Automated Processing of Post-Mortem Cortex Images Reveals Physiological Changes Associated with Dementia Sub-types

Automated classification is a well established technique for pattern recognition. In this work, the focus is upon testing for detectable differences between categories, rather than upon building a model for predicting category from new data. We applied image processing and pattern recognition techniques to determine whether there are differentiating features in the structure of blood vessels of the cortex when comparing dementia, its subtypes, and normal cortex. We derived measures from images of tissue using multi fractal analysis, which complements more conventional image analysis techniques. Although statistical methods found no evidence of differences between dementia subtypes, several machine learning methods were able to correctly classify many instances, leading us to conclude that detectable difference do exist. Further investigation along these lines may provide new understanding of the causes, pathology and treatment of these diseases. Our findings demonstrate the utility of multi-fractal analysis combined with machine learning techniques in dementia research.

[1]  S S Cross,et al.  FRACTALS IN PATHOLOGY , 1997, The Journal of pathology.

[2]  Hai-Shan Wu,et al.  Fractal characterization of chromatin appearance for diagnosis in breast cytology , 1998, The Journal of pathology.

[3]  W. B. Marks,et al.  A fractal analysis of cell images , 1989, Journal of Neuroscience Methods.

[4]  Hirohiko Kimura,et al.  Quantitative evaluation of magnetic resonance imaging of deep white matter hyperintensity in geriatric patients by multifractal analysis , 2001, Neuroscience Letters.

[5]  G Landini,et al.  Discrimination of complex histopathological tumour profiles by experienced and inexperienced observers. , 1997, Journal of oral pathology & medicine : official publication of the International Association of Oral Pathologists and the American Academy of Oral Pathology.

[6]  B. Efron Estimating the Error Rate of a Prediction Rule: Improvement on Cross-Validation , 1983 .

[7]  Ian H. Witten,et al.  Data mining: practical machine learning tools and techniques with Java implementations , 2002, SGMD.

[8]  E Louis,et al.  Are neurons multifractals? , 1999, Journal of Neuroscience Methods.

[9]  M. Giger,et al.  Multifractal radiographic analysis of osteoporosis. , 1994, Medical physics.

[10]  R. Fisher THE USE OF MULTIPLE MEASUREMENTS IN TAXONOMIC PROBLEMS , 1936 .

[11]  R. Pawlinski,et al.  Morphology of reactive microglia in the injured cerebral cortex. Fractal analysis and complementary quantitative methods , 2001, Journal of neuroscience research.

[12]  W. N. Street,et al.  Computer-derived nuclear features distinguish malignant from benign breast cytology. , 1995, Human pathology.

[13]  T. Vicsek Fractal Growth Phenomena , 1989 .

[14]  G A Hurwitz,et al.  The predictive and explanatory power of inductive decision trees: a comparison with artificial neural network learning as applied to the noninvasive diagnosis of coronary artery disease. , 1997, Journal of investigative medicine : the official publication of the American Federation for Clinical Research.

[15]  J. Ross Quinlan,et al.  Induction of Decision Trees , 1986, Machine Learning.

[16]  E. Sabo,et al.  Microscopic analysis and significance of vascular architectural complexity in renal cell carcinoma. , 2001, Clinical cancer research : an official journal of the American Association for Cancer Research.

[17]  Ron Kohavi,et al.  The Power of Decision Tables , 1995, ECML.

[18]  A. Pouliakis,et al.  Comparative study of artificial neural networks in the discrimination between benign from malignant gastric cells. , 1997, Analytical and quantitative cytology and histology.

[19]  S. Blacher,et al.  Fractal Quantification of the Microvasculature Heterogeneity in Cutaneous Melanoma , 1999, Dermatology.

[20]  Dennis D. Spencer,et al.  Visualization of Chemokine Binding Sites on Human Brain Microvessels , 1999, The Journal of cell biology.

[21]  Herbert F. Jelinek,et al.  Segmentation of retinal fundus vasculature in nonmydriatic camera images using wavelets: Advanced Segmentation Techniques , 2003 .

[22]  Elisabet Englund,et al.  Neuropathology of White Matter Changes in Alzheimer’s Disease and Vascular Dementia , 1998, Dementia and Geriatric Cognitive Disorders.

[23]  C. D. Kemp,et al.  Density Estimation for Statistics and Data Analysis , 1987 .

[24]  Herbert Jelinek,et al.  Application of artificial neural networks to cat retinal ganglion cell categorization , 1994 .

[25]  David Cornforth,et al.  The Kernel Addition Training Algorithm: Faster Training for CMAC Based Neural Networks , 2001 .

[26]  John H. Holland,et al.  Adaptation in Natural and Artificial Systems: An Introductory Analysis with Applications to Biology, Control, and Artificial Intelligence , 1992 .

[27]  S. Cross,et al.  The Applications of Fractal Geometry in Pathology , 1995 .

[28]  G. D. Lange,et al.  Biological Cellular Morphometry-Fractal Dimensions, Lacunarity and Multifractals , 1998 .

[29]  James S. Albus,et al.  New Approach to Manipulator Control: The Cerebellar Model Articulation Controller (CMAC)1 , 1975 .

[30]  G. Henebry,et al.  Fractal signature and lacunarity in the measurement of the texture of trabecular bone in clinical CT images. , 2001, Medical engineering & physics.

[31]  M. Khokha,et al.  Fractal Geometry in Biological Systems: An Analytical Approach , 1996 .

[32]  S Lee,et al.  Superiority of neural networks over discriminant functions for thalassemia minor screening of red blood cell microcytosis. , 1995, Archives of pathology & laboratory medicine.

[33]  T. Bayes An essay towards solving a problem in the doctrine of chances , 2003 .

[34]  H. Schellnhuber,et al.  Efficient box-counting determination of generalized fractal dimensions. , 1990, Physical Review A. Atomic, Molecular, and Optical Physics.

[35]  Thomas G. Dietterich,et al.  Solving Multiclass Learning Problems via Error-Correcting Output Codes , 1994, J. Artif. Intell. Res..

[36]  Hideki Takayasu,et al.  Fractals in the Physical Sciences , 1990 .

[37]  Herbert F. Jelinek,et al.  Categorization of physiologically and morphologically characterized non-?/non-? cat retinal ganglion cells using fractal geometry , 1997 .

[38]  Richard O. Duda,et al.  Pattern classification and scene analysis , 1974, A Wiley-Interscience publication.

[39]  H F Jelinek,et al.  Use of fractal theory in neuroscience: methods, advantages, and potential problems. , 2001, Methods.