Cancer Progression Gene Expression Profiling Identifies the Urokinase Plasminogen Activator Receptor as a Biomarker of Metastasis in Cutaneous Squamous Cell Carcinoma
暂无分享,去创建一个
A. S. Thind | Jonathan R. Clark | J.R. Mitchell | M. Ranson | B. Ashford | Ruta Gupta | S. Mueller | Benjamin Genenger | J. Perry | E. Minaei | A. Thind
[1] Shannon C. Trotter,et al. Enhanced metastatic risk assessment in cutaneous squamous cell carcinoma with the 40-gene expression profile test. , 2021, Future oncology.
[2] M. Migden,et al. Immunotherapy and Systemic Treatment of Cutaneous Squamous Cell Carcinoma , 2021, Dermatology practical & conceptual.
[3] Wenjuan Wu,et al. Identification of key genes in cutaneous squamous cell carcinoma: a transcriptome sequencing and bioinformatics profiling study , 2021, Annals of translational medicine.
[4] T. Becker,et al. Experimental and Clinical Evidence Supports the Use of Urokinase Plasminogen Activation System Components as Clinically Relevant Biomarkers in Gastroesophageal Adenocarcinoma , 2021, Cancers.
[5] A. Mes-Masson,et al. A Keratin 7 and E-Cadherin Signature Is Highly Predictive of Tubo-Ovarian High-Grade Serous Carcinoma Prognosis , 2021, International journal of molecular sciences.
[6] Yuan-yuan Mao,et al. PLAU1 Facilitated Proliferation, Invasion, and Metastasis via Interaction With MMP1 in Head and Neck Squamous Carcinoma , 2021, Frontiers in Oncology.
[7] A. S. Thind,et al. Comprehensive Mutational and Phenotypic Characterization of New Metastatic Cutaneous Squamous Cell Carcinoma Cell Lines Reveal Novel Drug Susceptibilities , 2020, International journal of molecular sciences.
[8] Jianbing Hou,et al. The Roles of Integrin α5β1 in Human Cancer , 2020, OncoTargets and therapy.
[9] Adam J. Rubin,et al. Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma , 2020, Cell.
[10] A. Wysong,et al. Targeted next-generation sequencing of matched localized and metastatic primary high-risk SCCs identifies driver and co-occurring mutations and novel therapeutic targets. , 2020, Journal of dermatological science.
[11] A. Chinnaiyan,et al. Invasive Squamous Cell Carcinomas and Precursor Lesions on UV-Exposed Epithelia Demonstrate Concordant Genomic Complexity in Driver Genes , 2020, Modern Pathology.
[12] Arjun Bhattacharya,et al. An approach for normalization and quality control for NanoString RNA expression data , 2020, bioRxiv.
[13] J. Lapins,et al. A comprehensive analysis of coding and non-coding transcriptomic changes in cutaneous squamous cell carcinoma , 2020, Scientific Reports.
[14] Xiaowei Wang,et al. miRDB: an online database for prediction of functional microRNA targets , 2019, Nucleic Acids Res..
[15] Mario Rosario Guarracino,et al. RankerGUI: A Computational Framework to Compare Differential Gene Expression Profiles Using Rank Based Statistics , 2019, International journal of molecular sciences.
[16] Thawfeek M. Varusai,et al. The reactome pathway knowledgebase , 2019, Nucleic Acids Res..
[17] Xiaowei Tang,et al. Identification of potential hub genes associated with the pathogenesis and prognosis of pancreatic duct adenocarcinoma using bioinformatics meta-analysis of multi-platform datasets , 2019, Oncology letters.
[18] Y. DeClerck,et al. The plasminogen activator inhibitor-1 paradox in cancer: a mechanistic understanding , 2019, Cancer and Metastasis Reviews.
[19] Jonathan R. Clark,et al. Is high-risk cutaneous squamous cell carcinoma of the head and neck a suitable candidate for current targeted therapies? , 2019, Journal of Clinical Pathology.
[20] J. Oliver,et al. sRNAbench and sRNAtoolbox 2019: intuitive fast small RNA profiling and differential expression , 2019, Nucleic Acids Res..
[21] Bin Zhang,et al. Identification of key candidate genes and pathways in oral squamous cell carcinoma by integrated Bioinformatics analysis , 2019, Experimental and therapeutic medicine.
[22] L. Nonell,et al. Transcriptome and cytogenetic profiling analysis of matched in situ/invasive cutaneous squamous cell carcinomas from immunocompetent patients , 2019, Genes, chromosomes & cancer.
[23] David Young,et al. Faculty Opinions recommendation of miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions. , 2019, Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature.
[24] Josip Madunić. The Urokinase Plasminogen Activator System in Human Cancers: An Overview of Its Prognostic and Predictive Role , 2018, Thrombosis and Haemostasis.
[25] M. Elwood,et al. The burden of non‐melanoma skin cancers in Auckland, New Zealand , 2018, The Australasian journal of dermatology.
[26] L. J. Lee,et al. PLAUR Confers Resistance to Gefitinib Through EGFR/P-AKT/Survivin Signaling Pathway , 2018, Cellular Physiology and Biochemistry.
[27] Carsten E Palme,et al. Analysis of clinically relevant somatic mutations in high-risk head and neck cutaneous squamous cell carcinoma , 2018, Modern Pathology.
[28] Jonathan R. Clark,et al. Analysis and Comparison of the 8th Edition American Joint Committee on Cancer (AJCC) Nodal Staging System in Cutaneous and Oral Squamous Cell Cancer of the Head and Neck , 2018, Annals of Surgical Oncology.
[29] Hsien-Da Huang,et al. miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions , 2017, Nucleic Acids Res..
[30] Shawn M. Gillespie,et al. Single-Cell Transcriptomic Analysis of Primary and Metastatic Tumor Ecosystems in Head and Neck Cancer , 2017, Cell.
[31] C. von Buchwald,et al. Urokinase-type plasminogen activator receptor (uPAR), tissue factor (TF) and epidermal growth factor receptor (EGFR): tumor expression patterns and prognostic value in oral cancer , 2017, BMC Cancer.
[32] Jonathan R. Clark,et al. Reviewing the genetic alterations in high‐risk cutaneous squamous cell carcinoma: A search for prognostic markers and therapeutic targets , 2017, Head & neck.
[33] C. Fan,et al. Immune-Related Gene Expression Profiling After PD-1 Blockade in Non-Small Cell Lung Carcinoma, Head and Neck Squamous Cell Carcinoma, and Melanoma. , 2017, Cancer research.
[34] J. Pérez-Losada,et al. Epidermal growth factor receptor expression is associated with poor outcome in cutaneous squamous cell carcinoma , 2017, The British journal of dermatology.
[35] Donavan T. Cheng,et al. Mutational Landscape of Metastatic Cancer Revealed from Prospective Clinical Sequencing of 10,000 Patients , 2017, Nature Medicine.
[36] M. Carolan,et al. The urokinase plasminogen activation system in gastroesophageal cancer: A systematic review and meta-analysis , 2017, Oncotarget.
[37] R. Mangues,et al. uPA/uPAR and SERPINE1 in head and neck cancer: role in tumor resistance, metastasis, prognosis and therapy , 2016, Oncotarget.
[38] Tsippi Iny Stein,et al. The GeneCards Suite: From Gene Data Mining to Disease Genome Sequence Analyses , 2016, Current protocols in bioinformatics.
[39] Jonathan R. Clark,et al. Prospective study of sentinel node biopsy for high‐risk cutaneous squamous cell carcinoma of the head and neck , 2016, Head & neck.
[40] Guangchuang Yu,et al. ReactomePA: an R/Bioconductor package for reactome pathway analysis and visualization. , 2016, Molecular bioSystems.
[41] Byul A. Jee,et al. Molecular classification of basal cell carcinoma of skin by gene expression profiling , 2015, Molecular carcinogenesis.
[42] C. Brombin,et al. Urokinase Receptor Promotes Skin Tumor Formation by Preventing Epithelial Cell Activation of Notch1. , 2015, Cancer research.
[43] Carolyn Staines,et al. Incidence and prevalence of non‐melanoma skin cancer in Australia: A systematic review , 2015, The Australasian journal of dermatology.
[44] P. Campbell,et al. Somatic mutation in cancer and normal cells , 2015, Science.
[45] Jonathan R. Clark,et al. Assessment of the new nodal classification for cutaneous squamous cell carcinoma and its effect on patient stratification , 2015, Head & neck.
[46] Matthew E. Ritchie,et al. limma powers differential expression analyses for RNA-sequencing and microarray studies , 2015, Nucleic acids research.
[47] W. Huber,et al. Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2 , 2014, Genome Biology.
[48] Curtis R. Pickering,et al. Mutational Landscape of Aggressive Cutaneous Squamous Cell Carcinoma , 2014, Clinical Cancer Research.
[49] Ángel M. Alganza,et al. sRNAbench: profiling of small RNAs and its sequence variants in single or multi-species high-throughput experiments , 2014 .
[50] R. Shaw,et al. SERPINE1 and SMA expression at the invasive front predict extracapsular spread and survival in oral squamous cell carcinoma , 2014, British Journal of Cancer.
[51] S. Steigen,et al. Urokinase Plasminogen Activator Receptor (uPAR) and Plasminogen Activator Inhibitor-1 (PAI-1) Are Potential Predictive Biomarkers in Early Stage Oral Squamous Cell Carcinomas (OSCC) , 2014, PloS one.
[52] Andreas Krämer,et al. Causal analysis approaches in Ingenuity Pathway Analysis , 2013, Bioinform..
[53] R. Hamoudi,et al. Key differences identified between actinic keratosis and cutaneous squamous cell carcinoma by transcriptome profiling , 2013, British Journal of Cancer.
[54] J. Carucci,et al. Gene expression profiling of the leading edge of cutaneous squamous cell carcinoma (SCC): IL-24 driven MMP-7 , 2013, The Journal of investigative dermatology.
[55] Davis J. McCarthy,et al. Differential expression analysis of multifactor RNA-Seq experiments with respect to biological variation , 2012, Nucleic acids research.
[56] Z. Werb,et al. The extracellular matrix: A dynamic niche in cancer progression , 2012, The Journal of cell biology.
[57] Sven Laur,et al. Robust rank aggregation for gene list integration and meta-analysis , 2012, Bioinform..
[58] Marcel Martin. Cutadapt removes adapter sequences from high-throughput sequencing reads , 2011 .
[59] Jonathan Clark,et al. Management of the neck in metastatic cutaneous squamous cell carcinoma of the head and neck , 2011, Current opinion in otolaryngology & head and neck surgery.
[60] F. Shah,et al. Combined Evaluation of Matrix Metalloproteinases and their Inhibitors has Better Clinical Utility in Oral Cancer , 2011, The International journal of biological markers.
[61] C. Compton,et al. The American Joint Committee on Cancer: the 7th Edition of the AJCC Cancer Staging Manual and the Future of TNM , 2010, Annals of Surgical Oncology.
[62] Shellaine R. Frazier,et al. Urinary-Type Plasminogen Activator Receptor/α3β1 Integrin Signaling, Altered Gene Expression, and Oral Tumor Progression , 2010, Molecular Cancer Research.
[63] J. Meléndez-Zajgla,et al. Tissue Inhibitor of Metalloproteinases-4. The road less traveled , 2008, Molecular Cancer.
[64] R. Khokha,et al. The Role of Tissue Inhibitors of Metalloproteinases in Tumorigenesis and Metastasis , 2008, Critical reviews in clinical laboratory sciences.
[65] M. Stack,et al. Urinary-type plasminogen activator (uPA) and its receptor (uPAR) in squamous cell carcinoma of the oral cavity. , 2007, The Biochemical journal.
[66] Sean R. Davis,et al. GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor , 2007, Bioinform..
[67] P. Dettmar,et al. Tumour-associated urokinase-type plasminogen activator (uPA) and its inhibitor PAI-1 in normal and neoplastic tissues of patients with squamous cell cancer of the oral cavity - clinical relevance and prognostic value. , 2005, Journal of cranio-maxillo-facial surgery : official publication of the European Association for Cranio-Maxillo-Facial Surgery.
[68] T. Turpeenniemi‐Hujanen,et al. Tissue Inhibitor of Matrix Metalloproteinase-1 Is Prognostic in Head and Neck Squamous Cell Carcinoma: Comparison of the Circulating and Tissue Immunoreactive Protein , 2005, Clinical Cancer Research.
[69] S. Burdach,et al. CpG island methylation and expression of tumour-associated genes in lung carcinoma. , 2005, European journal of cancer.
[70] Stephen J. Weiss,et al. MT1-MMP–dependent neovessel formation within the confines of the three-dimensional extracellular matrix , 2004, The Journal of cell biology.
[71] G. Tortolero-Luna,et al. Elevated expression of MMP-13 and TIMP-1 in head and neck squamous cell carcinomas may reflect increased tumor invasiveness , 2004, BMC Cancer.
[72] Y. Okada,et al. Enhanced production and activation of progelatinase A mediated by membrane-type 1 matrix metalloproteinase in human oral squamous cell carcinomas: Implications for lymph node metastasis , 2004, Clinical & Experimental Metastasis.
[73] M. Ranson,et al. Plasminogen binding and cancer: promises and pitfalls. , 2003, Frontiers in bioscience : a journal and virtual library.
[74] J. Foekens,et al. Enhanced benefit from adjuvant chemotherapy in breast cancer patients classified high-risk according to urokinase-type plasminogen activator (uPA) and plasminogen activator inhibitor type 1 (n = 3424). , 2002, Cancer research.
[75] Alex E. Lash,et al. Gene Expression Omnibus: NCBI gene expression and hybridization array data repository , 2002, Nucleic Acids Res..
[76] S. Eccles,et al. Expression of matrix metalloproteinases and their inhibitors correlates with invasion and metastasis in squamous cell carcinoma of the head and neck. , 2001, Archives of otolaryngology--head & neck surgery.
[77] R. Johnston,et al. Differential expression and localization of TIMP-1 and TIMP-4 in human gliomas , 2001, British Journal of Cancer.
[78] C. Overall,et al. Tissue inhibitor of metalloproteinases-4 inhibits but does not support the activation of gelatinase A via efficient inhibition of membrane type 1-matrix metalloproteinase. , 2001, Cancer research.
[79] L. Lund,et al. Cancer cell expression of urokinase-type plasminogen activator receptor mRNA in squamous cell carcinomas of the skin. , 2001, The Journal of investigative dermatology.
[80] H. Takeuchi,et al. Expression of MMPS, MT‐MMP, and TIMPs in squamous cell carcinoma of the oral cavity: Correlations with tumor invasion and metastasis , 1999, Head & neck.
[81] E. Lengyel,et al. UVB increases urokinase-type plasminogen activator receptor (uPAR) expression. , 1999, The Journal of investigative dermatology.
[82] S. Weiss,et al. Matrix Metalloproteinases Regulate Neovascularization by Acting as Pericellular Fibrinolysins , 1998, Cell.
[83] Y. Benjamini,et al. Controlling the false discovery rate: a practical and powerful approach to multiple testing , 1995 .
[84] H. Verspaget,et al. Urokinase receptor and colorectal cancer survival , 1994, The Lancet.
[85] N. Brünner,et al. Urokinase and plasminogen activator inhibitor type 1 in pulmonary adenocarcinoma. , 1994, Cancer research.