Polymerase assays for lead discovery: An overall review of methodologies and approaches.
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[1] D. Bojanic,et al. Impact of high-throughput screening in biomedical research , 2011, Nature Reviews Drug Discovery.
[2] R. Wood,et al. DNA polymerases and cancer , 2011, Nature Reviews Cancer.
[3] R. Koff. Review article: the efficacy and safety of sofosbuvir, a novel, oral nucleotide NS5B polymerase inhibitor, in the treatment of chronic hepatitis C virus infection , 2014, Alimentary pharmacology & therapeutics.
[4] K. Saxena,et al. Biophysical investigation and conformational analysis of p38α kinase inhibitor doramapimod and its analogues , 2016 .
[5] Charles A. Lesburg,et al. Crystal structure of the RNA-dependent RNA polymerase from hepatitis C virus reveals a fully encircled active site , 1999, Nature Structural Biology.
[6] A. Shapiro,et al. A homogeneous, high-throughput fluorescence resonance energy transfer-based DNA polymerase assay. , 2005, Analytical biochemistry.
[7] P. Anderson,et al. L-743, 726 (DMP-266): a novel, highly potent nonnucleoside inhibitor of the human immunodeficiency virus type 1 reverse transcriptase , 1995, Antimicrobial agents and chemotherapy.
[8] S. Sturla,et al. Quantification of pyrophosphate as a universal approach to determine polymerase activity and assay polymerase inhibitors. , 2015, Analytical biochemistry.
[9] Hongping Dong,et al. Potent Allosteric Dengue Virus NS5 Polymerase Inhibitors: Mechanism of Action and Resistance Profiling , 2016, PLoS pathogens.
[10] M. Otto,et al. Inhibition of Hepatitis C Replicon RNA Synthesis by β-D-2′-deoxy-2′-fluoro-2′-C-Methylcytidine: A Specific Inhibitor of Hepatitis C Virus Replication , 2006, Antiviral chemistry & chemotherapy.
[11] A. Marx,et al. A molecular beacon for quantitative monitoring of the DNA polymerase reaction in real-time. , 2002, Angewandte Chemie.
[12] Eoin Coakley,et al. Treatment of HCV with ABT-450/r-ombitasvir and dasabuvir with ribavirin. , 2014, The New England journal of medicine.
[13] A. Marx,et al. Small Molecule Inhibitors of Human DNA Polymerase λ. , 2011, ACS chemical biology.
[14] David J. Marchant,et al. Recombinant RNA-Dependent RNA Polymerase Complex of Ebola Virus , 2018, Scientific Reports.
[15] U. H. Danielson,et al. Biophysics in drug discovery: impact, challenges and opportunities , 2016, Nature Reviews Drug Discovery.
[16] Grace Campagnola,et al. High-throughput screening identification of poliovirus RNA-dependent RNA polymerase inhibitors. , 2011, Antiviral research.
[17] L. Bastide,et al. Progress in targeting bacterial transcription. , 2007, Drug discovery today.
[18] S. Nelson,et al. A High-Throughput Assay to Identify Inhibitors of the Apicoplast DNA Polymerase from Plasmodium falciparum , 2014, Journal of biomolecular screening.
[19] I. Chopra,et al. Bacterial RNA polymerase: a promising target for the discovery of new antimicrobial agents. , 2007, Current opinion in investigational drugs.
[20] Carolina Q. Sacramento,et al. The clinically approved antiviral drug sofosbuvir inhibits Zika virus replication , 2017, Scientific Reports.
[21] David M. Jameson,et al. [12] Fluorescence anisotropy applied to biomolecular interactions , 1995 .
[22] D. Earnshaw,et al. Mode of antiviral action of penciclovir in MRC-5 cells infected with herpes simplex virus type 1 (HSV-1), HSV-2, and varicella-zoster virus , 1992, Antimicrobial Agents and Chemotherapy.
[23] C. Kao,et al. An update on small molecule inhibitors of the HCV NS5B polymerase: effects on RNA synthesis in vitro and in cultured cells, and potential resistance in viral quasispecies , 2010 .
[24] T. Steitz,et al. Crystal structure at 3.5 A resolution of HIV-1 reverse transcriptase complexed with an inhibitor. , 1992, Science.
[25] D. Whitcombe,et al. Detection of PCR products using self-probing amplicons and fluorescence , 1999, Nature Biotechnology.
[26] D. Plant,et al. High-Throughput Screening of RNA Polymerase Inhibitors Using a Fluorescent UTP Analog , 2006, Journal of biomolecular screening.
[27] Sanjay Tyagi,et al. Molecular Beacons: Probes that Fluoresce upon Hybridization , 1996, Nature Biotechnology.
[28] Christopher P Austin,et al. Quantitative analyses of aggregation, autofluorescence, and reactivity artifacts in a screen for inhibitors of a thiol protease. , 2010, Journal of medicinal chemistry.
[29] T. Steitz. DNA Polymerases: Structural Diversity and Common Mechanisms* , 1999, The Journal of Biological Chemistry.
[30] B. Shoichet. Screening in a spirit haunted world. , 2006, Drug discovery today.
[31] P. Niyomrattanakit,et al. A Fluorescence-Based Alkaline Phosphatase–Coupled Polymerase Assay for Identification of Inhibitors of Dengue Virus RNA-Dependent RNA Polymerase , 2011, Journal of biomolecular screening.
[32] L. Kiss,et al. A fluorescence polarization based assay for the identification and characterization of polymerase inhibitors. , 2016, Bioorganic & medicinal chemistry letters.
[33] D. Richman,et al. Antiviral drug resistance. , 2006, Antiviral research.
[34] K. Murakami,et al. Mode of Action of Kanglemycin A, an Ansamycin Natural Product that Is Active against Rifampicin-Resistant Mycobacterium tuberculosis , 2018, Molecular cell.
[35] S. Hay,et al. A quantitative fluorescence‐based steady‐state assay of DNA polymerase , 2014, The FEBS journal.
[36] J. Falgueyret,et al. A High-Throughput Continuous Assay for Screening and Characterization of Inhibitors of HIV Reverse-Transcriptase DNA Polymerase Activity , 2011, Journal of biomolecular screening.
[37] Scott A. Busby,et al. Identifying Initiation and Elongation Inhibitors of Dengue Virus RNA Polymerase in a High-Throughput Lead-Finding Campaign , 2015, Journal of biomolecular screening.
[38] O. Peersen,et al. A fluorescence polarization-based screening assay for nucleic acid polymerase elongation activity. , 2007, Analytical biochemistry.
[39] G. Maga,et al. Selective Interaction of the Human Immunodeficiency Virus Type 1 Reverse Transcriptase Nonnucleoside Inhibitor Efavirenz and Its Thio-Substituted Analog with Different Enzyme-Substrate Complexes , 2000, Antimicrobial Agents and Chemotherapy.
[40] S. LaPlante,et al. Non-nucleoside inhibitors of the hepatitis C virus NS5B polymerase: discovery and preliminary SAR of benzimidazole derivatives. , 2004, Bioorganic & medicinal chemistry letters.
[41] A. C. Krueger,et al. Highlights of the Structure-Activity Relationships of Benzimidazole Linked Pyrrolidines Leading to the Discovery of the Hepatitis C Virus NS5A Inhibitor Pibrentasvir (ABT-530). , 2018, Journal of medicinal chemistry.
[42] R. Hartmann,et al. A detective story in drug discovery: elucidation of a screening artifact reveals polymeric carboxylic acids as potent inhibitors of RNA polymerase. , 2013, Chemistry.
[43] A. Jadhav,et al. A Comprehensive Strategy to Discover Inhibitors of the Translesion Synthesis DNA Polymerase κ , 2012, PloS one.
[44] Arkady Mustaev,et al. Structural Mechanism for Rifampicin Inhibition of Bacterial RNA Polymerase , 2001, Cell.
[45] Björn Sjögreen,et al. The real-time polymerase chain reaction. , 2006, Molecular aspects of medicine.
[46] U. Haupts,et al. Homogeneous fluorescence readouts for miniaturized high-throughput screening: theory and practice. , 1999, Drug discovery today.
[47] A. Berdis. DNA polymerases as therapeutic targets. , 2008, Biochemistry.
[48] B. Malcolm,et al. A continuous nonradioactive assay for RNA-dependent RNA polymerase activity. , 2004, Analytical biochemistry.
[49] D. Ullmann,et al. PAIN-less identification and evaluation of small molecule inhibitors against protein tyrosine phosphatase 1B. , 2017, MedChemComm.
[50] D. Earnshaw,et al. FlashPlate Scintillation Proximity Assays for Characterization and Screening of DNA Polymerase, Primase, and Helicase Activities , 2001, Journal of biomolecular screening.
[51] S. V. Van Doren,et al. Rapid determination of enzyme kinetics from fluorescence: overcoming the inner filter effect. , 2007, Analytical biochemistry.
[52] D. Hazuda,et al. HIV-1 antiretroviral drug therapy. , 2012, Cold Spring Harbor perspectives in medicine.
[53] E S Bishop,et al. Characterization of PicoGreen interaction with dsDNA and the origin of its fluorescence enhancement upon binding. , 2010, Biophysical journal.
[54] M. Mcgrath,et al. Structural basis for RNA replication by the hepatitis C virus polymerase , 2015, Science.
[55] J. Owicki,et al. Fluorescence Polarization and Anisotropy in High Throughput Screening: Perspectives and Primer , 2000, Journal of biomolecular screening.
[56] P. Lewis,et al. Bacterial Transcription as a Target for Antibacterial Drug Development , 2016, Microbiology and Molecular Reviews.
[57] P. White,et al. A Fluorescence-Based High-Throughput Screen to Identify Small Compound Inhibitors of the Genotype 3a Hepatitis C Virus RNA Polymerase , 2013, Journal of biomolecular screening.
[58] A. Palani,et al. Development of a New Structural Class of Broadly Acting HCV Non‐Nucleoside Inhibitors Leading to the Discovery of MK‐8876 , 2017, ChemMedChem.