Metaviz: interactive statistical and visual analysis of metagenomic data
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Niklas Elmqvist | Florin Chelaru | Jayaram Kancherla | Justin Wagner | Héctor Corrada Bravo | Anup Mahurkar | Joseph N Paulson | Victor Felix | N. Elmqvist | Justin Wagner | Jayaram Kancherla | J. Paulson | Victor Felix | Héctor Corrada Bravo | Alexander Zhang | A. Mahurkar | Florin Chelaru | Alexander Zhang
[1] M. Pop,et al. Individual-specific changes in the human gut microbiota after challenge with enterotoxigenic Escherichia coli and subsequent ciprofloxacin treatment , 2016, BMC Genomics.
[2] Florin Chelaru,et al. Epiviz: a view inside the design of an integrated visual analysis software for genomics , 2015, BMC Bioinformatics.
[3] A. Murat Eren,et al. VAMPS: a website for visualization and analysis of microbial population structures , 2014, BMC Bioinformatics.
[4] Luis Pedro Coelho,et al. Structure and function of the global ocean microbiome , 2015, Science.
[5] Allyson L. Byrd,et al. Biogeography and individuality shape function in the human skin metagenome , 2014, Nature.
[6] Shawn Rynearson,et al. Taxonomer: an interactive metagenomics analysis portal for universal pathogen detection and host mRNA expression profiling , 2016, Genome Biology.
[7] Adam M. Phillippy,et al. Interactive metagenomic visualization in a Web browser , 2011, BMC Bioinformatics.
[8] Jeffrey Heer,et al. D³ Data-Driven Documents , 2011, IEEE Transactions on Visualization and Computer Graphics.
[9] Paolo Manghi,et al. Accessible, curated metagenomic data through ExperimentHub , 2017, Nature Methods.
[10] Jeffrey Heer,et al. SpanningAspectRatioBank Easing FunctionS ArrayIn ColorIn Date Interpolator MatrixInterpola NumObjecPointI Rectang ISchedu Parallel Pause Scheduler Sequen Transition Transitioner Transiti Tween Co DelimGraphMLCon IData JSONCon DataField DataSc Dat DataSource Data DataUtil DirtySprite LineS RectSprite , 2011 .
[11] Guido V. Bloemberg,et al. Recognition of Potentially Novel Human Disease-Associated Pathogens by Implementation of Systematic 16S rRNA Gene Sequencing in the Diagnostic Laboratory , 2010, Journal of Clinical Microbiology.
[12] Héctor Corrada Bravo,et al. Epiviz: interactive visual analytics for functional genomics data , 2014, Nature Methods.
[13] Tom O. Delmont,et al. Anvi’o: an advanced analysis and visualization platform for ‘omics data , 2015, PeerJ.
[14] Cristina Aurrecoechea,et al. MicrobiomeDB: a systems biology platform for integrating, mining and analyzing microbiome experiments , 2017, bioRxiv.
[15] M. Pop,et al. Robust methods for differential abundance analysis in marker gene surveys , 2013, Nature Methods.
[16] Tom H. Pringle,et al. The human genome browser at UCSC. , 2002, Genome research.
[17] Georgios A. Pavlopoulos,et al. Uncovering Earth’s virome , 2016, Nature.
[18] C. Huttenhower,et al. Metagenomic microbial community profiling using unique clade-specific marker genes , 2012, Nature Methods.
[19] Intawat Nookaew,et al. PanViz: interactive visualization of the structure of functionally annotated pangenomes , 2016, Bioinform..
[20] Mihai Pop,et al. Diarrhea in young children from low-income countries leads to large-scale alterations in intestinal microbiota composition , 2014, Genome Biology.
[21] J. Doré,et al. Structural robustness of the gut mucosal microbiota is associated with Crohn's disease remission after surgery , 2015, Gut.
[22] Raimund Dachselt,et al. FacetZoom: a continuous multi-scale widget for navigating hierarchical metadata , 2008, CHI.
[23] J. Gaudart,et al. Tropheryma whipplei associated with diarrhoea in young children. , 2016, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.
[24] Nayoung Kim,et al. Analysis of Gastric Body Microbiota by Pyrosequencing: Possible Role of Bacteria Other Than Helicobacter pylori in the Gastric Carcinogenesis , 2017, Journal of cancer prevention.