Role of DNA sequence in chromatin remodeling and the formation of nucleosome-free regions
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Roger D Kornberg | B. Maier-Davis | R. Kornberg | Y. Lorch | Yahli Lorch | Barbara Maier-Davis | Barbara Maier-Davis
[1] P. Bork,et al. Functional organization of the yeast proteome by systematic analysis of protein complexes , 2002, Nature.
[2] Irene K. Moore,et al. The DNA-encoded nucleosome organization of a eukaryotic genome , 2009, Nature.
[3] J. Widom,et al. Sequence motifs and free energies of selected natural and non-natural nucleosome positioning DNA sequences. , 1999, Journal of molecular biology.
[4] U. Oechsner,et al. Reb1p-dependent DNA Bending Effects Nucleosome Positioning and Constitutive Transcription at the Yeast Profilin Promoter* , 2003, The Journal of Biological Chemistry.
[5] J Seth Strattan,et al. Nucleosomes unfold completely at a transcriptionally active promoter. , 2003, Molecular cell.
[6] Olivier Elemento,et al. Fast and systematic genome-wide discovery of conserved regulatory elements using a non-alignment based approach , 2005, Genome Biology.
[7] R. Kornberg,et al. Statistical positioning of nucleosomes by specific protein-binding to an upstream activating sequence in yeast. , 1988, Journal of molecular biology.
[8] Anjanabha Saha,et al. DNA translocation and nucleosome remodeling assays by the RSC chromatin remodeling complex. , 2004, Methods in enzymology.
[9] A. Prunell. Nucleosome reconstitution on plasmid‐inserted poly(dA) . poly(dT). , 1982, The EMBO journal.
[10] K. Struhl,et al. Determinants of nucleosome positioning , 2013, Nature Structural &Molecular Biology.
[11] B. Maier-Davis,et al. Chromatin remodeling by nucleosome disassembly in vitro. , 2006, Proceedings of the National Academy of Sciences of the United States of America.
[12] D. Chasman,et al. A yeast protein that influences the chromatin structure of UASG and functions as a powerful auxiliary gene activator. , 1990, Genes & development.
[13] S. Schreiber,et al. Histone Variant H2A.Z Marks the 5′ Ends of Both Active and Inactive Genes in Euchromatin , 2006, Cell.
[14] Randy Z. Wu,et al. Positioned and G/C-capped poly(dA:dT) tracts associate with the centers of nucleosome-free regions in yeast promoters. , 2010, Genome research.
[15] C. Peterson,et al. The RSC chromatin remodelling enzyme has a unique role in directing the accurate positioning of nucleosomes , 2011, The EMBO journal.
[16] H. Madhani,et al. Mechanisms that Specify Promoter Nucleosome Location and Identity , 2009, Cell.
[17] H. Drew,et al. Sequence periodicities in chicken nucleosome core DNA. , 1986, Journal of molecular biology.
[18] R. Kornberg,et al. Chromatin remodeling by DNA bending, not twisting. , 2005, Proceedings of the National Academy of Sciences of the United States of America.
[19] B. Maier-Davis,et al. Mechanism of chromatin remodeling , 2010, Proceedings of the National Academy of Sciences.
[20] R. Kornberg,et al. Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones , 1987, Cell.
[21] M. Grunstein,et al. Nucleosome loss activates yeast downstream promoters in vivo , 1988, Cell.
[22] J. Svaren,et al. Transcription factors vs nucleosomes: regulation of the PHO5 promoter in yeast. , 1997, Trends in biochemical sciences.
[23] V. Iyer,et al. Poly(dA:dT), a ubiquitous promoter element that stimulates transcription via its intrinsic DNA structure. , 1995, The EMBO journal.
[24] Kevin Struhl,et al. A functional evolutionary approach to identify determinants of nucleosome positioning: a unifying model for establishing the genome-wide pattern. , 2012, Molecular cell.
[25] Lani F. Wu,et al. Genome-Scale Identification of Nucleosome Positions in S. cerevisiae , 2005, Science.
[26] R. Kornberg,et al. Isolation and assay of the RSC chromatin-remodeling complex from Saccharomyces cerevisiae. , 2003, Methods in enzymology.
[27] H. Martinson,et al. Nucleosomes will not form on double-stranded RNa or over poly(dA).poly(dT) tracts in recombinant DNA. , 1981, Nucleic acids research.
[28] Zhenhai Zhang,et al. A Packing Mechanism for Nucleosome Organization Reconstituted Across a Eukaryotic Genome , 2011, Science.