The dsRNA binding protein family: critical roles, diverse cellular functions
暂无分享,去创建一个
[1] V. Ambros,et al. The C. elegans heterochronic gene lin-4 encodes small RNAs with antisense complementarity to lin-14 , 1993, Cell.
[2] R. Silverman,et al. Blockage of NF-kappa B signaling by selective ablation of an mRNA target by 2-5A antisense chimeras. , 1994, Science.
[3] I. London,et al. Regulation of protein synthesis: activation by double-stranded RNA of a protein kinase that phosphorylates eukaryotic initiation factor 2. , 1978, Proceedings of the National Academy of Sciences of the United States of America.
[4] D. Frendewey,et al. Purification and characterization of the Pac1 ribonuclease of Schizosaccharomyces pombe. , 1996, Nucleic acids research.
[5] M. Mathews,et al. Activities of adenovirus virus-associated RNAs: purification and characterization of RNA binding proteins. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[6] B. Bass,et al. A Xenopus zinc finger protein that specifically binds dsRNA and RNA-DNA hybrids. , 1997, Journal of molecular biology.
[7] B. Jacobs,et al. Inhibitory activity for the interferon-induced protein kinase is associated with the reovirus serotype 1 sigma 3 protein. , 1988, Proceedings of the National Academy of Sciences of the United States of America.
[8] P. Kao,et al. Purification by DNA affinity chromatography of two polypeptides that contact the NF-AT DNA binding site in the interleukin 2 promoter. , 1994, The Journal of biological chemistry.
[9] T. Hunt,et al. The characteristics of inhibition of protein synthesis by double-stranded ribonucleic acid in reticulocyte lysates. , 1975, The Journal of biological chemistry.
[10] S. Silverstein,et al. The reovirus replicative cycle. , 1976, Annual Review of Biochemistry.
[11] C. Samuel,et al. Expression and regulation by interferon of a double-stranded-RNA-specific adenosine deaminase from human cells: evidence for two forms of the deaminase , 1995, Molecular and cellular biology.
[12] P. Seeburg,et al. A mammalian RNA editing enzyme , 1996, Nature.
[13] A. Chatterjee,et al. Statistical Modelling and phylogenetic Analysis of a Deaminase Domain , 1998, J. Comput. Biol..
[14] K. Nishikura,et al. A third member of the RNA-specific adenosine deaminase gene family, ADAR3, contains both single- and double-stranded RNA binding domains. , 2000, RNA.
[15] S. Tutton,et al. Specific Double-Stranded RNA Interference in Undifferentiated Mouse Embryonic Stem Cells , 2001, Molecular and Cellular Biology.
[16] I. Mian,et al. A Z-DNA binding domain present in the human editing enzyme, double-stranded RNA adenosine deaminase. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[17] N. Seeman,et al. Sequence-specific Recognition of Double Helical Nucleic Acids by Proteins (base Pairs/hydrogen Bonding/recognition Fidelity/ion Binding) , 2022 .
[18] C. Samuel,et al. Mechanism of interferon action: double-stranded RNA-specific adenosine deaminase from human cells is inducible by alpha and gamma interferons. , 1995, Virology.
[19] M. Seldin,et al. Human/mouse homology relationships. , 1996, Genomics.
[20] F. Fuller-Pace,et al. The highly related DEAD box RNA helicases p68 and p72 exist as heterodimers in cells. , 2003, Nucleic acids research.
[21] Louise Wickham,et al. Mammalian Staufen Is a Double-Stranded-RNA- and Tubulin-Binding Protein Which Localizes to the Rough Endoplasmic Reticulum , 1999, Molecular and Cellular Biology.
[22] U. Scheffer,et al. Mode of action of the anti-AIDS compound poly(I).poly(C12U) (Ampligen): activator of 2',5'-oligoadenylate synthetase and double-stranded RNA-dependent kinase. , 1993, Journal of interferon research.
[23] M. Jantsch,et al. The human but not the Xenopus RNA-editing enzyme ADAR1 has an atypical nuclear localization signal and displays the characteristics of a shuttling protein. , 2001, Molecular biology of the cell.
[24] Aseem Kumar,et al. Double-stranded RNA-dependent protein kinase activates transcription factor NF-kappa B by phosphorylating I kappa B. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[25] K. Nishikura,et al. Editing of glutamate receptor B subunit ion channel RNAs by four alternatively spliced DRADA2 double-stranded RNA adenosine deaminases , 1997, Molecular and cellular biology.
[26] Donald Court,et al. 5 – RNA Processing and Degradation by RNase III , 1993 .
[27] D. Hudson,et al. Analysis of arginine-rich peptides from the HIV Tat protein reveals unusual features of RNA-protein recognition. , 1991, Genes & development.
[28] Jeffrey D. Parvin,et al. RNA Helicase A Mediates Association of CBP with RNA Polymerase II , 1997, Cell.
[29] B. Williams,et al. Structure of the double‐stranded RNA‐binding domain of the protein kinase PKR reveals the molecular basis of its dsRNA‐mediated activation , 1998, The EMBO journal.
[30] M. Perkus,et al. Reversal of the interferon-sensitive phenotype of a vaccinia virus lacking E3L by expression of the reovirus S4 gene , 1995, Journal of virology.
[31] Brenda L. Bass,et al. RNA editing of hepatitis delta virus antigenome by dsRNA-adenosine deaminase , 1996, Nature.
[32] R. I. Glazer,et al. Effects of fibroblast and recombinant leukocyte interferons and double-stranded RNA on ppp(2'-5')An synthesis and cell proliferation in human colon carcinoma cells in vitro. , 1983, Cancer research.
[33] D. Rose,et al. A role for RNA helicase A in post-transcriptional regulation of HIV type 1. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[34] H D Robertson,et al. Purification and properties of ribonuclease III from Escherichia coli. , 1968, The Journal of biological chemistry.
[35] C. Mello,et al. The dsRNA Binding Protein RDE-4 Interacts with RDE-1, DCR-1, and a DExH-Box Helicase to Direct RNAi in C. elegans , 2002, Cell.
[36] Tyson V. Sharp,et al. The vaccinia virus E3L gene product interacts with both the regulatory and the substrate binding regions of PKR: implications for PKR autoregulation. , 1998, Virology.
[37] M. Mathews,et al. Proteins binding to duplexed RNA: one motif, multiple functions. , 2000, Trends in biochemical sciences.
[38] John J. Holland,et al. Vesicular stomatitis virus defective interfering particles can contain extensive genomic sequence rearrangements and base substitutions , 1984, Cell.
[39] P. Kao,et al. Nuclear factor-90 of activated T-cells: A double-stranded RNA-binding protein and substrate for the double-stranded RNA-dependent protein kinase, PKR. , 1999, Biochemistry.
[40] J. Langland,et al. Products of the porcine group C rotavirus NSP3 gene bind specifically to double-stranded RNA and inhibit activation of the interferon-induced protein kinase PKR , 1994, Journal of virology.
[41] D. St Johnston,et al. Distinct roles of two conserved Staufen domains in oskar mRNA localization and translation , 2000, The EMBO journal.
[42] B. Bass,et al. Binding properties of newly identified Xenopus proteins containing dsRNA-binding motifs , 1994, Current Biology.
[43] S. Iuchi,et al. Three classes of C2H2 zinc finger proteins , 2001, Cellular and Molecular Life Sciences CMLS.
[44] Chao-Kuen Lai,et al. Transcription Repression of Human Hepatitis B Virus Genes by Negative Regulatory Element-binding Protein/SON* , 2001, The Journal of Biological Chemistry.
[45] S. Antonarakis,et al. Localization of a novel human RNA-editing deaminase (hRED2 or ADARB2) to chromosome 10p15 , 1997, Human Genetics.
[46] K. Manova,et al. RNA helicase A is essential for normal gastrulation. , 1998, Proceedings of the National Academy of Sciences of the United States of America.
[47] F. van der Wilk,et al. Characteristics of acyrthosiphon pisum virus, a newly identified virus infecting the pea aphid. , 1997, Journal of invertebrate pathology.
[48] L. DesGroseillers,et al. Localization of a human double-stranded RNA-binding protein gene (STAU) to band 20q13.1 by fluorescence in situ hybridization. , 1996, Genomics.
[49] A. Nicholson,et al. Intrinsic double-stranded-RNA processing activity of Escherichia coli ribonuclease III lacking the dsRNA-binding domain. , 2001, Biochemistry.
[50] M. Hilleman,et al. Inducers of interferon and host resistance. 3. Double-stranded RNA from reovirus type 3 virions (reo 3-RNA). , 1967, Proceedings of the National Academy of Sciences of the United States of America.
[51] M. Paupard,et al. Patterns of developmental expression of the RNA editing enzyme rADAR2 , 1999, Neuroscience.
[52] G. Guellaen,et al. Expression of the TAR RNA binding protein in human testis. , 2001, Molecular human reproduction.
[53] K. Ozato,et al. Heterologous dimerization domains functionally substitute for the double‐stranded RNA binding domains of the kinase PKR , 2001, The EMBO journal.
[54] N. Sonenberg,et al. Double-stranded-RNA-dependent protein kinase and TAR RNA-binding protein form homo- and heterodimers in vivo. , 1995, Proceedings of the National Academy of Sciences of the United States of America.
[55] G. Sen,et al. PACT, a protein activator of the interferon‐induced protein kinase, PKR , 1998, The EMBO journal.
[56] A. Pasquinelli,et al. Genes and Mechanisms Related to RNA Interference Regulate Expression of the Small Temporal RNAs that Control C. elegans Developmental Timing , 2001, Cell.
[57] C. Dehio,et al. Identification of plant genetic loci involved in a posttranscriptional mechanism for meiotically reversible transgene silencing. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[58] K. Gardiner,et al. Map location, genomic organization and expression patterns of the human RED1 RNA editase , 1997, Somatic cell and molecular genetics.
[59] B. Berkhout,et al. Characterization of a human TAR RNA-binding protein that activates the HIV-1 LTR. , 1991, Science.
[60] Fengqin Gao,et al. Ceramide Regulates Protein Synthesis by a Novel Mechanism Involving the Cellular PKR Activator RAX* , 2001, The Journal of Biological Chemistry.
[61] A. Pasquinelli,et al. A Cellular Function for the RNA-Interference Enzyme Dicer in the Maturation of the let-7 Small Temporal RNA , 2001, Science.
[62] I. Macara,et al. Exportin-5, a novel karyopherin, mediates nuclear export of double-stranded RNA binding proteins , 2002, The Journal of cell biology.
[63] A. Panet. Regulation of the antiviral and anticellular activities of interferon by exogenous double-stranded RNA , 2004, Molecular and Cellular Biochemistry.
[64] Dirk Feldmeyer,et al. Early-Onset Epilepsy and Postnatal Lethality Associated with an Editing-Deficient GluR-B Allele in Mice , 1995, Science.
[65] F. Grosse,et al. Nucleolar localization of murine nuclear DNA helicase II (RNA helicase A). , 1999, Journal of cell science.
[66] Suzanne Cheng,et al. GART, SON, IFNAR, and CRF2-4 genes cluster on human Chromosome 21 and mouse Chromosome 16 , 2004, Mammalian Genome.
[67] A. Hinnebusch,et al. Binding of Double-stranded RNA to Protein Kinase PKR Is Required for Dimerization and Promotes Critical Autophosphorylation Events in the Activation Loop* , 2001, The Journal of Biological Chemistry.
[68] I. Kerr,et al. Interferon-mediated, double-stranded RNA-dependent protein kinase is inhibited in extracts from vaccinia virus-infected cells , 1984, Journal of virology.
[69] M. Iordanov,et al. Activation of NF-κB by Double-Stranded RNA (dsRNA) in the Absence of Protein Kinase R and RNase L Demonstrates the Existence of Two Separate dsRNA-Triggered Antiviral Programs , 2001, Molecular and Cellular Biology.
[70] Steven P. Gygi,et al. Comprehensive proteomic analysis of the human spliceosome , 2002, Nature.
[71] A. Nicholson,et al. Mechanism of action of Escherichia coli ribonuclease III. Stringent chemical requirement for the glutamic acid 117 side chain and Mn2+ rescue of the Glu117Asp mutant. , 2001, Biochemistry.
[72] M. Kuroda,et al. RNA‐dependent association of the Drosophila maleless protein with the male X chromosome , 1996, Genes to cells : devoted to molecular & cellular mechanisms.
[73] T. Mak,et al. Activation of the dsRNA‐dependent protein kinase, PKR, induces apoptosis through FADD‐mediated death signaling , 1998, The EMBO journal.
[74] H. Atkins,et al. Characterization of Transgenic Mice with Targeted Disruption of the Catalytic Domain of the Double-stranded RNA-dependent Protein Kinase, PKR* , 1999, The Journal of Biological Chemistry.
[75] K. Jeang,et al. Characterization of TRBP1 and TRBP2. Stable stem-loop structure at the 5' end of TRBP2 mRNA resembles HIV-1 TAR and is not found in its processed pseudogene. , 2000, Journal of biomedical science.
[76] Karyn N. Johnson,et al. The novel genome organization of the insect picorna-like virus Drosophila C virus suggests this virus belongs to a previously undescribed virus family. , 1998, The Journal of general virology.
[77] K. Nishikura,et al. Genomic organization and chromosomal location of the human dsRNA adenosine deaminase gene: the enzyme for glutamate-activated ion channel RNA editing. , 1995, Journal of molecular biology.
[78] M. Kiebler,et al. Microtubule-dependent recruitment of Staufen-green fluorescent protein into large RNA-containing granules and subsequent dendritic transport in living hippocampal neurons. , 1999, Molecular biology of the cell.
[79] K. Nishikura,et al. Mutagenic Analysis of Double-stranded RNA Adenosine Deaminase, a Candidate Enzyme for RNA Editing of Glutamate-gated Ion Channel Transcripts (*) , 1995, The Journal of Biological Chemistry.
[80] Dominique Ferrandon,et al. Staufen protein associates with the 3′UTR of bicoid mRNA to form particles that move in a microtubule-dependent manner , 1994, Cell.
[81] S. Sato,et al. Substrate recognition by ADAR1 and ADAR2. , 2001, RNA.
[82] Alexander Rich,et al. Structure of the DLM-1–Z-DNA complex reveals a conserved family of Z-DNA-binding proteins , 2018, Nature Structural Biology.
[83] P. Seeburg,et al. RNA editing of AMPA receptor subunit GluR-B: A base-paired intron-exon structure determines position and efficiency , 1993, Cell.
[84] I. London,et al. Inhibition of protein synthesis in rabbit reticulocyte lysates by double-stranded RNA and oxidized glutathione: indirect mode of action on polypeptide chain initiation. , 1975, Proceedings of the National Academy of Sciences of the United States of America.
[85] M. Katze,et al. Malignant transformation by a mutant of the IFN-inducible dsRNA-dependent protein kinase. , 1992, Science.
[86] R. Braun,et al. Requirement for the Murine Zinc Finger Protein ZFR in Perigastrulation Growth and Survival , 2001, Molecular and Cellular Biology.
[87] Madhur Kumar,et al. Nuclear antisense RNA induces extensive adenosine modifications and nuclear retention of target transcripts. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[88] M. Katze. Regulation of the interferon-induced PKR: can viruses cope? , 1995, Trends in microbiology.
[89] Xinghai Li,et al. B56-Associated Protein Phosphatase 2A Is Required For Survival and Protects from Apoptosis in Drosophila melanogaster , 2002, Molecular and Cellular Biology.
[90] E. Evguenieva-Hackenberg,et al. Both N‐terminal catalytic and C‐terminal RNA binding domain contribute to substrate specificity and cleavage site selection of RNase III , 2001, FEBS letters.
[91] P. Gruss,et al. Mice deficient for spermatid perinuclear RNA-binding protein show neurologic, spermatogenic, and sperm morphological abnormalities. , 2001, Developmental biology.
[92] N. Duchange,et al. Alternative splicing in the human interleukin enhancer binding factor 3 (ILF3) gene. , 2000, Gene.
[93] M. Jantsch,et al. Xlrbpa, a Double-stranded RNA-binding Protein Associated with Ribosomes and Heterogeneous Nuclear RNPs , 1997, The Journal of cell biology.
[94] E. Paoletti,et al. TAR RNA-binding protein is an inhibitor of the interferon-induced protein kinase PKR. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[95] F. Grosse,et al. Domain Structure of Human Nuclear DNA Helicase II (RNA Helicase A)* , 1997, The Journal of Biological Chemistry.
[96] J. Casey. RNA Editing in Hepatitis Delta Virus Genotype III Requires a Branched Double-Hairpin RNA Structure , 2002, Journal of Virology.
[97] Robert H. Silverman,et al. Activation of p38 Mitogen-Activated Protein Kinase and c-Jun NH2-Terminal Kinase by Double-Stranded RNA and Encephalomyocarditis Virus: Involvement of RNase L, Protein Kinase R, and Alternative Pathways , 2000, Molecular and Cellular Biology.
[98] J. V. Van Etten,et al. Analysis of 43 kb of the Chlorella virus PBCV-1 330-kb genome: map positions 45 to 88. , 1995, Virology.
[99] A. Aguzzi,et al. Deficient signaling in mice devoid of double‐stranded RNA‐dependent protein kinase. , 1995, The EMBO journal.
[100] I. Kerr,et al. Molecular cloning and characterization of the human double-stranded RNA-activated protein kinase induced by interferon , 1990, Cell.
[101] M. Jantsch,et al. The double‐stranded RNA‐binding domains of Xenopus laevis ADAR1 exhibit different RNA‐binding behaviors , 1998, FEBS letters.
[102] D. Feldmeyer,et al. Point mutation in an AMPA receptor gene rescues lethality in mice deficient in the RNA-editing enzyme ADAR2 , 2000, Nature.
[103] B. Bass,et al. RNA hairpins in noncoding regions of human brain and Caenorhabditis elegans mRNA are edited by adenosine deaminases that act on RNA , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[104] L. Law,et al. Inhibition of tumor growth by polyinosinic-polycytidylic acid. , 1969, Proceedings of the National Academy of Sciences of the United States of America.
[105] C. Disteche,et al. Identification of ZFR, an ancient and highly conserved murine chromosome-associated zinc finger protein. , 1999, Gene.
[106] A. Fire,et al. Functional anatomy of a dsRNA trigger: differential requirement for the two trigger strands in RNA interference. , 2000, Molecular cell.
[107] K. Schappert,et al. Human p68 kinase exhibits growth suppression in yeast and homology to the translational regulator GCN2. , 1992, The EMBO journal.
[108] D. Apirion,et al. The synthesis of some proteins is affected in RNA processing mutants of Escherichia coli. , 1980, Biochemical and biophysical research communications.
[109] J. Parvin,et al. BRCA1 protein is linked to the RNA polymerase II holoenzyme complex via RNA helicase A , 1998, Nature Genetics.
[110] M. Karin,et al. JNK2 and IKKbeta are required for activating the innate response to viral infection. , 1999, Immunity.
[111] R. Reenan,et al. dADAR, a Drosophila double-stranded RNA-specific adenosine deaminase is highly developmentally regulated and is itself a target for RNA editing. , 2000, RNA.
[112] A. Hovanessian,et al. Autophosphorylation of the protein kinase dependent on double-stranded RNA. , 1987, The Journal of biological chemistry.
[113] P. Seeburg,et al. Cloning of a human RNA editing deaminase (ADARB1) of glutamate receptors that maps to chromosome 21q22.3. , 1997, Genomics.
[114] P. Zamore,et al. ATP Requirements and Small Interfering RNA Structure in the RNA Interference Pathway , 2001, Cell.
[115] N. Gupta,et al. Protein synthesis in rabbit reticulocytes. Purification and characterization of a double-stranded RNA-dependent protein synthesis inhibitor from reticulocyte lysates. , 1981, The Journal of biological chemistry.
[116] R. Fleischmann,et al. Whole-genome random sequencing and assembly of Haemophilus influenzae Rd. , 1995, Science.
[117] J. Dunn. RNase III cleavage of single-stranded RNA. Effect of ionic strength on the fideltiy of cleavage. , 1976, The Journal of biological chemistry.
[118] J. Hurwitz,et al. The Human RNA Helicase A (DDX9) Gene Maps to the Prostate Cancer Susceptibility Locus at Chromosome Band 1q25 and Its Pseudogene (DDX9P) to 13q22, Respectively , 1999, Somatic cell and molecular genetics.
[119] B. Bass,et al. RNA editing of hepatitis delta virus antigenome by dsRNA-adenosine deaminase , 1996, Nature.
[120] R. Braun,et al. A double-stranded RNA binding protein required for activation of repressed messages in mammalian germ cells , 1999, Nature Genetics.
[121] T. Tuschl,et al. RNA interference is mediated by 21- and 22-nucleotide RNAs. , 2001, Genes & development.
[122] B. Bass,et al. Analysis of Xenopus dsRNA adenosine deaminase cDNAs reveals similarities to DNA methyltransferases. , 1997, RNA.
[123] K. Oishi,et al. Maleless, a recessive autosomal mutant of Drosophila melanogaster that specifically kills male zygotes. , 1975, Genetics.
[124] B Tidor,et al. Arginine-mediated RNA recognition: the arginine fork , 1991, Science.
[125] R. Wek,et al. Inhibitory sequences in the N-terminus of the double-stranded-RNA-dependent protein kinase, PKR, are important for regulating phosphorylation of eukaryotic initiation factor 2alpha (eIF2alpha). , 2001, European journal of biochemistry.
[126] Alex Bateman,et al. The InterPro database, an integrated documentation resource for protein families, domains and functional sites , 2001, Nucleic Acids Res..
[127] J. Hurwitz,et al. A new RNA helicase isolated from HeLa cells that catalytically translocates in the 3' to 5' direction. , 1992, The Journal of biological chemistry.
[128] A. Caudy,et al. Role for a bidentate ribonuclease in the initiation step of RNA interference , 2001 .
[129] M. Gariglio,et al. Activation of Interferon-Inducible Genes in Mice by Poly rI:rC or Alloantigens , 1991, Journal of immunotherapy : official journal of the Society for Biological Therapy.
[130] Mingli Yang,et al. RAX, a Cellular Activator for Double-stranded RNA-dependent Protein Kinase during Stress Signaling* , 1999, The Journal of Biological Chemistry.
[131] K. Jeang,et al. Characterization of TRBP1 and TRBP2 , 2000, Journal of Biomedical Science.
[132] C. Hornyik,et al. A viral protein suppresses RNA silencing and binds silencing‐generated, 21‐ to 25‐nucleotide double‐stranded RNAs , 2002, The EMBO journal.
[133] A. Wargelius,et al. Double-stranded RNA induces specific developmental defects in zebrafish embryos. , 1999, Biochemical and biophysical research communications.
[134] B. Bass,et al. Deamination of mammalian glutamate receptor RNA by Xenopus dsRNA adenosine deaminase: similarities to in vivo RNA editing. , 1995, RNA.
[135] A W Nicholson,et al. Structure, reactivity, and biology of double-stranded RNA. , 1996, Progress in nucleic acid research and molecular biology.
[136] Patrick J. Paddison,et al. Stable suppression of gene expression by RNAi in mammalian cells , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[137] A. Nicholson,et al. Molecular characterization of a mouse cDNA encoding Dicer, a ribonuclease III ortholog involved in RNA interference , 2002, Mammalian Genome.
[138] F. Slack,et al. The lin-41 RBCC gene acts in the C. elegans heterochronic pathway between the let-7 regulatory RNA and the LIN-29 transcription factor. , 2000, Molecular cell.
[139] R. M. Marión,et al. A Human Sequence Homologue of Staufen Is an RNA-Binding Protein That Is Associated with Polysomes and Localizes to the Rough Endoplasmic Reticulum , 1999, Molecular and Cellular Biology.
[140] Shiyong Wu,et al. A Model for the Double-stranded RNA (dsRNA)-dependent Dimerization and Activation of the dsRNA-activated Protein Kinase PKR* , 1997, Journal of Biological Chemistry.
[141] J. G. Patton,et al. A new double-stranded RNA-binding protein that interacts with PKR. , 2000, Nucleic acids research.
[142] M. Higuchi,et al. Cloning of cDNAs encoding mammalian double-stranded RNA-specific adenosine deaminase , 1995, Molecular and cellular biology.
[143] R. Reenan,et al. A-to-I Pre-mRNA Editing in Drosophila Is Primarily Involved in Adult Nervous System Function and Integrity , 2000, Cell.
[144] M. Katze,et al. Tumor suppressor function of the interferon-induced double-stranded RNA-activated protein kinase. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[145] F. Grosse,et al. Purification and characterization of two DNA helicases from calf thymus nuclei. , 1991, The Journal of biological chemistry.
[146] D. Rhodes. Structural analysis of a triple complex between the histone octamer, a Xenopus gene for 5S RNA and transcription factor IIIA. , 1985, The EMBO journal.
[147] M. Yamamoto,et al. S. pombe pac1+, whose overexpression inhibits sexual development, encodes a ribonuclease III‐like RNase. , 1991, The EMBO journal.
[148] C. Smith,et al. Specific cleavage of hyper‐edited dsRNAs , 2001, The EMBO journal.
[149] J. Hurwitz,et al. Molecular analysis of the cDNA and genomic DNA encoding mouse RNA helicase A. , 1998, Genomics.
[150] M. Luo,et al. The Double-Stranded RNA-Binding Protein Staufen Is Incorporated in Human Immunodeficiency Virus Type 1: Evidence for a Role in Genomic RNA Encapsidation , 2000, Journal of Virology.
[151] D. Rock,et al. Genome of Lumpy Skin Disease Virus , 2001, Journal of Virology.
[152] C. Samuel,et al. Mechanism of interferon action: characterization of the intermolecular autophosphorylation of PKR, the interferon-inducible, RNA-dependent protein kinase , 1995, Journal of virology.
[153] J. Langland,et al. Reovirus σ3 Protein: dsRNA Binding and Inhibition of RNA-Activated Protein Kinase , 1998 .
[154] S. Jacobsen,et al. Disruption of an RNA helicase/RNAse III gene in Arabidopsis causes unregulated cell division in floral meristems. , 1999, Development.
[155] Yong Liu,et al. Functionally Distinct Double-stranded RNA-binding Domains Associated with Alternative Splice Site Variants of the Interferon-inducible Double-stranded RNA-specific Adenosine Deaminase* , 1997, The Journal of Biological Chemistry.
[156] B. Bass,et al. A Role for the RNase III Enzyme DCR-1 in RNA Interference and Germ Line Development in Caenorhabditis elegans , 2001, Science.
[157] F. Grosse,et al. Pre-mRNA and mRNA binding of human nuclear DNA helicase II (RNA helicase A). , 1999, Journal of cell science.
[158] Mitzi I. Kuroda,et al. Epigenetic Aspects of X-Chromosome Dosage Compensation , 2001, Science.
[159] Mingli Yang,et al. JAZ Requires the Double-stranded RNA-binding Zinc Finger Motifs for Nuclear Localization* , 1999, The Journal of Biological Chemistry.
[160] S. Der,et al. A double-stranded RNA-activated protein kinase-dependent pathway mediating stress-induced apoptosis. , 1997, Proceedings of the National Academy of Sciences of the United States of America.
[161] J. Hurwitz,et al. Human RNA helicase A is homologous to the maleless protein of Drosophila. , 1993, The Journal of biological chemistry.
[162] J. Krueger,et al. The role of double-stranded RNA in induction of the acute-phase response in an abortive influenza virus infection model. , 1992, The Journal of infectious diseases.
[163] B. Reinhart,et al. The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans , 2000, Nature.
[164] Ming-Bo Wang,et al. Gene silencing as an adaptive defence against viruses , 2001, Nature.
[165] R. Palmiter,et al. Protamine 3'-untranslated sequences regulate temporal translational control and subcellular localization of growth hormone in spermatids of transgenic mice. , 1989, Genes & development.
[166] R. Roeder,et al. Xenopus 5S gene transcription factor, TFIIIA: Characterization of a cDNA clone and measurement of RNA levels throughout development , 1984, Cell.
[167] B. Moss,et al. Nuclear localization of a double-stranded RNA-binding protein encoded by the vaccinia virus E3L gene. , 1993, Virology.
[168] C. Samuel,et al. PACT, a double-stranded RNA binding protein acts as a positive regulator for type I interferon gene induced by Newcastle disease virus. , 2001, Biochemical and biophysical research communications.
[169] M. Kiebler,et al. The Mammalian Staufen Protein Localizes to the Somatodendritic Domain of Cultured Hippocampal Neurons: Implications for Its Involvement in mRNA Transport , 1999, The Journal of Neuroscience.
[170] R. Emeson,et al. Regulation of serotonin-2C receptor G-protein coupling by RNA editing , 1997, Nature.
[171] M. Wigler,et al. A gene from S. pombe with homology to E. coli RNAse III blocks conjugation and sporulation when overexpressed in wild type cells. , 1990, Nucleic acids research.
[172] M. Jantsch,et al. Comparative Mutational Analysis of the Double-stranded RNA Binding Domains of Xenopus laevis RNA-binding Protein A* , 1996, The Journal of Biological Chemistry.
[173] B. Reinhart,et al. MicroRNAs in plants. , 2002, Genes & development.
[174] E. Moss,et al. Non-coding RNAs: Lightning strikes twice , 2000, Current Biology.
[175] M. Mann,et al. miRNPs: a novel class of ribonucleoproteins containing numerous microRNAs. , 2002, Genes & development.
[176] C. Méndez-Vidal,et al. The p53-induced mouse zinc finger protein wig-1 binds double-stranded RNA with high affinity. , 2002, Nucleic acids research.
[177] G. Peters,et al. Modular Structure of PACT: Distinct Domains for Binding and Activating PKR , 2001, Molecular and Cellular Biology.
[178] D. Strayer,et al. Mismatched double-stranded RNA, Ampligen (poly(I): poly(C12U), demonstrates antiviral and immunostimulatory activities in HIV disease. , 1991, International journal of immunopharmacology.
[179] J. Langland,et al. Double-stranded RNA is a trigger for apoptosis in vaccinia virus-infected cells , 1997, Journal of virology.
[180] M. Wilm,et al. Protein composition of human prespliceosomes isolated by a tobramycin affinity-selection method , 2002, Proceedings of the National Academy of Sciences of the United States of America.
[181] A. Hinnebusch,et al. Structural requirements for double-stranded RNA binding, dimerization, and activation of the human eIF-2 alpha kinase DAI in Saccharomyces cerevisiae , 1995, Molecular and cellular biology.
[182] R. Braun,et al. Spermatid perinuclear ribonucleic acid-binding protein binds microtubules in vitro and associates with abnormal manchettes in vivo in mice. , 1998, Biology of reproduction.
[183] E. De Clercq,et al. Increased susceptibility of cells treated with interferon to the toxicity of polyriboinosinic-polyribocytidylic acid. , 1972, Proceedings of the National Academy of Sciences of the United States of America.
[184] T. Tuschl,et al. Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells , 2001, Nature.
[185] M. Hagiwara,et al. Dual Roles of RNA Helicase A in CREB-Dependent Transcription , 2001, Molecular and Cellular Biology.
[186] R. Braun,et al. A testis cytoplasmic RNA-binding protein that has the properties of a translational repressor , 1996, Molecular and cellular biology.
[187] M. Katze,et al. Translational regulation by the interferon-induced double-stranded-RNA-activated 68-kDa protein kinase. , 1993, Proceedings of the National Academy of Sciences of the United States of America.
[188] S C Schultz,et al. Molecular basis of double‐stranded RNA‐protein interactions: structure of a dsRNA‐binding domain complexed with dsRNA , 1998, The EMBO journal.
[189] E. Paoletti,et al. Distinct patterns of IFN sensitivity observed in cells infected with vaccinia K3L- and E3L- mutant viruses. , 1995, Virology.
[190] A. Mayeda,et al. Characterization of Two Evolutionarily Conserved, Alternatively Spliced Nuclear Phosphoproteins, NFAR-1 and -2, That Function in mRNA Processing and Interact with the Double-stranded RNA-dependent Protein Kinase, PKR* , 2001, The Journal of Biological Chemistry.
[191] R. Charrel,et al. Comparative sequence analysis of American, European and Asian isolates of viruses in the genus Coltivirus. , 1998, The Journal of general virology.
[192] Magdalena Zernicka-Goetz,et al. Specific interference with gene function by double-stranded RNA in early mouse development , 2000, Nature Cell Biology.
[193] J. Hershey,et al. Stimulation of protein synthesis in COS cells transfected with variants of the alpha-subunit of initiation factor eIF-2. , 1992, The Journal of biological chemistry.
[194] E. A. Havell,et al. A role for tumor necrosis factor in poly(I:C)-induced hemorrhagic necrosis and T-cell-dependent regression of a murine sarcoma. , 1991, Journal of interferon research.
[195] F. Sicheri,et al. X-ray crystal structure and functional analysis of vaccinia virus K3L reveals molecular determinants for PKR subversion and substrate recognition. , 2002, Molecular cell.
[196] G. Barber,et al. The 90- and 110-kDa human NFAR proteins are translated from two differentially spliced mRNAs encoded on chromosome 19p13. , 2001, Genomics.
[197] S. Nanduri,et al. A dynamically tuned double‐stranded RNA binding mechanism for the activation of antiviral kinase PKR , 2000, The EMBO journal.
[198] A. Fire,et al. Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans , 1998, Nature.
[199] P. Seeburg,et al. RED2, a Brain-specific Member of the RNA-specific Adenosine Deaminase Family* , 1996, The Journal of Biological Chemistry.
[200] D. Feldmeyer,et al. Neurological dysfunctions in mice expressing different levels of the Q/R site–unedited AMPAR subunit GluR–B , 1999, Nature Neuroscience.
[201] D. St Johnston,et al. A conserved double-stranded RNA-binding domain. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[202] A Crane,et al. THE SUBMERGENCE OF WESTERN EUROPE PRIOR TO THE NEOLITHIC PERIOD. , 1895, Science.
[203] P. Seeburg,et al. Q/R site editing in kainate receptor GluR5 and GluR6 pre-mRNAs requires distant intronic sequences. , 1996, Proceedings of the National Academy of Sciences of the United States of America.
[204] M J Clemens,et al. The double-stranded RNA-dependent protein kinase PKR: structure and function. , 1997, Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research.
[205] R. Braun,et al. Spnr, a murine RNA-binding protein that is localized to cytoplasmic microtubules , 1995, The Journal of cell biology.
[206] Brenda L. Bass,et al. An unwinding activity that covalently modifies its double-stranded RNA substrate , 1988, Cell.
[207] R. Carthew,et al. Use of dsRNA-Mediated Genetic Interference to Demonstrate that frizzled and frizzled 2 Act in the Wingless Pathway , 1998, Cell.
[208] C. Samuel,et al. Human RNA-specific adenosine deaminase ADAR1 transcripts possess alternative exon 1 structures that initiate from different promoters, one constitutively active and the other interferon inducible. , 1999, Proceedings of the National Academy of Sciences of the United States of America.
[209] P. Lengyel,et al. Interferon action: two distinct pathways for inhibition of protein synthesis by double-stranded RNA. , 1978, Proceedings of the National Academy of Sciences of the United States of America.
[210] L. Miraglia,et al. Human RNase III Is a 160-kDa Protein Involved in Preribosomal RNA Processing* , 2000, The Journal of Biological Chemistry.
[211] W. Guo,et al. DRBP76, a Double-stranded RNA-binding Nuclear Protein, Is Phosphorylated by the Interferon-induced Protein Kinase, PKR* , 1999, The Journal of Biological Chemistry.
[212] K. Nishikura,et al. Requirement of the RNA editing deaminase ADAR1 gene for embryonic erythropoiesis. , 2000, Science.
[213] M. Carmell,et al. Posttranscriptional Gene Silencing in Plants , 2006 .
[214] M. W. Taylor,et al. Viruses as an aid to cancer therapy: regression of solid and ascites tumors in rodents after treatment with bovine enterovirus. , 1971, Proceedings of the National Academy of Sciences of the United States of America.
[215] Q. Wei,et al. RNAi as Random Degradative PCR siRNA Primers Convert mRNA into dsRNAs that Are Degraded to Generate New siRNAs , 2001, Cell.
[216] E. De Clercq,et al. Specificity of interferon-induced enhancement of toxicity for double-stranded ribonucleic acids. , 1973, The Journal of general virology.
[217] A. Kingsman,et al. TRIP: a novel double stranded RNA binding protein which interacts with the leucine rich repeat of flightless I. , 1998, Nucleic acids research.
[218] H. W. Chang,et al. The E3L gene of vaccinia virus encodes an inhibitor of the interferon-induced, double-stranded RNA-dependent protein kinase. , 1992, Proceedings of the National Academy of Sciences of the United States of America.
[219] C. Disteche,et al. Cloning and characterization of the mouse Interleukin Enhancer Binding Factor 3 (Ilf3) homolog in a screen for RNA binding proteins , 1999, Mammalian Genome.
[220] R. Braun,et al. Distribution of Tenr, an RNA-binding protein, in a lattice-like network within the spermatid nucleus in the mouse. , 1995, Biology of reproduction.
[221] M. Mann,et al. A Functional Interaction between the Survival Motor Neuron Complex and RNA Polymerase II , 2001, The Journal of cell biology.
[222] J. V. Van Etten,et al. Analysis of 76 kb of the chlorella virus PBCV-1 330-kb genome: map positions 182 to 258. , 1996, Virology.
[223] Daniel St Johnston,et al. staufen, a gene required to localize maternal RNAs in the Drosophila egg , 1991, Cell.
[224] B. S. Baker,et al. The maleless protein associates with the X chromosome to regulate dosage compensation in drosophila , 1991, Cell.
[225] O. Elroy-Stein,et al. Recombinant vaccinia virus K3L gene product prevents activation of double-stranded RNA-dependent, initiation factor 2 alpha-specific protein kinase. , 1993, The Journal of biological chemistry.
[226] N. Fedoroff,et al. A Mutation in the Arabidopsis HYL1 Gene Encoding a dsRNA Binding Protein Affects Responses to Abscisic Acid, Auxin, and Cytokinin , 2000, Plant Cell.
[227] Yong Liu,et al. Editing of Glutamate Receptor Subunit B Pre-mRNA by Splice-site Variants of Interferon-inducible Double-stranded RNA-specific Adenosine Deaminase ADAR1* , 1999, The Journal of Biological Chemistry.
[228] C. Hume,et al. A cDNA clone for a novel nuclear protein with DNA binding activity , 1992, Chromosoma.
[229] V. Solovyev,et al. A novel type of RNase III family proteins in eukaryotes. , 2000, Gene.
[230] Rekha C. Patel,et al. PACT, a Stress-modulated Cellular Activator of Interferon-induced Double-stranded RNA-activated Protein Kinase, PKR* , 2000, The Journal of Biological Chemistry.
[231] K. Nishikura,et al. Molecular cloning of cDNA for double-stranded RNA adenosine deaminase, a candidate enzyme for nuclear RNA editing. , 1994, Proceedings of the National Academy of Sciences of the United States of America.
[232] Q. Al-Awqati,et al. Kanadaptin Is a Protein That Interacts with the Kidney but Not the Erythroid Form of Band 3* , 1998, The Journal of Biological Chemistry.
[233] E. Paoletti,et al. Vaccinia virus-encoded elF-2α homolog abrogates the antiviral effect of interferon , 1991 .
[234] Roger E Bumgarner,et al. A Comprehensive View of Regulation of Gene Expression by Double-stranded RNA-mediated Cell Signaling* , 2001, The Journal of Biological Chemistry.
[235] M. Jantsch,et al. The RNA-editing Enzyme ADAR1 Is Localized to the Nascent Ribonucleoprotein Matrix on Xenopus Lampbrush Chromosomes but Specifically Associates with an Atypical Loop , 1999, The Journal of cell biology.
[236] B. Reinhart,et al. Conservation of the sequence and temporal expression of let-7 heterochronic regulatory RNA , 2000, Nature.
[237] J. Mattick,et al. The evolution of controlled multitasked gene networks: the role of introns and other noncoding RNAs in the development of complex organisms. , 2001, Molecular biology and evolution.
[238] P. Sharp,et al. RNAi Double-Stranded RNA Directs the ATP-Dependent Cleavage of mRNA at 21 to 23 Nucleotide Intervals , 2000, Cell.
[239] C. Samuel,et al. Proteolytic cleavage of the reovirus sigma 3 protein results in enhanced double-stranded RNA-binding activity: identification of a repeated basic amino acid motif within the C-terminal binding region , 1992, Journal of virology.
[240] A. Smith,et al. Cloning and expression of cyclosporin A- and FK506-sensitive nuclear factor of activated T-cells: NF45 and NF90. , 1994, The Journal of biological chemistry.
[241] R. Lehmann,et al. Drosophila development: Homeodomains and translational control , 1996, Current Biology.
[242] M. Billeter,et al. Biased hypermutation of viral RNA genomes could be due to unwinding/modification of double-stranded RNA , 1989, Cell.
[243] E. Paoletti,et al. Vaccinia virus-encoded eIF-2 alpha homolog abrogates the antiviral effect of interferon. , 1991, Virology.
[244] A. Fukamizu,et al. A Role of RNA Helicase A in cis-Acting Transactivation Response Element-mediated Transcriptional Regulation of Human Immunodeficiency Virus Type 1* , 2001, The Journal of Biological Chemistry.
[245] Julie Dawn Thompson,et al. Detection of dsRNA-binding domains in RNA helicase A and Drosophila maleless: implications for monomeric RNA helicases , 1994, Nucleic Acids Res..
[246] K. Jeang,et al. Genetic mapping in human and mouse of the locus encoding TRBP, a protein that binds the TAR region of the human immunodeficiency virus (HIV-1). , 1995, Genomics.
[247] R. Patient,et al. The Maternal CCAAT Box Transcription Factor Which Controls GATA-2 Expression Is Novel and Developmentally Regulated and Contains a Double-Stranded-RNA-Binding Subunit , 1998, Molecular and Cellular Biology.
[248] G. Kneale,et al. RNA‐dependent cytoplasmic anchoring of a transcription factor subunit during Xenopus development , 2000, The EMBO journal.
[249] M. Karin,et al. Nuclear export of NF90 is required for interleukin-2 mRNA stabilization. , 2002, Molecular cell.
[250] C. Nüsslein-Volhard,et al. Multiple steps in the localization of bicoid RNA to the anterior pole of the Drosophila oocyte. , 1989, Development.
[251] I. Nabi,et al. A Novel Murine Staufen Isoform Modulates the RNA Content of Staufen Complexes , 2000, Molecular and Cellular Biology.
[252] M. Mathews,et al. Interactions between double-stranded RNA regulators and the protein kinase DAI , 1992, Molecular and cellular biology.
[253] V. Ambros,et al. The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation. , 1999, Developmental biology.
[254] L. Schaade,et al. Cloning and expression of the human single copy homologue of the mouse zinc finger protein zfr. , 2001, Gene.
[255] R. Emeson,et al. Serotonin-2C Receptor Pre-mRNA Editing in Rat Brain andin Vitro by Splice Site Variants of the Interferon-inducible Double-stranded RNA-specific Adenosine Deaminase ADAR1* , 1999, The Journal of Biological Chemistry.
[256] P. Roberts,et al. Essential role for the dsRNA-dependent protein kinase PKR in innate immunity to viral infection. , 2000, Immunity.
[257] M. Mathews,et al. Functional characterization of the RNA-binding domain and motif of the double-stranded RNA-dependent protein kinase DAI (PKR). , 1995, Journal of molecular biology.
[258] H. W. Chang,et al. The E3L and K3L vaccinia virus gene products stimulate translation through inhibition of the double-stranded RNA-dependent protein kinase by different mechanisms , 1993, Journal of virology.
[259] Gabriele Varani,et al. RNA recognition by a Staufen double‐stranded RNA‐binding domain , 2000, The EMBO journal.
[260] C. Baglioni,et al. Structural requirements of double-stranded RNA for the activation of 2',5'-oligo(A) polymerase and protein kinase of interferon-treated HeLa cells. , 1979, The Journal of biological chemistry.
[261] H. W. Chang,et al. Identification of a conserved motif that is necessary for binding of the vaccinia virus E3L gene products to double-stranded RNA. , 1993, Virology.
[262] B. Bass,et al. Caenorhabditis elegans mRNAs that encode a protein similar to ADARs derive from an operon containing six genes. , 1999, Nucleic acids research.
[263] P. Seeburg,et al. Structural Requirements for RNA Editing in Glutamate Receptor Pre-mRNAs by Recombinant Double-stranded RNA Adenosine Deaminase (*) , 1996, The Journal of Biological Chemistry.
[264] R. Sperling,et al. RNA editing activity is associated with splicing factors in lnRNP particles: The nuclear pre-mRNA processing machinery , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[265] S. B. Lee,et al. The interferon-induced double-stranded RNA-activated protein kinase induces apoptosis. , 1994, Virology.
[266] M. Mathews,et al. Two RNA-binding motifs in the double-stranded RNA-activated protein kinase, DAI. , 1992, Genes & development.
[267] K. Jeang,et al. Oncogenic potential of TAR RNA binding protein TRBP and its regulatory interaction with RNA‐dependent protein kinase PKR , 1997, The EMBO journal.
[268] H. Das,et al. Protein Synthesis in Rabbit Reticulocytes , 1980 .
[269] M. Hilleman,et al. Inducers of interferon and host resistance. I. Double-stranded RNA from extracts of Penicillium funiculosum. , 1967, Proceedings of the National Academy of Sciences of the United States of America.
[270] S. B. Lee,et al. The interferon-induced double-stranded RNA-activated human p68 protein kinase inhibits the replication of vaccinia virus. , 1993, Virology.
[271] Y. Jan,et al. Staufen: a common component of mRNA transport in oocytes and neurons? , 2000, Trends in cell biology.
[272] B. Williams,et al. Deficient cytokine signaling in mouse embryo fibroblasts with a targeted deletion in the PKR gene: role of IRF‐1 and NF‐κB , 1997, The EMBO journal.
[273] W. Filipowicz,et al. Specific interference with gene expression induced by long, double-stranded RNA in mouse embryonal teratocarcinoma cell lines , 2001, Proceedings of the National Academy of Sciences of the United States of America.
[274] C. Xiao,et al. Signal- and importin-dependent nuclear targeting of the kidney anion exchanger 1-binding protein kanadaptin. , 2002, The Biochemical journal.
[275] P. Seeburg,et al. A standardized nomenclature for adenosine deaminases that act on RNA. , 1997, RNA.
[276] M. Kuroda,et al. The dosage compensation regulators MLE, MSL-1 and MSL-2 are interdependent since early embryogenesis in Drosophila , 1995, Mechanisms of Development.
[277] J. Vilček,et al. Mitogenic effect of double‐stranded RNA in human fibroblasts: Role of autogenous interferon , 1987, Journal of cellular physiology.