Pattern and timing of diversification of the mammalian order Carnivora inferred from multiple nuclear gene sequences.
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S. O’Brien | W. Murphy | R. Wayne | W. Johnson | E. Eizirik | K. Koepfli | J. Dragoo | Klaus‐Peter Koepfli
[1] Ziheng Yang,et al. The Timetree of Life , 2010 .
[2] J. Sato,et al. Deciphering and dating the red panda's ancestry and early adaptive radiation of Musteloidea. , 2009, Molecular phylogenetics and evolution.
[3] A. Couloux,et al. Molecular phylogeny of the Herpestidae (Mammalia, Carnivora) with a special emphasis on the Asian Herpestes. , 2009, Molecular phylogenetics and evolution.
[4] F. Zachos. Handbook of the Mammals of the World , 2009 .
[5] W. H. Flower. On the Value of the Characters of the Base of the Cranium in the Classification of the Order Carnivora, and on the Systematic Position of Bassaris and other disputed Forms , 2009 .
[6] S. O’Brien,et al. Chromosome painting shows that skunks (Mephitidae, Carnivora) have highly rearranged karyotypes , 2008, Chromosome Research.
[7] R. Wayne,et al. Multigene phylogeny of the Mustelidae: Resolving relationships, tempo and biogeographic history of a mammalian adaptive radiation , 2008, BMC Biology.
[8] Axel Janke,et al. Mitogenomic analyses of caniform relationships. , 2007, Molecular phylogenetics and evolution.
[9] Tom H. Pringle,et al. Molecular and Genomic Data Identify the Closest Living Relative of Primates , 2007, Science.
[10] Klaus-Peter Koepfli,et al. Phylogeny of the Procyonidae (Mammalia: Carnivora): molecules, morphology and the Great American Interchange. , 2007, Molecular phylogenetics and evolution.
[11] P. Gaubert,et al. Phylogenetic systematics and tempo of evolution of the Viverrinae (Mammalia, Carnivora, Viverridae) within feliformians: implications for faunal exchanges between Asia and Africa. , 2006, Molecular phylogenetics and evolution.
[12] N. Lehman,et al. Pinniped phylogeny and a new hypothesis for their origin and dispersal. , 2006, Molecular phylogenetics and evolution.
[13] T. Fulton,et al. Molecular phylogeny of the Arctoidea (Carnivora): effect of missing data on supertree and supermatrix analyses of multiple gene data sets. , 2006, Molecular phylogenetics and evolution.
[14] D. Prothero. After the Dinosaurs: The Age of Mammals , 2006 .
[15] N. Rosenberg,et al. Discordance of Species Trees with Their Most Likely Gene Trees , 2006, PLoS genetics.
[16] Ya-ping Zhang,et al. Phylogeny of the caniform carnivora: evidence from multiple genes , 2006, Genetica.
[17] R. Wayne,et al. Molecular systematics of the Hyaenidae: relationships of a relictual lineage resolved by a molecular supermatrix. , 2006, Molecular phylogenetics and evolution.
[18] Mari Kobayashi,et al. Evidence from Nuclear DNA Sequences Sheds Light on the Phylogenetic Relationships of Pinnipedia: Single Origin with Affinity to Musteloidea , 2006, Zoological science.
[19] Agostinho Antunes,et al. The Late Miocene Radiation of Modern Felidae: A Genetic Assessment , 2006, Science.
[20] James A. Cuff,et al. Genome sequence, comparative analysis and haplotype structure of the domestic dog , 2005, Nature.
[21] P. Gaubert,et al. Mosaics of convergences and noise in morphological phylogenies: what's in a viverrid-like carnivoran? , 2005, Systematic biology.
[22] C. Strobeck,et al. A phylogeny of the Caniformia (order Carnivora) based on 12 complete protein-coding mitochondrial genes. , 2005, Molecular phylogenetics and evolution.
[23] J. J. Flynn,et al. Molecular phylogeny of the carnivora (mammalia): assessing the impact of increased sampling on resolving enigmatic relationships. , 2005, Systematic biology.
[24] O. Ryder,et al. Phylogenetic relationships within mammalian order Carnivora indicated by sequences of two nuclear DNA genes. , 2004, Molecular phylogenetics and evolution.
[25] Michael P. Cummings,et al. PAUP* [Phylogenetic Analysis Using Parsimony (and Other Methods)] , 2004 .
[26] J. Sato,et al. Molecular Phylogeny of Arctoids (Mammalia: Carnivora) with Emphasis on Phylogenetic and Taxonomic Positions of the Ferret-badgers and Skunks , 2004, Zoological science.
[27] P. Gaubert,et al. Exhaustive sample set among Viverridae reveals the sister-group of felids: the linsangs as a case of extreme morphological convergence within Feliformia , 2003, Proceedings of the Royal Society of London. Series B: Biological Sciences.
[28] S. Carroll,et al. Genome-scale approaches to resolving incongruence in molecular phylogenies , 2003, Nature.
[29] R. Wayne,et al. Type I STS markers are more informative than cytochrome B in phylogenetic reconstruction of the Mustelidae (Mammalia: Carnivora). , 2003, Systematic biology.
[30] O. Gascuel,et al. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. , 2003, Systematic biology.
[31] Klaus-Peter Koepfli,et al. A new phylogenetic marker, apolipoprotein B, provides compelling evidence for eutherian relationships. , 2003, Molecular phylogenetics and evolution.
[32] James M. Pflug,et al. Molecular systematics of armadillos (Xenarthra, Dasypodidae): contribution of maximum likelihood and Bayesian analyses of mitochondrial and nuclear genes. , 2003, Molecular phylogenetics and evolution.
[33] A. Yoder,et al. Single origin of Malagasy Carnivora from an African ancestor , 2003, Nature.
[34] S. O’Brien,et al. Placental mammal diversification and the Cretaceous–Tertiary boundary , 2003, Proceedings of the National Academy of Sciences of the United States of America.
[35] A. Lemmon,et al. The metapopulation genetic algorithm: An efficient solution for the problem of large phylogeny estimation , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[36] L. J. Anthony. The New Encyclopedia of Mammals , 2002 .
[37] W. Murphy,et al. Resolution of the Early Placental Mammal Radiation Using Bayesian Phylogenetics , 2001, Science.
[38] John P. Huelsenbeck,et al. MRBAYES: Bayesian inference of phylogenetic trees , 2001, Bioinform..
[39] P. Lio’,et al. Molecular phylogenetics: state-of-the-art methods for looking into the past. , 2001, Trends in genetics : TIG.
[40] W. Bruno,et al. Performance of a divergence time estimation method under a probabilistic model of rate evolution. , 2001, Molecular biology and evolution.
[41] S. O’Brien,et al. Molecular dating and biogeography of the early placental mammal radiation. , 2001, The Journal of heredity.
[42] S. O’Brien,et al. Molecular phylogenetics and the origins of placental mammals , 2001, Nature.
[43] Heather M. Amrine,et al. Mitochondrial versus nuclear gene sequences in deep-level mammalian phylogeny reconstruction. , 2001, Molecular biology and evolution.
[44] J. Sambrook,et al. Molecular Cloning: A Laboratory Manual , 2001 .
[45] J. J. Flynn,et al. Whence the red panda? , 2000, Molecular phylogenetics and evolution.
[46] Hidetoshi Shimodaira,et al. Multiple Comparisons of Log-Likelihoods with Applications to Phylogenetic Inference , 1999, Molecular Biology and Evolution.
[47] J. L. Gittleman,et al. Building large trees by combining phylogenetic information: a complete phylogeny of the extant Carnivora (Mammalia) , 1999, Biological reviews of the Cambridge Philosophical Society.
[48] S. O’Brien,et al. Development of a feline whole genome radiation hybrid panel and comparative mapping of human chromosome 12 and 22 loci. , 1999, Genomics.
[49] H. Kishino,et al. Estimating the rate of evolution of the rate of molecular evolution. , 1998, Molecular biology and evolution.
[50] J. J. Flynn,et al. Phylogeny of the Carnivora (Mammalia): congruence vs incompatibility among multiple data sets. , 1998, Molecular phylogenetics and evolution.
[51] J. Thompson,et al. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. , 1997, Nucleic acids research.
[52] R. Honeycutt,et al. Systematics of Mustelid-Like Carnivores , 1997 .
[53] G. Brewer,et al. Gene-specific universal mammalian sequence-tagged sites: Application to the canine genome , 1996, Biochemical Genetics.
[54] M. Wolsan. Phylogeny and classification of early European Mustelida (Mammalia: Carnivora) , 1993 .
[55] Daryl E. Wilson,et al. Mammal species of the world , 1993 .
[56] J. L. Gittleman. Carnivore Behavior, Ecology, and Evolution , 1989, Springer US.
[57] N. Saitou,et al. The neighbor-joining method: a new method for reconstructing phylogenetic trees. , 1987, Molecular biology and evolution.
[58] B. Kurtén. A molecular solution to the riddle of the giant panda's phylogeny , 1985, Nature.
[59] S. O’Brien,et al. A molecular solution to the riddle of the giant panda's phylogeny , 1985, Nature.
[60] Sudhir Kumar,et al. The timetree of life , 2009 .
[61] J. Gatesy,et al. The supermatrix approach to systematics. , 2007, Trends in ecology & evolution.
[62] S. O’Brien,et al. Designing and optimizing comparative anchor primers for comparative gene mapping and phylogenetic inference , 2007, Nature Protocols.
[63] Graziano Pesole,et al. BMC Evolutionary Biology BioMed Central , 2007 .
[64] J. Archibald,et al. The rise of placental mammals : origins and relationships of the Major Extant Clades , 2005 .
[65] S. O’Brien,et al. Molecular Phylogeny and Dating of Early Primate Divergences , 2004 .
[66] Callum F. Ross,et al. Anthropoid origins : new visions , 2004 .
[67] S. Lucas. Mammoths, Sabertooths, and Hominids: 65 Million Years of Mammalian Evolution in Europe , 2002 .
[68] D. Swofford. PAUP*: Phylogenetic analysis using parsimony (*and other methods), Version 4.0b10 , 2002 .
[69] D. Macdonald. New encyclopedia of mammals , 2001 .
[70] J. L. Gittleman,et al. "References" for Carnivore Conservation , 2001 .
[71] M. P. Cummings,et al. PAUP* Phylogenetic analysis using parsimony (*and other methods) Version 4 , 2000 .
[72] George Gaylord Simpson,et al. Classification of mammals : above the species level , 1997 .
[73] T. F. Laughlin,et al. Comparative anchor tagged sequences (CATS) for integrative mapping of mammalian genomes , 1997, Nature Genetics.
[74] S. O’Brien,et al. Molecular and Biochemical Evolution of the Carnivora , 1989 .
[75] W. C. Wozencraft. The Phylogeny of the Recent Carnivora , 1989 .
[76] R. M. Hunt. Evolution of the aeluroid Carnivora. Significance of auditory structure in the nimravid cat Dinictis. American Museum novitates ; no. 2886 , 1987 .
[77] J. Honacki,et al. Mammal species of the world : a taxonomic and geographic reference , 1982 .
[78] R. Nowak,et al. Walker's mammals of the world , 1968 .