Verification of systems biology research in the age of collaborative competition

Collaborative competitions in which communities of researchers compete to solve challenges may facilitate more rigorous scrutiny of scientific results.

[1]  AC Tose.  Cell , 1993, Cell.

[2]  魏屹东,et al.  Scientometrics , 2018, Encyclopedia of Big Data.

[3]  J. Mesirov,et al.  Molecular classification of cancer: class discovery and class prediction by gene expression monitoring. , 1999, Science.

[4]  Bernard Rous,et al.  The ACM digital library , 2001, CACM.

[5]  John Moult,et al.  A decade of CASP: progress, bottlenecks and prognosis in protein structure prediction. , 2005, Current opinion in structural biology.

[6]  A. Califano,et al.  Dialogue on Reverse‐Engineering Assessment and Methods , 2007, Annals of the New York Academy of Sciences.

[7]  P. Bork,et al.  Systematic Discovery of In Vivo Phosphorylation Networks , 2007, Cell.

[8]  P. Donnelly,et al.  Replicating genotype–phenotype associations , 2007, Nature.

[9]  M. McCarthy,et al.  Genome-wide association studies for complex traits: consensus, uncertainty and challenges , 2008, Nature Reviews Genetics.

[10]  P. Bork,et al.  Linear Motif Atlas for Phosphorylation-Dependent Signaling , 2008, Science Signaling.

[11]  H. Wolinsky.  What's in a name? , 2008, EMBO reports.

[12]  Ruedi Aebersold,et al.  A mouse plasma peptide atlas as a resource for disease proteomics , 2008, Genome Biology.

[13]  A. Janetos.  A New Biology for the 21st Century , 2009 .

[14]  D. Bernardo,et al.  A Yeast Synthetic Network for In Vivo Assessment of Reverse-Engineering and Modeling Approaches , 2009, Cell.

[15]  R. Rosenfeld.  Nature , 2009, Otolaryngology--head and neck surgery : official journal of American Academy of Otolaryngology-Head and Neck Surgery.

[16]  Division on Earth.  A New Biology for the 21st Century , 2009 .

[17]  Dario Floreano,et al.  Generating Realistic In Silico Gene Networks for Performance Assessment of Reverse Engineering Methods , 2009, J. Comput. Biol..

[18]  N. D. Clarke,et al.  Towards a Rigorous Assessment of Systems Biology Models: The DREAM3 Challenges , 2010, PloS one.

[19]  Wei Keat Lim,et al.  The transcriptional network for mesenchymal transformation of brain tumors , 2009, Nature.

[20]  Wendy Filsell,et al.  What the papers say: Text mining for genomics and systems biology , 2010, Human Genomics.

[21]  D. Floreano,et al.  Revealing strengths and weaknesses of methods for gene network inference , 2010, Proceedings of the National Academy of Sciences.

[22]  U. Sauer,et al.  Automatic policing of biochemical annotations using genomic correlations , 2009, Nature chemical biology.

[23]  Peder Olesen Larsen,et al.  The rate of growth in scientific publication and the decline in coverage provided by Science Citation Index , 2010, Scientometrics.

[24]  R. Linding,et al.  Network‐based drugs and biomarkers , 2010, The Journal of pathology.

[25]  A. Mandavilli.  Peer review: Trial by Twitter , 2011, Nature.

[26]  J. Mesirov,et al.  Predicting relapse in patients with medulloblastoma by integrating evidence from clinical and genomic features. , 2011, Journal of clinical oncology : official journal of the American Society of Clinical Oncology.

[27]  Jim Leape,et al.  Invasives: a major conservation threat. , 2011, Science.

[28]  Christina L. Hennessey.  ACM Digital Library , 2012 .