Cellular Roles of DNA Polymerase Beta

Since its discovery and purification in 1971, DNA polymerase ß (Pol ß) is one of the most well-studied DNA polymerases. Pol ß is a key enzyme in the base excision repair (BER) pathway that functions in gap filling DNA synthesis subsequent to the excision of damaged DNA bases. A major focus of our studies is on the cellular roles of Pol ß. We have shown that germline and tumor-associated variants of Pol ß catalyze aberrant BER that leads to genomic instability and cellular transformation. Our studies suggest that Pol ß is critical for the maintenance of genomic stability and that it is a tumor suppressor. We have also shown that Pol ß functions during Prophase I of meiosis. Pol ß localizes to the synaptonemal complex and is critical for removal of the Spo11 complex from the 5’ ends of double-strand breaks. Studies with Pol ß mutant mice are currently being undertaken to more clearly understand the function of Pol ß during meiosis. In this review, we will highlight our contributions from our studies of Pol ß germline and cancer-associated variants.

[1]  J. Sweasy,et al.  A Germline Polymorphism of DNA Polymerase Beta Induces Genomic Instability and Cellular Transformation , 2012, PLoS genetics.

[2]  J. Sweasy,et al.  DNA polymerase β variant Ile260Met generates global gene expression changes related to cellular transformation. , 2012, Mutagenesis.

[3]  J. Sweasy,et al.  The E288K colon tumor variant of DNA polymerase β is a sequence specific mutator. , 2012, Biochemistry.

[4]  T. Schlick,et al.  Unfavorable electrostatic and steric interactions in DNA polymerase β E295K mutant interfere with the enzyme's pathway. , 2012, Journal of the American Chemical Society.

[5]  Daniel Zelterman,et al.  Human POLB Gene Is Mutated in High Percentage of Colorectal Tumors* , 2012, The Journal of Biological Chemistry.

[6]  J. Sweasy,et al.  Colon Cancer-associated DNA Polymerase β Variant Induces Genomic Instability and Cellular Transformation* , 2012, The Journal of Biological Chemistry.

[7]  J. Sweasy,et al.  Y265C DNA polymerase beta knockin mice survive past birth and accumulate base excision repair intermediate substrates , 2012, Proceedings of the National Academy of Sciences.

[8]  K. Eckert,et al.  The human gastric cancer-associated DNA polymerase β variant D160N is a mutator that induces cellular transformation. , 2012, DNA repair.

[9]  Naina Phadnis,et al.  New and old ways to control meiotic recombination. , 2011, Trends in genetics : TIG.

[10]  J. Sweasy,et al.  Variant base excision repair proteins: contributors to genomic instability. , 2010, Seminars in cancer biology.

[11]  Daniel Zelterman,et al.  DNA polymerase β is critical for mouse meiotic synapsis , 2010, The EMBO journal.

[12]  K. Kidd,et al.  Population-specific variation in haplotype composition and heterozygosity at the POLB locus. , 2009, DNA repair.

[13]  Zhigang Guo,et al.  Human DNA polymerase β polymorphism, Arg137Gln, impairs its polymerase activity and interaction with PCNA and the cellular base excision repair capacity , 2009, Nucleic acids research.

[14]  W. Heyer,et al.  Biochemistry of Meiotic Recombination: Formation, Processing, and Resolution of Recombination Intermediates. , 2008, Genome dynamics and stability.

[15]  J. Sweasy,et al.  The Leu22Pro tumor-associated variant of DNA polymerase beta is dRP lyase deficient , 2007, Nucleic acids research.

[16]  J. Sweasy,et al.  The E295K DNA Polymerase Beta Gastric Cancer-Associated Variant Interferes with Base Excision Repair and Induces Cellular Transformation , 2007, Molecular and Cellular Biology.

[17]  K. Eckert,et al.  Prostate-cancer-associated I260M variant of DNA polymerase beta is a sequence-specific mutator. , 2005, Biochemistry.

[18]  J. Sweasy,et al.  Expression of DNA polymerase {beta} cancer-associated variants in mouse cells results in cellular transformation. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[19]  Tomas Lindahl,et al.  Repair and genetic consequences of endogenous DNA base damage in mammalian cells. , 2004, Annual review of genetics.

[20]  Samuel H. Wilson,et al.  AP endonuclease-independent DNA base excision repair in human cells. , 2004, Molecular cell.

[21]  J. Sweasy,et al.  Is There a Link Between DNA Polymerase Beta and Cancer? , 2004, Cell cycle.

[22]  J. Sweasy,et al.  A DNA polymerase β mutant from colon cancer cells induces mutations , 2004 .

[23]  J. Pollard,et al.  Regulation of meiotic recombination and prophase I progression in mammals , 2001, BioEssays : news and reviews in molecular, cellular and developmental biology.

[24]  T. Mukai,et al.  Functional mutation of DNA polymerase beta found in human gastric cancer--inability of the base excision repair in vitro. , 1999, Mutation research.

[25]  P. Glazer,et al.  The Tyr-265-to-Cys mutator mutant of DNA polymerase beta induces a mutator phenotype in mouse LN12 cells. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[26]  D. S. Katz,et al.  Catalytic center of DNA polymerase beta for excision of deoxyribose phosphate groups. , 1998, Biochemistry.

[27]  K. Eckert,et al.  The mutator form of polymerase beta with amino acid substitution at tyrosine 265 in the hinge region displays an increase in both base substitution and frame shift errors. , 1998, Biochemistry.

[28]  Roeder Gs Meiotic chromosomes: it takes two to tango , 1997 .

[29]  B. Preston,et al.  A genetic system to identify DNA polymerase β mutator mutants , 1997 .

[30]  J. Sweasy,et al.  Evidence for a role for DNA polymerase β in mammalian meiosis , 1997 .

[31]  Y. Matsumoto,et al.  Excision of deoxyribose phosphate residues by DNA polymerase beta during DNA repair. , 1995, Science.

[32]  L. Loeb,et al.  Detection and characterization of mammalian DNA polymerase beta mutants by functional complementation in Escherichia coli. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[33]  Liming Wang,et al.  DNA Polymerase β Mutations in Human Colorectal Cancer , 1992 .

[34]  L. Loeb,et al.  Mammalian DNA polymerase beta can substitute for DNA polymerase I during DNA replication in Escherichia coli. , 1992, The Journal of biological chemistry.

[35]  J. Sweasy,et al.  Novel SOS phenotypes caused by second-site mutations in the recA430 gene of Escherichia coli. , 1991, Biochimie.

[36]  J. Sweasy,et al.  RecA protein of Escherichia coli has a third essential role in SOS mutator activity , 1990, Journal of bacteriology.

[37]  M. Yamaguchi,et al.  Difference in the expression level of DNA polymerase beta among mouse tissues: high expression in the pachytene spermatocyte. , 1989, Experimental cell research.

[38]  A. Fornace,et al.  Characterization of DNA polymerase beta mRNA: cell-cycle and growth response in cultured human cells. , 1988, Nucleic acids research.

[39]  S. H. Wilson,et al.  Expression of human DNA polymerase beta in Escherichia coli and characterization of the recombinant enzyme. , 1988, Biochemistry.

[40]  J. Sweasy,et al.  Recovery from ultraviolet light-induced inhibition of DNA synthesis requires umuDC gene products in recA718 mutant strains but not in recA+ strains of Escherichia coli. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[41]  L. Chang,et al.  Low molecular weight deoxyribonucleic acid polymerase from rabbit bone marrow. , 1972, Biochemistry.

[42]  S. Keeney Spo11 and the Formation of DNA Double-Strand Breaks in Meiosis. , 2008, Genome dynamics and stability.

[43]  C. Friedberg Errol,et al.  DNA Repair and Mutagenesis, Second Edition , 2006 .

[44]  E. Friedberg,et al.  DNA Repair and Mutagenesis , 2006 .

[45]  J. Capp,et al.  DNA polymerase beta overexpression stimulates the Rad51-dependent homologous recombination in mammalian cells. , 2004, Nucleic acids research.

[46]  J. Sweasy,et al.  A DNA polymerase beta mutant from colon cancer cells induces mutations. , 2004, Proceedings of the National Academy of Sciences of the United States of America.

[47]  Samuel H. Wilson,et al.  Mammalian DNA β-polymerase in base excision repair of alkylation damage , 2001 .

[48]  S. H. Wilson,et al.  Mammalian DNA beta-polymerase in base excision repair of alkylation damage. , 2001, Progress in nucleic acid research and molecular biology.

[49]  J. Sweasy,et al.  Evidence for a role for DNA polymerase beta in mammalian meiosis. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[50]  G. Roeder Meiotic chromosomes: it takes two to tango. , 1997, Genes & development.

[51]  B. Preston,et al.  A genetic system to identify DNA polymerase beta mutator mutants. , 1997, Proceedings of the National Academy of Sciences of the United States of America.

[52]  S. Banerjee,et al.  DNA polymerase beta mutations in human colorectal cancer. , 1992, Cancer research.