A single‐cell transcriptome atlas of the adult human retina
暂无分享,去创建一个
Peng-Yuan Wang | Quan Nguyen | Ling Zhu | Joseph E Powell | Ting Zhang | Jafar S Jabbari | Alex W Hewitt | Ulrike Grünert | Jafar S. Jabbari | Anne Senabouth | Samuel W Lukowski | T. Lamb | A. Sharov | J. Powell | U. Grünert | M. Gillies | A. Hewitt | A. Senabouth | Q. Nguyen | S. Lukowski | Emily Welby | Ling Zhu | C. Lo | J. Sowden | Trevor D Lamb | Lyujie Fang | Sandy S. C. Hung | Ting Zhang | Tu Nguyen | Hayley S. Waugh | A. Mackey | Graeme Pollock | Peng Wang | R. C. Wong | Mark C Gillies | Alexei A Sharov | Camden Y Lo | Lyujie Fang | Sandy Sc Hung | Tu Nguyen | Emily Welby | Jane C Sowden | Hayley S Waugh | Adrienne Mackey | Graeme Pollock | Raymond Cb Wong | J. Powell | Raymond C. B. Wong | J. Powell | Peng-Yuan Wang
[1] J. Provis,et al. Differential expression of anti-angiogenic factors and guidance genes in the developing macula , 2009, Molecular vision.
[2] I. Pinilla,et al. Astrocytes and Müller Cell Alterations During Retinal Degeneration in a Transgenic Rat Model of Retinitis Pigmentosa , 2015, Front. Cell. Neurosci..
[3] Andrew P. Voigt,et al. Molecular characterization of foveal versus peripheral human retina by single-cell RNA sequencing. , 2019, Experimental eye research.
[4] Aleksandra A. Kolodziejczyk,et al. Classification of low quality cells from single-cell RNA-seq data , 2016, Genome Biology.
[5] T. Nakazawa,et al. Culture Systems of Dissociated Mouse and Human Pluripotent Stem Cell-Derived Retinal Ganglion Cells Purified by Two-Step Immunopanning. , 2018, Investigative ophthalmology & visual science.
[6] O. Lichtarge,et al. Characterization of retinal guanylate cyclase‐activating protein 3 (GCAP3) from zebrafish to man , 2002, The European journal of neuroscience.
[7] G. Reifenberger,et al. Thymosin β 4 gene silencing decreases stemness and invasiveness in glioblastoma. , 2014, Brain : a journal of neurology.
[8] G. Grant,et al. Transcriptome analyses of the human retina identify unprecedented transcript diversity and 3.5 Mb of novel transcribed sequence via significant alternative splicing and novel genes , 2013, BMC Genomics.
[9] Monika S. Kowalczyk,et al. Single-cell RNA-seq reveals changes in cell cycle and differentiation programs upon aging of hematopoietic stem cells , 2015, Genome research.
[10] Adam P. DeLuca,et al. Transcriptomic analysis across nasal, temporal, and macular regions of human neural retina and RPE/choroid by RNA-Seq. , 2014, Experimental eye research.
[11] J. Luna,et al. A journey into the retina: Müller glia commanding survival and death , 2018, The European journal of neuroscience.
[12] Chris P. Ponting,et al. Assessing similarity to primary tissue and cortical layer identity in induced pluripotent stem cell-derived cortical neurons through single-cell transcriptomics , 2016, Human molecular genetics.
[13] A. Hewitt,et al. Drug discovery using induced pluripotent stem cell models of neurodegenerative and ocular diseases☆ , 2017, Pharmacology & therapeutics.
[14] J. Corbo,et al. A typology of photoreceptor gene expression patterns in the mouse , 2007, Proceedings of the National Academy of Sciences.
[15] M. Adams,et al. Transcriptome analysis reveals rod/cone photoreceptor specific signatures across mammalian retinas. , 2016, Human molecular genetics.
[16] J. Hurley,et al. A thyroid hormone receptor that is required for the development of green cone photoreceptors , 2001, Nature Genetics.
[17] G. A. Limb,et al. The human Müller cell line MIO-M1 expresses opsins , 2011, Molecular vision.
[18] Thomas R. Gingeras,et al. STAR: ultrafast universal RNA-seq aligner , 2013, Bioinform..
[19] Maria Nicoletta Moretti,et al. An atlas of gene expression and gene co-regulation in the human retina , 2016, Nucleic acids research.
[20] G. A. Limb,et al. MIO‐M1 Cells and Similar Müller Glial Cell Lines Derived from Adult Human Retina Exhibit Neural Stem Cell Characteristics , 2007, Stem cells.
[21] Emily Welby,et al. Isolation of Human Photoreceptor Precursors via a Cell Surface Marker Panel from Stem Cell‐Derived Retinal Organoids and Fetal Retinae , 2018, Stem cells.
[22] Ulrich Sure,et al. Edinburgh Research Explorer Spatial and temporal heterogeneity of mouse and human microglia at single-cell resolution , 2022 .
[23] Elisha D O Roberson,et al. Retinal Ganglion Cells Downregulate Gene Expression and Lose Their Axons within the Optic Nerve Head in a Mouse Glaucoma Model , 2008, The Journal of Neuroscience.
[24] Seth Blackshaw,et al. Comprehensive Analysis of Photoreceptor Gene Expression and the Identification of Candidate Retinal Disease Genes , 2001, Cell.
[25] Shuai Yang,et al. Long Non-Coding RNA MALAT1 Mediates Transforming Growth Factor Beta1-Induced Epithelial-Mesenchymal Transition of Retinal Pigment Epithelial Cells , 2016, PloS one.
[26] Andrew D. Rouillard,et al. Enrichr: a comprehensive gene set enrichment analysis web server 2016 update , 2016, Nucleic Acids Res..
[27] Dave T. Gerrard,et al. Phenotypic and functional analyses show stem cell-derived hepatocyte-like cells better mimic fetal rather than adult hepatocytes , 2015, Journal of hepatology.
[28] Z. Kozmík,et al. Onecut1 and Onecut2 transcription factors operate downstream of Pax6 to regulate horizontal cell development. , 2015, Developmental biology.
[29] J. Marioni,et al. Pooling across cells to normalize single-cell RNA sequencing data with many zero counts , 2016, Genome Biology.
[30] Vijender Chaitankar,et al. Molecular Anatomy of the Developing Human Retina. , 2017, Developmental cell.
[31] David T. Jones,et al. Isolation and Comparative Transcriptome Analysis of Human Fetal and iPSC-Derived Cone Photoreceptor Cells , 2017, Stem cell reports.
[32] Tamar Dvash,et al. Molecular signature of primary retinal pigment epithelium and stem-cell-derived RPE cells. , 2010, Human molecular genetics.
[33] B. J. Klevering,et al. The spectrum of retinal dystrophies caused by mutations in the peripherin/RDS gene , 2008, Progress in Retinal and Eye Research.
[34] Elena Vecino,et al. Glia–neuron interactions in the mammalian retina , 2016, Progress in Retinal and Eye Research.
[35] Evan Z. Macosko,et al. Comprehensive Classification of Retinal Bipolar Neurons by Single-Cell Transcriptomics , 2016, Cell.
[36] F. Marlow,et al. Tbx2b is required for ultraviolet photoreceptor cell specification during zebrafish retinal development , 2009, Proceedings of the National Academy of Sciences.
[37] A. Regev,et al. Molecular Classification and Comparative Taxonomics of Foveal and Peripheral Cells in Primate Retina , 2018, Cell.
[38] Grace E. Lidgerwood,et al. Enriched retinal ganglion cells derived from human embryonic stem cells , 2016, Scientific Reports.
[39] G. Abecasis,et al. Transcriptome analysis and molecular signature of human retinal pigment epithelium , 2010, Human molecular genetics.
[40] Li-Xin Sun,et al. Long Non-Coding RNA-MALAT1 Mediates Retinal Ganglion Cell Apoptosis Through the PI3K/Akt Signaling Pathway in Rats with Glaucoma , 2017, Cellular Physiology and Biochemistry.
[41] Grace X. Y. Zheng,et al. Massively parallel digital transcriptional profiling of single cells , 2016, Nature Communications.
[42] Paul Hoffman,et al. Integrating single-cell transcriptomic data across different conditions, technologies, and species , 2018, Nature Biotechnology.
[43] W. Su,et al. Precise long non-coding RNA modulation in visual maintenance and impairment , 2016, Journal of Medical Genetics.
[44] R. Johnston,et al. Mechanisms of Photoreceptor Patterning in Vertebrates and Invertebrates. , 2016, Trends in genetics : TIG.
[45] Evan Z. Macosko,et al. Highly Parallel Genome-wide Expression Profiling of Individual Cells Using Nanoliter Droplets , 2015, Cell.
[46] Shigeo Yoshida,et al. Expression profiling of the developing and mature Nrl-/- mouse retina: identification of retinal disease candidates and transcriptional regulatory targets of Nrl. , 2004, Human molecular genetics.
[47] A. Webster,et al. Novel retinal and cone photoreceptor transcripts revealed by human macular expression profiling. , 2007, Investigative ophthalmology & visual science.
[48] R. Stewart,et al. A Novel Approach to Single Cell RNA‐Sequence Analysis Facilitates In Silico Gene Reporting of Human Pluripotent Stem Cell‐Derived Retinal Cell Types , 2018, Stem cells.
[49] G. A. Limb,et al. In vitro characterization of a spontaneously immortalized human Müller cell line (MIO-M1). , 2002, Investigative ophthalmology & visual science.
[50] J. Corbo,et al. Transcriptome profiling of developing photoreceptor subtypes reveals candidate genes involved in avian photoreceptor diversification , 2015, The Journal of comparative neurology.
[51] David Williams,et al. The arrangement of the three cone classes in the living human eye , 1999, Nature.
[52] D. Zack,et al. Differentiation of human ESCs to retinal ganglion cells using a CRISPR engineered reporter cell line , 2015, Scientific Reports.
[53] M. Robinson,et al. A scaling normalization method for differential expression analysis of RNA-seq data , 2010, Genome Biology.
[54] Ping-Wu Zhang,et al. Thyroid hormone signaling specifies cone subtypes in human retinal organoids , 2018, Science.
[55] R. Masland,et al. The Major Cell Populations of the Mouse Retina , 1998, The Journal of Neuroscience.