Automated "disease/no disease" grading of age-related macular degeneration by an image mining approach.

PURPOSE To describe and evaluate an automated grading system for age-related macular degeneration (AMD) by color fundus photography. METHODS An automated "disease/no disease" grading system for AMD was developed based on image-mining techniques. First, image preprocessing was performed to normalize color and nonuniform illumination of the fundus images to define a region of interest and to identify and remove pixels belonging to retinal vessels. To represent images for the prediction task, a graph-based image representation using quadtrees was then adopted. Next, a graph-mining technique was applied to the generated graphs to extract relevant features (in the form of frequent subgraphs) from images of both AMD and healthy volunteers. Features of the training data were then fed into a classifier generator for training purposes before employing the trained classifiers to classify new "unseen" images. RESULTS The algorithm was evaluated on two publically available fundus-image datasets comprising 258 images (160 AMD and 98 normal). Ten-fold cross validation was used. The experiments produced a best specificity of 100% and a best sensitivity of 99.4% with an overall accuracy of 99.6%. Our approach outperformed previous approaches reported in the literature. CONCLUSIONS This study has demonstrated a proof-of-concept, image-mining technique for automated AMD grading. This technique has the potential to be further developed as an automated grading tool for future whole-scale AMD screening programs.

[1]  E. Chaum,et al.  AUTOMATED DIAGNOSIS OF RETINOPATHY BY CONTENT-BASED IMAGE RETRIEVAL , 2008, Retina.

[2]  Chih-Jen Lin,et al.  LIBLINEAR: A Library for Large Linear Classification , 2008, J. Mach. Learn. Res..

[3]  Adam W. Hoover,et al.  Drusen Detection in a Retinal Image Using Multi-level Analysis , 2003, MICCAI.

[4]  Roberto Marcondes Cesar Junior,et al.  Retinal vessel segmentation using the 2-D Gabor wavelet and supervised classification , 2005, IEEE Transactions on Medical Imaging.

[5]  Enrico Grisan,et al.  Luminosity and contrast normalization in retinal images , 2005, Medical Image Anal..

[6]  Uğur Şevik,et al.  Automatic segmentation of age-related macular degeneration in retinal fundus images , 2008, Comput. Biol. Medicine.

[7]  Chih-Jen Lin,et al.  LIBSVM: A library for support vector machines , 2011, TIST.

[8]  Rafael C. González,et al.  Local Determination of a Moving Contrast Edge , 1985, IEEE Transactions on Pattern Analysis and Machine Intelligence.

[9]  Michalis E. Zervakis,et al.  Detection and segmentation of drusen deposits on human retina: Potential in the diagnosis of age-related macular degeneration , 2003, Medical Image Anal..

[10]  Joseph A. Izatt,et al.  Automatic segmentation of seven retinal layers in SDOCT images congruent with expert manual segmentation , 2010, Optics express.

[11]  Sina Farsiu,et al.  Quantitative comparison of drusen segmented on SD-OCT versus drusen delineated on color fundus photographs. , 2010, Investigative ophthalmology & visual science.

[12]  Frans Coenen,et al.  Corpus callosum MR image classification , 2010, Knowl. Based Syst..

[13]  Frans Coenen,et al.  Image Classification Using Histograms and Time Series Analysis: A Study of Age-Related Macular Degeneration Screening in Retinal Image Data , 2010, ICDM.

[14]  Ja Wilson,et al.  Principles and practice of screening for disease , 1968 .

[15]  Matthew D. Davis,et al.  The Age-Related Eye Disease Study Severity Scale for Age-Related Macular Degeneration , 2015 .

[16]  Paul Mitchell,et al.  Impact of early and late age-related macular degeneration on vision-specific functioning , 2010, British Journal of Ophthalmology.

[17]  G. Coscas,et al.  A new approach of geodesic reconstruction for drusen segmentation in eye fundus images , 2001, IEEE Transactions on Medical Imaging.

[18]  N. Buderer,et al.  Statistical methodology: I. Incorporating the prevalence of disease into the sample size calculation for sensitivity and specificity. , 1996, Academic emergency medicine : official journal of the Society for Academic Emergency Medicine.

[19]  Frans Coenen,et al.  Data mining techniques for the screening of age-related macular degeneration , 2012, Knowl. Based Syst..

[20]  J. Olson,et al.  The evidence for automated grading in diabetic retinopathy screening. , 2011, Current diabetes reviews.

[21]  Usha Chakravarthy,et al.  Ranibizumab versus bevacizumab to treat neovascular age-related macular degeneration: one-year findings from the IVAN randomized trial. , 2012, Ophthalmology.

[22]  Paul S. Heckbert,et al.  Graphics gems IV , 1994 .

[23]  Ian H. Witten,et al.  Data mining: practical machine learning tools and techniques, 3rd Edition , 1999 .

[24]  Victor Murray,et al.  Automatic detection of diabetic retinopathy and age-related macular degeneration in digital fundus images. , 2011, Investigative ophthalmology & visual science.

[25]  R. Newcombe Two-sided confidence intervals for the single proportion: comparison of seven methods. , 1998, Statistics in medicine.

[26]  J. Schuman,et al.  Optical coherence tomography. , 2000, Science.

[27]  Marios S. Pattichis,et al.  Multi-scale AM-FM for lesion phenotyping on age-related macular degeneration , 2009, 2009 22nd IEEE International Symposium on Computer-Based Medical Systems.

[28]  Victor Murray,et al.  Automatic Computer-Based Grading for Age-Related Maculopathy , 2010 .

[29]  Cemal Köse,et al.  A Statistical Segmentation Method for Measuring Age-Related Macular Degeneration in Retinal Fundus Images , 2010, Journal of Medical Systems.

[30]  A D Négrel,et al.  2002 Global update of available data on visual impairment: a compilation of population-based prevalence studies , 2004, Ophthalmic epidemiology.

[31]  Meindert Niemeijer,et al.  Automated detection of diabetic retinopathy: barriers to translation into clinical practice , 2010, Expert review of medical devices.

[32]  Steffen Schmitz-Valckenberg,et al.  Atlas of fundus autofluorescence imaging , 2007 .

[33]  Frans Coenen,et al.  Retinal image classification using a histogram based approach , 2010, The 2010 International Joint Conference on Neural Networks (IJCNN).

[34]  อนิรุธ สืบสิงห์,et al.  Data Mining Practical Machine Learning Tools and Techniques , 2014 .

[35]  B. Lujan,et al.  Spectral domain optical coherence tomography imaging of drusen in nonexudative age-related macular degeneration. , 2011, Ophthalmology.

[36]  Karel J. Zuiderveld,et al.  Contrast Limited Adaptive Histogram Equalization , 1994, Graphics Gems.

[37]  Sina Farsiu,et al.  Validated automatic segmentation of AMD pathology including drusen and geographic atrophy in SD-OCT images. , 2012, Investigative ophthalmology & visual science.

[38]  Frans Coenen,et al.  Graph-based Image Classification by Weighting Scheme , 2008, SGAI Conf..

[39]  U Chakravarthy,et al.  A preliminary model-based assessment of the cost-utility of a screening programme for early age-related macular degeneration. , 2008, Health technology assessment.

[40]  J. Vander,et al.  The Age-Related Eye Disease Study Severity Scale for Age-Related Macular Degeneration: AREDS Report No 17 , 2006 .

[41]  Pedro M. Domingos,et al.  On the Optimality of the Simple Bayesian Classifier under Zero-One Loss , 1997, Machine Learning.

[42]  Hanan Samet,et al.  The Quadtree and Related Hierarchical Data Structures , 1984, CSUR.

[43]  J. Saaddine,et al.  Forecasting age-related macular degeneration through the year 2050: the potential impact of new treatments. , 2009, Archives of ophthalmology.

[44]  Chih-Jen Lin,et al.  Feature Ranking Using Linear SVM , 2008, WCCI Causation and Prediction Challenge.