Identification, Molecular Cloning, and Characterization of the Sixth Subunit of Human Transcription Factor TFIIIC*

TFIIIC in yeast and humans is required for transcription of tRNA and 5 S RNA genes by RNA polymerase III. In the yeast Saccharomyces cerevisiae, TFIIIC is composed of six subunits, five of which are conserved in humans. We report the identification, molecular cloning, and characterization of the sixth subunit of human TFIIIC, TFIIIC35, which is related to the smallest subunit of yeast TFIIIC. Human TFIIIC35 does not contain the phosphoglycerate mutase domain of its yeast counterpart, and these two proteins display only limited homology within a 34-amino acid domain. Homologs of the sixth TFIIIC subunit are also identified in other eukaryotes, and their phylogenic evolution is analyzed. Affinity-purified human TFIIIC from an epitope-tagged TFIIIC35 cell line is active in binding to and in transcription of the VA1 gene in vitro. Furthermore, TFIIIC35 specifically interacts with the human TFIIIC subunits TFIIIC63 and, to a lesser extent, TFIIIC90 in vitro. Finally, we determined a limited region in the smallest subunit of yeast TFIIIC that is sufficient for interacting with the yeast TFIIIC subunit ScTfc1 (orthologous to TFIIIC63) and found it to be adjacent to and overlap the 34-amino acid domain that is conserved from yeast to humans.

[1]  Ying Huang,et al.  Comparison of the RNA polymerase III transcription machinery in Schizosaccharomyces pombe, Saccharomyces cerevisiae and human. , 2001, Nucleic acids research.

[2]  Z. Wang,et al.  TFIIIC1 acts through a downstream region to stabilize TFIIIC2 binding to RNA polymerase III promoters , 1996, Molecular and cellular biology.

[3]  R. Roeder,et al.  Cloning and characterization of an evolutionarily divergent DNA-binding subunit of mammalian TFIIIC , 1994, Molecular and cellular biology.

[4]  I. Willis,et al.  A mutation in the second largest subunit of TFIIIC increases a rate-limiting step in transcription by RNA polymerase III , 1994, Molecular and cellular biology.

[5]  P. Thuriaux,et al.  τ91, an Essential Subunit of Yeast Transcription Factor IIIC, Cooperates with τ138 in DNA Binding , 1998, Molecular and Cellular Biology.

[6]  I. Willis,et al.  Interactions between the Tetratricopeptide Repeat-containing Transcription Factor TFIIIC131 and Its Ligand, TFIIIB70 , 2000, The Journal of Biological Chemistry.

[7]  R. Roeder,et al.  The TFIIIC90 Subunit of TFIIIC Interacts with Multiple Components of the RNA Polymerase III Machinery and Contains a Histone-Specific Acetyltransferase Activity , 1999, Molecular and Cellular Biology.

[8]  E. Geiduschek,et al.  The subunit structure of Saccharomyces cerevisiae transcription factor IIIC probed with a novel photocrosslinking reagent. , 1990, The EMBO journal.

[9]  Bernard Dujon,et al.  Hemiascomycetous yeasts at the forefront of comparative genomics. , 2005, Current opinion in genetics & development.

[10]  R. Roeder,et al.  Transcription Factor (TF)-like Nuclear Regulator, the 250-kDa Form of Homo sapiens TFIIIB″, Is an Essential Component of Human TFIIIC1 Activity* , 2004, Journal of Biological Chemistry.

[11]  A. Berk,et al.  Separation of TFIIIC into two functional components by sequence specific DNA affinity chromatography. , 1987, Nucleic acids research.

[12]  B. Chait,et al.  Human TATA-binding protein-related factor-2 (hTRF2) stably associates with hTFIIA in HeLa cells. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[13]  C. Carles,et al.  TFC3: gene encoding the B-block binding subunit of the yeast transcription factor IIIC. , 1992, Proceedings of the National Academy of Sciences of the United States of America.

[14]  Thomas L. Madden,et al.  Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements. , 2001, Nucleic acids research.

[15]  J. Acker,et al.  Multiple Roles of the τ131 Subunit of Yeast Transcription Factor IIIC (TFIIIC) in TFIIIB Assembly , 2002, Molecular and Cellular Biology.

[16]  A. Berk,et al.  Resolution of human transcription factor TFIIIC into two functional components. , 1987, Proceedings of the National Academy of Sciences of the United States of America.

[17]  N. Hernandez,et al.  Recruitment of RNA polymerase III to its target promoters. , 2002, Genes & development.

[18]  P. Legrain,et al.  Toward a functional analysis of the yeast genome through exhaustive two-hybrid screens , 1997, Nature Genetics.

[19]  K. H. Wolfe,et al.  Molecular evidence for an ancient duplication of the entire yeast genome , 1997, Nature.

[20]  C. Carles,et al.  Isolation of TFC1, a gene encoding one of two DNA-binding subunits of yeast transcription factor tau (TFIIIC). , 1991, Proceedings of the National Academy of Sciences of the United States of America.

[21]  A. Sentenac,et al.  A suppressor of mutations in the class III transcription system encodes a component of yeast TFIIIB. , 1996, The EMBO journal.

[22]  B. Brophy,et al.  Conserved functional domains of the RNA polymerase III general transcription factor BRF. , 1994, Genes & development.

[23]  Z. Wang,et al.  DNA topoisomerase I and PC4 can interact with human TFIIIC to promote both accurate termination and transcription reinitiation by RNA polymerase III. , 1998, Molecular cell.

[24]  Z. Wang,et al.  Cloning and characterization of a TFIIIC2 subunit (TFIIIC beta) whose presence correlates with activation of RNA polymerase III-mediated transcription by adenovirus E1A expression and serum factors. , 1995, Genes & development.

[25]  C. Carles,et al.  The TFIIIB-assembling subunit of yeast transcription factor TFIIIC has both tetratricopeptide repeats and basic helix-loop-helix motifs. , 1993, Proceedings of the National Academy of Sciences of the United States of America.

[26]  A. Berk,et al.  Purification and characterization of transcription factor IIIC2. , 1989, The Journal of biological chemistry.

[27]  A. Sentenac,et al.  Selective proteolysis defines two DNA binding domains in yeast transcription factor τ , 1986, Nature.

[28]  B. Buffin-Meyer,et al.  Detection of modifications in the glucose metabolism induced by genetic mutations in Saccharomyces cerevisiae by 13C- and H-NMR spectroscopy. , 2000, European journal of biochemistry.

[29]  M. C. Parsons,et al.  Cloning of TFC1, the Saccharomyces cerevisiae gene encoding the 95-kDa subunit of transcription factor TFIIIC. , 1992, The Journal of biological chemistry.

[30]  A. Sentenac,et al.  A Subunit of Yeast TFIIIC Participates in the Recruitment of TATA-Binding Protein , 1999, Molecular and Cellular Biology.

[31]  R. Aebersold,et al.  Human transcription factor IIIC box B binding subunit. , 1994, Proceedings of the National Academy of Sciences of the United States of America.

[32]  J. Acker,et al.  Structure of the τ60/Δτ91 Subcomplex of Yeast Transcription Factor IIIC: Insights into Preinitiation Complex Assembly , 2006 .

[33]  A. Sentenac,et al.  On the subunit composition, stoichiometry, and phosphorylation of the yeast transcription factor TFIIIC/tau. , 1993, The Journal of biological chemistry.

[34]  B. Barrell,et al.  The genome sequence of Schizosaccharomyces pombe , 2002, Nature.

[35]  N. Hernandez,et al.  Different human TFIIIB activities direct RNA polymerase III transcription from TATA-containing and TATA-less promoters. , 2000, Genes & development.

[36]  E. Geiduschek,et al.  Two components of Saccharomyces cerevisiae transcription factor IIIB (TFIIIB) are stereospecifically located upstream of a tRNA gene and interact with the second-largest subunit of TFIIIC , 1991, Molecular and cellular biology.

[37]  A. Sentenac,et al.  Complex Interactions between Yeast TFIIIB and TFIIIC (*) , 1995, The Journal of Biological Chemistry.

[38]  I. Willis,et al.  A tetratricopeptide repeat mutation in yeast transcription factor IIIC131 (TFIIIC131) facilitates recruitment of TFIIB-related factor TFIIIB70 , 1997, Molecular and cellular biology.

[39]  A. Sentenac,et al.  A Chimeric Subunit of Yeast Transcription Factor IIIC Forms a Subcomplex with τ95 , 1998, Molecular and Cellular Biology.

[40]  A. Sentenac,et al.  Interaction between Yeast RNA Polymerase III and Transcription Factor TFIIIC via ABC10α and τ131 Subunits* , 1999, The Journal of Biological Chemistry.

[41]  R. Roeder,et al.  Cloning and Characterization of Two Evolutionarily Conserved Subunits (TFIIIC102 and TFIIIC63) of Human TFIIIC and Their Involvement in Functional Interactions with TFIIIB and RNA Polymerase III , 1999, Molecular and Cellular Biology.

[42]  B. Dujon Yeasts illustrate the molecular mechanisms of eukaryotic genome evolution. , 2006, Trends in genetics : TIG.

[43]  K. Seifart,et al.  Physical separation of two different forms of human TFIIIB active in the transcription of the U6 or the VAI gene in vitro. , 1995, The EMBO journal.

[44]  P. Thuriaux,et al.  A protein-protein interaction map of yeast RNA polymerase III. , 1999, Proceedings of the National Academy of Sciences of the United States of America.

[45]  E. Geiduschek,et al.  The RNA polymerase III transcription apparatus. , 2001, Journal of molecular biology.

[46]  R. Roeder,et al.  Purification and characterization of two forms of human transcription factor IIIC. , 1992, The Journal of biological chemistry.

[47]  J. Acker,et al.  Reconstitution of the Yeast RNA Polymerase III Transcription System with All Recombinant Factors* , 2006, Journal of Biological Chemistry.

[48]  J. Acker,et al.  The τ95 Subunit of Yeast TFIIIC Influences Upstream and Downstream Functions of TFIIIC·DNA Complexes* , 2003, The Journal of Biological Chemistry.

[49]  Z. Wang,et al.  A stable complex of a novel transcription factor IIB- related factor, human TFIIIB50, and associated proteins mediate selective transcription by RNA polymerase III of genes with upstream promoter elements. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[50]  E. Geiduschek,et al.  Topography of transcription factor complexes on the Saccharomyces cerevisiae 5 S RNA gene. , 1992, Journal of molecular biology.

[51]  K. Seifart,et al.  Human transcription factors IIIC2 , IIIC1 and a novel component IIIC0 fulfil different aspects of DNA binding to various pol III genes. , 1997, Nucleic acids research.