Distribution of the HLA‐DPB1 alleles in a Russian population living in the Chelyabinsk region (South Ural of Russia)

The purpose of this work was to establish the distribution of HLA‐DPB1 alleles in Russians living in the Chelyabinsk region (Russia). DPB1 frequencies were determined in 100 unrelated Russian, living in the Chelyabinsk region. All subjects were healthy unrelated blood donors, between 18 and 55 years of age. Typing was performed by NGS (DNA‐technology, Moscow). For population genetics analysis GENE[RATE] (https://hla-net.eu/tools/) software was used. DPB1*04:01 prevails in this population (gf = 0.3667). Other frequent HLA‐DPB1 alleles were: DPB1*04:02, DPB1*02:01, DPB1*03:01 (gf = 0.1490; 0.1481; 0.1385, respectively). Rare alleles (gf ≤ 0.03) were DPB1*17:01, DPB1*01:01, DPB1*06:01, DPB1*14:01, DPB1*05:01, DPB1*13:01, DPB1*09:01, DPB1*10:01, DPB1*11:01, DPB1*23:01, DPB1*124:01, DPB1*15:01, DPB1*16:01, DPB1*105:01, DPB1*150:01.

[1]  A. Nademanee,et al.  Protective Effect of HLA-DPB1 Mismatch Remains Valid in Reduced-Intensity Conditioning Unrelated Donor Hematopoietic Cell Transplantation , 2019, Bone Marrow Transplantation.

[2]  W. Cho,et al.  HLA alleles, especially amino-acid signatures of HLA-DPB1, might contribute to the molecular pathogenesis of early-onset autoimmune thyroid disease , 2019, PloS one.

[3]  T. Roberts,et al.  Genetics, Human Major Histocompatibility Complex (MHC) , 2019 .

[4]  J. Falkenburg,et al.  Dissecting Genetic Control of HLA-DPB1 Expression and Its Relation to Structural Mismatch Models in Hematopoietic Stem Cell Transplantation , 2018, Front. Immunol..

[5]  M. Ota,et al.  A cis-eQTL of HLA-DPB1 Affects Susceptibility to Type 1 Autoimmune Hepatitis , 2018, Scientific Reports.

[6]  Peiyuan Xia,et al.  Association between HLA-DP Gene Polymorphisms and Cervical Cancer Risk: A Meta-Analysis , 2018, BioMed research international.

[7]  A. Fontenot Immunologic Effects of Beryllium Exposure , 2018, Annals of the American Thoracic Society.

[8]  B. Cai,et al.  Genetic polymorphism of rs9277535 in HLA-DP associated with rheumatoid arthritis and anti-CCP production in a Chinese population , 2018, Clinical Rheumatology.

[9]  Effie W Petersdorf,et al.  Predicting an HLA-DPB1 expression marker based on standard DPB1 genotyping: Linkage analysis of over 32,000 samples. , 2018, Human immunology.

[10]  S. Fujieda,et al.  Association of Japanese cedar pollinosis and sensitization with HLA-DPB1 in the Japanese adolescent. , 2018, Allergology international : official journal of the Japanese Society of Allergology.

[11]  B. Shaw,et al.  HLA-DP in unrelated hematopoietic cell transplantation revisited: challenges and opportunities. , 2017, Blood.

[12]  Naoto Hirano,et al.  Identification of Functional and Expression Polymorphisms Associated With Risk for Antineutrophil Cytoplasmic Autoantibody–Associated Vasculitis , 2017, Arthritis & rheumatology.

[13]  E. Milford,et al.  Antibodies against HLA-DP recognize broadly expressed epitopes. , 2016, Human immunology.

[14]  M. Honda,et al.  Effects of HLA-DPB1 genotypes on chronic hepatitis B infection in Japanese individuals. , 2015, Tissue antigens.

[15]  Effie W Petersdorf,et al.  High HLA-DP Expression and Graft-versus-Host Disease. , 2015, The New England journal of medicine.

[16]  Martin Maiers,et al.  The impact of amino acid variability on alloreactivity defines a functional distance predictive of permissive HLA-DPB1 mismatches in hematopoietic stem cell transplantation. , 2015, Biology of blood and marrow transplantation : journal of the American Society for Blood and Marrow Transplantation.

[17]  J. M. Nunes Using uniformat and gene[rate] to Analyze Data with Ambiguities in Population Genetics , 2015, Evolutionary bioinformatics online.

[18]  Richard Apps,et al.  A Novel Variant Marking HLA-DP Expression Levels Predicts Recovery from Hepatitis B Virus Infection , 2012, Journal of Virology.

[19]  Effie W Petersdorf,et al.  Effect of T-cell-epitope matching at HLA-DPB1 in recipients of unrelated-donor haemopoietic-cell transplantation: a retrospective study. , 2012, The Lancet. Oncology.

[20]  A. Begovich,et al.  The importance of HLA-DPB1 in unrelated donor hematopoietic cell transplantation. , 2007, Blood.

[21]  Jar-How Lee,et al.  Detection of antibodies to HLA-DP in renal transplant recipients using single antigen beads. , 2005, Transplantation.

[22]  R. Wassmuth,et al.  Anti-HLA class II antibodies in kidney retransplant patients. , 2005, Tissue antigens.

[23]  Maria Pia Sormani,et al.  A T-cell epitope encoded by a subset of HLA-DPB1 alleles determines nonpermissive mismatches for hematologic stem cell transplantation. , 2003, Blood.

[24]  L. Newman,et al.  Beryllium presentation to CD4+ T cells underlies disease-susceptibility HLA-DP alleles in chronic beryllium disease. , 2000, Proceedings of the National Academy of Sciences of the United States of America.

[25]  J. Alexandrova,et al.  HLA class II molecular polymorphisms in healthy Slavic individuals from North-Western Russia. , 1999, Tissue antigens.

[26]  K. Welsh,et al.  The human major histocompatibility complex (MHC) , 1984 .