Multi-tissue Mesh Generation for Brain Images

We develop a multi-tissue mesh generation method that is suitable for finite element simulation involved in non-rigid registration and surgery simulation of brain images. We focus on the following four critical mesh properties: tissue-dependent resolution, fidelity to tissue boundaries, smoothness of mesh surfaces, and element quality. Each mesh property can be controlled on a tissue level. This method consists of two steps. First, a coarse multi-tissue mesh with tissue-dependent resolution is generated according to a predefined subdivision criterion. Then, a tissue-aware point-based registration method is used to find an optimal trade-off among fidelity, smoothness, and quality. We evaluated our method on a number of images ranging from MRI, visible human, to brain atlas. The experimental results verify the features of this method.

[1]  Ross T. Whitaker,et al.  Particle-based Sampling and Meshing of Surfaces in Multimaterial Volumes , 2008, IEEE Transactions on Visualization and Computer Graphics.

[2]  Karol Miller,et al.  Patient-specific model of brain deformation: application to medical image registration. , 2007, Journal of biomechanics.

[3]  K. Bathe Finite Element Procedures , 1995 .

[4]  Christopher J. Taylor,et al.  Medical Image Computing and Computer-Assisted Intervention – MICCAI 2009 , 2009, Lecture Notes in Computer Science.

[5]  Hanspeter Pfister,et al.  Volume MLS Ray Casting , 2008, IEEE Transactions on Visualization and Computer Graphics.

[6]  Alexei A. Maradudin,et al.  Space groups for solid state scientists , 1979 .

[7]  Hervé Delingette,et al.  Robust nonrigid registration to capture brain shift from intraoperative MRI , 2005, IEEE Transactions on Medical Imaging.

[8]  Laurent Rineau,et al.  High-Quality Consistent Meshing of Multi-label Datasets , 2007, IPMI.

[9]  Mariette Yvinec,et al.  Mesh Generation from 3D Multi-material Images , 2009, MICCAI.

[10]  Ronald Fedkiw,et al.  A Crystalline, Red Green Strategy for Meshing Highly Deformable Objects with Tetrahedra , 2003, IMR.

[11]  Chandrajit L Bajaj,et al.  An Automatic 3D Mesh Generation Method for Domains with Multiple Materials. , 2010, Computer methods in applied mechanics and engineering.

[12]  Herbert Edelsbrunner,et al.  Sliver exudation , 2000, J. ACM.

[13]  M. Bierling,et al.  Displacement Estimation By Hierarchical Blockmatching , 1988, Other Conferences.