as the Hh-related genes, and two co-orthologs (PTC-1,-3) of fly Patched, a Hh receptor, are present in C. elegans. Several of the Hh-related proteins are bipartite and all can potentially generate peptides with signalling activity, although none of these peptides shares obvious sequence similarity with Hh. In addition, the ptc-related (ptr) genes, which are present in a single copy in Drosophila and vertebrates and encode proteins closely related to Patched, have undergone an expansion in number in nematodes. A number of functions, including roles in molting, have been attributed to the C. elegans Hh-related, PTC and PTR proteins; most of these functions involve processes that are associated with the trafficking of proteins, sterols or sterol-modified proteins. Genes encoding other components of the Hh signalling pathway are also found in C. elegans, but their functions remain to be elucidated.

[1]  G. Jefferis,et al.  A C. elegans patched gene, ptc-1, functions in germ-line cytokinesis. , 2000, Genes & development.

[2]  Abstract , 1952 .

[3]  V. Matyash,et al.  Open access, freely available online PLoS BIOLOGY Sterol-Derived Hormone(s) Controls Entry into Diapause in Caenorhabditis elegans by , 2022 .

[4]  G. Niklaus,et al.  Caenorhabditis elegans has scores of hedgehog-related genes: sequence and expression analysis. , 1999, Genome research.

[5]  E. Perens,et al.  C. elegans daf-6 encodes a patched-related protein required for lumen formation. , 2005, Developmental cell.

[6]  T. Bürglin,et al.  The hedgehog-related gene wrt-5 is essential for hypodermal development in Caenorhabditis elegans. , 2006, Developmental biology.

[7]  T. Tabata,et al.  The Drosophila hedgehog gene is expressed specifically in posterior compartment cells and is a target of engrailed regulation. , 1992, Genes & development.

[8]  J. Taipale,et al.  The Hedgehog and Wnt signalling pathways in cancer , 2001, Nature.

[9]  J. Knox Abstract of article , 2001, Chinese Journal of Integrative Medicine.

[10]  R. Nusse Wnts and Hedgehogs: lipid-modified proteins and similarities in signaling mechanisms at the cell surface , 2003, Development.

[11]  M. Han,et al.  A gp330/megalin-related protein is required in the major epidermis of Caenorhabditis elegans for completion of molting. , 1999, Development.

[12]  Chao Tong,et al.  Smoothened transduces Hedgehog signal by physically interacting with Costal2/Fused complex through its C-terminal tail. , 2003, Genes & development.

[13]  M. Labouesse,et al.  The sterol-sensing domain: multiple families, a unique role? , 2002, Trends in genetics : TIG.

[14]  Tetsuya Tabata,et al.  Three Drosophila EXT genes shape morphogen gradients through synthesis of heparan sulfate proteoglycans , 2004, Development.

[15]  C. Schneider,et al.  Cloning and characterization of the C. elegans gas1 homolog: phas-1. , 2002, Biochimica et biophysica acta.

[16]  D. Chitwood Biochemistry and function of nematode steroids. , 1999, Critical reviews in biochemistry and molecular biology.

[17]  J. Thompson,et al.  The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. , 1997, Nucleic acids research.

[18]  L. Ruel,et al.  Stability and association of Smoothened, Costal2 and Fused with Cubitus interruptus are regulated by Hedgehog , 2003, Nature Cell Biology.

[19]  Piotr Mikolajczyk,et al.  A+A+C , 1964 .

[20]  P. Kuwabara,et al.  tra-2 encodes a membrane protein and may mediate cell communication in the Caenorhabditis elegans sex determination pathway. , 1992, Molecular biology of the cell.

[21]  J. Mohler,et al.  Molecular organization and embryonic expression of the hedgehog gene involved in cell-cell communication in segmental patterning of Drosophila. , 1992, Development.

[22]  R. Blelloch,et al.  TRA-1/GLI controls development of somatic gonadal precursors in C. elegans , 2004, Development.

[23]  M. Basson,et al.  A model for Niemann–Pick type C disease in the nematode Caenorhabditis elegans , 2000, Current Biology.

[24]  J. Hodgkin,et al.  Molecular analysis of the C. elegans sex-determining gene tra-1: A gene encoding two zinc finger proteins , 1992, Cell.

[25]  P. Beachy,et al.  Cholesterol Modification of Hedgehog Signaling Proteins in Animal Development , 1996, Science.

[26]  A. Bale Hedgehog signaling and human disease. , 2002, Annual review of genomics and human genetics.

[27]  M. Rothstein,et al.  Sterol Requirement for Reproduction of a Free-Living Nematode , 1968, Science.

[28]  David M. Berman,et al.  Tissue repair and stem cell renewal in carcinogenesis , 2004, Nature.

[29]  L. Lum,et al.  Hedgehog signal transduction via Smoothened association with a cytoplasmic complex scaffolded by the atypical kinesin, Costal-2. , 2003, Molecular cell.

[30]  Saigo Kaoru,et al.  Structure and expression of hedgehog, a Drosophila segment-polarity gene required for cell-cell communication. , 1993 .

[31]  E. Hafen,et al.  Dispatched, a Novel Sterol-Sensing Domain Protein Dedicated to the Release of Cholesterol-Modified Hedgehog from Signaling Cells , 1999, Cell.

[32]  J. Hodgkin Two types of sex determination in a nematode , 1983, Nature.

[33]  J. Yates,et al.  Dissection of the Mammalian Midbody Proteome Reveals Conserved Cytokinesis Mechanisms , 2004, Science.

[34]  T. Bürglin,et al.  Warthog and Groundhog, novel families related to Hedgehog , 1996, Current Biology.

[35]  M. Labouesse,et al.  CHE-14, a protein with a sterol-sensing domain, is required for apical sorting in C. elegans ectodermal epithelial cells , 2000, Current Biology.

[36]  S. Higashijima,et al.  Structure and expression of hedgehog, a Drosophila segment-polarity gene required for cell-cell communication. , 1993, Gene.

[37]  P. Beachy,et al.  A potential catalytic site revealed by the 1.7-Å crystal structure of the amino-terminal signalling domain of Sonic hedgehog , 1995, Nature.

[38]  A. Taylor,et al.  A protein with several possible membrane-spanning domains encoded by the Drosophila segment polarity gene patched , 1989, Nature.

[39]  P. Ingham,et al.  Hedgehog signaling in animal development: paradigms and principles. , 2001, Genes & development.

[40]  James H. Thomas,et al.  NCR-1 and NCR-2, the C. elegans homologs of the human Niemann-Pick type C1 disease protein, function upstream of DAF-9 in the dauer formation pathways , 2004, Development.

[41]  C. Nüsslein-Volhard,et al.  Mutations affecting segment number and polarity in Drosophila , 1980, Nature.

[42]  P. Beachy,et al.  Multiple roles of cholesterol in hedgehog protein biogenesis and signaling. , 1997, Cold Spring Harbor symposia on quantitative biology.

[43]  Xinhua Lin,et al.  Distinct and collaborative roles of Drosophila EXT family proteins in morphogen signalling and gradient formation , 2004, Development.

[44]  P. Beachy,et al.  Secretion and localized transcription suggest a role in positional signaling for products of the segmentation gene hedgehog , 1992, Cell.

[45]  G. Struhl,et al.  In vivo evidence that Patched and Smoothened constitute distinct binding and transducing components of a Hedgehog receptor complex. , 1998, Development.

[46]  B. Sanson,et al.  The glypican Dally-like is required for Hedgehog signalling in the embryonic epidermis of Drosophila , 2003, Development.

[47]  Lawrence Lum,et al.  The Hedgehog Response Network: Sensors, Switches, and Routers , 2004, Science.

[48]  J. N. Thomson,et al.  Mutant sensory cilia in the nematode Caenorhabditis elegans. , 1986, Developmental biology.

[49]  J. J. Lee,et al.  Autoproteolysis in hedgehog protein biogenesis. , 1994, Science.

[50]  E V Koonin,et al.  A protein splice-junction motif in hedgehog family proteins. , 1995, Trends in biochemical sciences.

[51]  P. Berninsone,et al.  The nematode Caenorhabditis elegans as a model to study the roles of proteoglycans , 2002, Glycoconjugate Journal.

[52]  Marina Pasca di Magliano,et al.  Hedgehog signalling in cancer formation and maintenance , 2003, Nature Reviews Cancer.

[53]  P. Ingham,et al.  smoothened encodes a receptor-like serpentine protein required for hedgehog signalling , 1996, Nature.

[54]  M. Kaghad,et al.  Cloning and characterization of the , 1996 .

[55]  M. Ascano,et al.  Identification of a Functional Interaction between the Transmembrane Protein Smoothened and the Kinesin-Related Protein Costal2 , 2003, Current Biology.

[56]  E. Koonin,et al.  Crystal Structure of a Hedgehog Autoprocessing Domain: Homology between Hedgehog and Self-Splicing Proteins , 1997, Cell.

[57]  J. Berg Genome sequence of the nematode C. elegans: a platform for investigating biology. , 1998, Science.

[58]  M. Scott,et al.  The Drosophila patched gene encodes a putative membrane protein required for segmental patterning , 1989, Cell.

[59]  P. Beachy,et al.  Skinny Hedgehog, an Acyltransferase Required for Palmitoylation and Activity of the Hedgehog Signal , 2001, Science.

[60]  J. Goldstein,et al.  Direct binding of cholesterol to the purified membrane region of SCAP: mechanism for a sterol-sensing domain. , 2004, Molecular cell.

[61]  P. Ingham,et al.  Role of the Drosophila patched gene in positional signalling , 1991, Nature.

[62]  R. Bittman,et al.  Sterol effects and sites of sterol accumulation in Caenorhabditis elegans: developmental requirement for 4alpha-methyl sterols. , 2003, Journal of lipid research.

[63]  T. Belenkaya,et al.  Drosophila glypicans control the cell-to-cell movement of Hedgehog by a dynamin-independent process , 2004, Development.

[64]  M. Cohen,et al.  The hedgehog signaling network , 2003, American journal of medical genetics. Part A.

[65]  Lawrence Lum,et al.  Identification of Hedgehog Pathway Components by RNAi in Drosophila Cultured Cells , 2003, Science.

[66]  J. Rajan,et al.  The function and expansion of the Patched- and Hedgehog-related homologs in C. elegans. , 2005, Genome research.

[67]  M. Rothstein,et al.  Sterol requirement for reproduction of a free-living nematode. , 1968, Science.

[68]  I. Saira Mian,et al.  Statistic Modeling, Phylogenetic Analysis and Strjucture Prediction of a Protein Splicing Domain Common to Infeins and Hedgehog Proteins , 1997, J. Comput. Biol..

[69]  M. Noll,et al.  The Drosophila smoothened Gene Encodes a Seven-Pass Membrane Protein, a Putative Receptor for the Hedgehog Signal , 1996, Cell.

[70]  M. Labouesse,et al.  The hedgehog‐related gene qua‐1 is required for molting in Caenorhabditis elegans , 2006, Developmental dynamics : an official publication of the American Association of Anatomists.

[71]  J. Hooper Smoothened translates Hedgehog levels into distinct responses , 2003, Development.

[72]  Eugene V Koonin,et al.  Hedgehog Patterning Activity: Role of a Lipophilic Modification Mediated by the Carboxy-Terminal Autoprocessing Domain , 1996, Cell.

[73]  V. Matyash,et al.  Distribution and transport of cholesterol in Caenorhabditis elegans. , 2001, Molecular biology of the cell.