Rapid, specific and sensitive molecular detection assay for Alternaria helianthi that causes leaf blight disease in sunflower

[1]  G. H. Palmer Barley and Malt , 2017 .

[2]  H. Meena,et al.  Alternaria Blight: A Chronic Disease in Sunflower , 2014 .

[3]  I. González,et al.  ITS-based detection and quantification of Alternaria spp. in raw and processed vegetables by real-time quantitative PCR. , 2012, Food microbiology.

[4]  O. Lund,et al.  Specific PCR-based detection of Alternaria helianthi: the cause of blight and leaf spot in sunflower , 2012, Archives of Microbiology.

[5]  A. M. Pastrana,et al.  Molecular Tools for Detection of Plant Pathogenic Fungi and Fungicide Resistance , 2012 .

[6]  S. Klosterman,et al.  A real-time PCR assay for detection and quantification of Verticillium dahliae in spinach seed. , 2012, Phytopathology.

[7]  R. Westerman,et al.  Discovery of single‐nucleotide polymorphisms (SNPs) in the uncharacterized genome of the ascomycete Ophiognomonia clavigignenti‐juglandacearum from 454 sequence data , 2011, Molecular ecology resources.

[8]  Anu Sharma,et al.  Quantitative real-time PCR assay for rapid detection of plant and human pathogenic Macrophomina phaseolina from field and environmental samples , 2011, Mycologia.

[9]  Soo-Chul Park,et al.  Sensitive and Specific Detection of Xanthomonas oryzae pv. oryzae by Real-Time Bio-PCR Using Pathovar-Specific Primers Based on an rhs Family Gene. , 2011, Plant disease.

[10]  T. García,et al.  PCR detection of Alternaria spp. in processed foods, based on the internal transcribed spacer genetic marker. , 2011, Journal of food protection.

[11]  A. Saxena,et al.  Real-time PCR Assay Based on Topoisomerase-II Gene for Detection of Fusarium udum , 2011, Mycopathologia.

[12]  Srinath K. Rao,et al.  Effect of Alternaria helianthi culture filtrate on callus and regeneration of plantlets from tolerant callus in sunflower (Helianthus annuus L.). , 2010 .

[13]  G. C. M. van Leeuwen,et al.  A real‐time (TaqMan) PCR assay to differentiate Monilinia fructicola from other brown rot fungi of fruit crops , 2009 .

[14]  M. Rep,et al.  Evolutionary relationships between Fusarium oxysporum f. sp. lycopersici and F. oxysporum f. sp. radicis-lycopersici isolates inferred from mating type, elongation factor-1alpha and exopolygalacturonase sequences. , 2009, Mycological research.

[15]  R. Ioos,et al.  Sensitive detection of Fusarium circinatum in pine seed by combining an enrichment procedure with a real-time polymerase chain reaction using dual-labeled probe chemistry. , 2009, Phytopathology.

[16]  Neil Boonham,et al.  Development of protocols for detection of Colletotrichum acutatum and monitoring of strawberry anthracnose using real‐time PCR , 2009 .

[17]  K. Seifert,et al.  Description and DNA barcoding of three new species of Leohumicola from South Africa and the United States , 2008, Persoonia.

[18]  R. Raposo,et al.  A biomarker for the identification of four Phaeoacremonium species using the β-tubulin gene as the target sequence , 2008, Applied Microbiology and Biotechnology.

[19]  H. B. Patil,et al.  Association of new fungal species with leaf spot and blight of sunflower and cloning of their ribosomal RNA genes. , 2008 .

[20]  Jos Houbraken,et al.  Prospects for fungus identification using CO1 DNA barcodes, with Penicillium as a test case , 2007, Proceedings of the National Academy of Sciences.

[21]  A. Logrieco,et al.  Development of a quantitative real-time PCR assay for the detection of Aspergillus carbonarius in grapes. , 2006, International journal of food microbiology.

[22]  R. Frederick,et al.  Real-Time Fluorescent Polymerase Chain Reaction Detection of Phytophthora ramorum and Phytophthora pseudosyringae Using Mitochondrial Gene Regions. , 2006, Phytopathology.

[23]  A. Haikara,et al.  Real-time PCR for Quantification of Toxigenic Fusarium Species in Barley and Malt , 2006, European Journal of Plant Pathology.

[24]  P. Crous,et al.  Taxonomy and Pathology of Togninia (Diaporthales) and its Phaeoacremonium Anamorphs , 2006 .

[25]  T. Guillemette,et al.  Conventional and Real-Time PCR-Based Assay for Detecting Pathogenic Alternaria brassicae in Cruciferous Seed. , 2004, Plant disease.

[26]  T. Tsuge,et al.  Phologeny of Alternaria fungi known to produce host-specific toxins on the basis of variation in internal transcribed spacers of ribosomal DNA , 1995, Current Genetics.

[27]  F. Martin,et al.  Phylogenetic relationships among Phytophthora species inferred from sequence analysis of mitochondrially encoded cytochrome oxidase I and II genes , 2003, Mycologia.

[28]  P. Simoneau,et al.  Development of a PCR-based diagnostic assay for detecting pathogenic Alternaria species in cruciferous seeds. , 2002 .

[29]  P. Bonants,et al.  Development of specific primers for detection and identification of Alternaria spp. in carrot material by PCR and comparison with blotter and plating assays , 2002 .

[30]  C. Lévesque Molecular methods for detection of plant pathogens—What is the future? , 2001 .

[31]  P. Dyer,et al.  A multiplex PCR test for determination of mating type applied to the plant pathogens Tapesia yallundae and Tapesia acuformis. , 2001, Fungal genetics and biology : FG & B.

[32]  R. Gilbertson,et al.  A PCR-based Assay for Detection of Alternaria radicina on Carrot Seed. , 2001, Plant disease.

[33]  C. Alabouvette,et al.  Ribosomal DNA-targeted oligonucleotide probe and PCR assay specific for Fusarium oxysporum , 2000 .

[34]  S Rozen,et al.  Primer3 on the WWW for general users and for biologist programmers. , 2000, Methods in molecular biology.

[35]  G. Séguin-Swartz,et al.  Comparison of nuclear ribosomal DNA sequences from Alternaria species pathogenic to crucifers. , 1995 .

[36]  J. Thompson,et al.  CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. , 1994, Nucleic acids research.

[37]  P. Goodwin,et al.  Pathotype identification of Leptosphaeria maculans with PCR and oligonucleotide primers from ribosomal internal transcribed spacer sequences , 1992 .

[38]  T. White Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics , 1990 .

[39]  J. G. Raut Location of Alternaria helianthi in sunflower seed and its transmission from seed to plant. , 1985 .

[40]  S. Kolte,et al.  Effect of different intensities of Alternaria blight on yield and oil content of sunflower , 1980, The Journal of Agricultural Science.

[41]  R. Srivastava Two New Species of Phoma from India , 1979, Mykosen.

[42]  C. Hansford Contributions towards the fungus flora of Uganda. V. Fungi imperfecti. , 1943 .