Expression and modification proteomics during skeletal muscle ageing

[1]  Adelina Rogowska-Wrzesinska,et al.  2D gels still have a niche in proteomics. , 2013, Journal of proteomics.

[2]  B. Friguet,et al.  Oxidative proteome modifications target specific cellular pathways during oxidative stress, cellular senescence and aging , 2013, Experimental Gerontology.

[3]  Y. Hathout,et al.  Dystrophin deficiency leads to disturbance of LAMP1-vesicle-associated protein secretion , 2013, Cellular and Molecular Life Sciences.

[4]  A. Bigot,et al.  In-depth analysis of the secretome identifies three major independent secretory pathways in differentiating human myoblasts. , 2012, Journal of proteomics.

[5]  B. Friguet,et al.  Protein Oxidative Damage at the Crossroads of Cellular Senescence, Aging, and Age-Related Diseases , 2012, Oxidative medicine and cellular longevity.

[6]  F. Casanueva,et al.  Muscle tissue as an endocrine organ: comparative secretome profiling of slow-oxidative and fast-glycolytic rat muscle explants and its variation with exercise. , 2012, Journal of proteomics.

[7]  D. Swandulla,et al.  Mass spectrometry-based proteomic analysis of middle-aged vs. aged vastus lateralis reveals increased levels of carbonic anhydrase isoform 3 in senescent human skeletal muscle , 2012, International journal of molecular medicine.

[8]  S. Ryu,et al.  Secretomics for skeletal muscle cells: a discovery of novel regulators? , 2012, Advances in biological regulation.

[9]  M. Baraibar,et al.  A mutant light-chain ferritin that causes neurodegeneration has enhanced propensity toward oxidative damage. , 2012, Free radical biology & medicine.

[10]  P. Roepstorff,et al.  Oxidative stress-induced proteome alterations target different cellular pathways in human myoblasts. , 2011, Free radical biology & medicine.

[11]  Thierry Rabilloud,et al.  Two-dimensional gel electrophoresis in proteomics: a tutorial. , 2011, Journal of proteomics.

[12]  T. Shiomi,et al.  Ryanodine receptor oxidation causes intracellular calcium leak and muscle weakness in aging. , 2011, Cell metabolism.

[13]  Liang-Jun Yan,et al.  Chemical probes for analysis of carbonylated proteins: a review. , 2011, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

[14]  J. C. McDermott,et al.  Secretome Analysis of Skeletal Myogenesis Using SILAC and Shotgun Proteomics , 2011, International journal of proteomics.

[15]  Michael P Washburn,et al.  Advances in shotgun proteomics and the analysis of membrane proteomes. , 2010, Journal of proteomics.

[16]  S. Schiaffino Fibre types in skeletal muscle: a personal account , 2010, Acta physiologica.

[17]  B. Blagoev,et al.  Dynamics of the Skeletal Muscle Secretome during Myoblast Differentiation* , 2010, Molecular & Cellular Proteomics.

[18]  F. Regnier,et al.  Proteomic identification of carbonylated proteins and their oxidation sites. , 2010, Journal of proteome research.

[19]  Lisa Staunton,et al.  DIGE analysis of rat skeletal muscle proteins using nonionic detergent phase extraction of young adult versus aged gastrocnemius tissue. , 2010, Journal of proteomics.

[20]  R. Hoffmann,et al.  Identification, quantification, and functional aspects of skeletal muscle protein-carbonylation in vivo during acute oxidative stress. , 2010, Journal of proteome research.

[21]  P. Roepstorff,et al.  Protein modification and replicative senescence of WI‐38 human embryonic fibroblasts , 2010, Aging cell.

[22]  S. Hussain,et al.  Protein carbonylation in skeletal muscles: impact on function. , 2010, Antioxidants & redox signaling.

[23]  K. Ohlendieck,et al.  Proteomic DIGE analysis of the mitochondria‐enriched fraction from aged rat skeletal muscle , 2009, Proteomics.

[24]  K. Ohlendieck,et al.  Drastic increase of myosin light chain MLC-2 in senescent skeletal muscle indicates fast-to-slow fibre transition in sarcopenia of old age. , 2009, European journal of cell biology.

[25]  L. Verdijk,et al.  The impact of sarcopenia and exercise training on skeletal muscle satellite cells , 2009, Ageing Research Reviews.

[26]  C. Flynn,et al.  Proteome profile of functional mitochondria from human skeletal muscle using one-dimensional gel electrophoresis and HPLC-ESI-MS/MS. , 2009, Journal of proteomics.

[27]  M. Dalakas,et al.  Tragedy in a heartbeat: malfunctioning desmin causes skeletal and cardiac muscle disease. , 2009, The Journal of clinical investigation.

[28]  A. Görg,et al.  2‐DE with IPGs , 2009, Electrophoresis.

[29]  A. Lombardi,et al.  Defining the transcriptomic and proteomic profiles of rat ageing skeletal muscle by the use of a cDNA array, 2D- and Blue native-PAGE approach. , 2009, Journal of proteomics.

[30]  Cecilia Gelfi,et al.  Comparative proteomic profile of rat sciatic nerve and gastrocnemius muscle tissues in ageing by 2‐D DIGE , 2009, Proteomics.

[31]  S. Powers,et al.  Xanthine oxidase contributes to mechanical ventilation-induced diaphragmatic oxidative stress and contractile dysfunction. , 2009, Journal of applied physiology.

[32]  S. Powers,et al.  Exercise-induced oxidative stress: cellular mechanisms and impact on muscle force production. , 2008, Physiological reviews.

[33]  Lisa Staunton,et al.  Phosphoproteomic analysis of aged skeletal muscle. , 2008, International journal of molecular medicine.

[34]  J. Papaconstantinou,et al.  Age-related alterations in oxidatively damaged proteins of mouse heart mitochondrial electron transport chain complexes. , 2008, Free radical biology & medicine.

[35]  L. Ferreira,et al.  Muscle-derived ROS and thiol regulation in muscle fatigue. , 2008, Journal of applied physiology.

[36]  N. Breusing,et al.  Regulation of proteasome-mediated protein degradation during oxidative stress and aging , 2008, Biological chemistry.

[37]  C. Flynn,et al.  Characterization of the Human Skeletal Muscle Proteome by One-dimensional Gel Electrophoresis and HPLC-ESI-MS/MS*S , 2008, Molecular & Cellular Proteomics.

[38]  L. Thompson,et al.  Advanced glycation end-product accumulation and associated protein modification in type II skeletal muscle with aging. , 2007, The journals of gerontology. Series A, Biological sciences and medical sciences.

[39]  K. Ohlendieck,et al.  Aging skeletal muscle shows a drastic increase in the small heat shock proteins alphaB-crystallin/HspB5 and cvHsp/HspB7. , 2007, European journal of cell biology.

[40]  D. Ferrington,et al.  Myosin and actin expression and oxidation in aging muscle , 2006, Experimental Gerontology.

[41]  Julian N. Selley,et al.  Global Translational Responses to Oxidative Stress Impact upon Multiple Levels of Protein Synthesis* , 2006, Journal of Biological Chemistry.

[42]  E. Barreiro,et al.  Aging, sex differences, and oxidative stress in human respiratory and limb muscles. , 2006, Free radical biology & medicine.

[43]  D. Ferrington,et al.  Protein nitration with aging in the rat semimembranosus and soleus muscles. , 2006, The journals of gerontology. Series A, Biological sciences and medical sciences.

[44]  B. Friguet Oxidized protein degradation and repair in ageing and oxidative stress , 2006, FEBS letters.

[45]  P. Cerretelli,et al.  The human muscle proteome in aging. , 2006, Journal of proteome research.

[46]  B. Friguet,et al.  Maintenance of proteins and aging: The role of oxidized protein repair , 2006, Free radical research.

[47]  J. Vecchiet,et al.  Human muscle aging: ROS-mediated alterations in rectus abdominis and vastus lateralis muscles , 2005, Experimental Gerontology.

[48]  Richard G. Taylor,et al.  Differential proteome analysis of aging in rat skeletal muscle , 2005, FASEB journal : official publication of the Federation of American Societies for Experimental Biology.

[49]  C. Schöneich,et al.  Proteomic Analysis of Protein Nitration in Aging Skeletal Muscle and Identification of Nitrotyrosine-containing Sequences in Vivo by Nanoelectrospray Ionization Tandem Mass Spectrometry* , 2005, Journal of Biological Chemistry.

[50]  K. Nair,et al.  Decline in skeletal muscle mitochondrial function with aging in humans. , 2005, Proceedings of the National Academy of Sciences of the United States of America.

[51]  A. Görg,et al.  Current two‐dimensional electrophoresis technology for proteomics , 2004, Proteomics.

[52]  M. Tarnopolsky,et al.  Oxidative stress and the mitochondrial theory of aging in human skeletal muscle , 2004, Experimental Gerontology.

[53]  Rina Bandopadhyay,et al.  The expression of DJ-1 (PARK7) in normal human CNS and idiopathic Parkinson's disease. , 2004, Brain : a journal of neurology.

[54]  M. Toledano,et al.  ATP-dependent reduction of cysteine–sulphinic acid by S. cerevisiae sulphiredoxin , 2003, Nature.

[55]  J. Lindsay,et al.  Age-related increase in 4-hydroxynonenal adduction to rat heart alpha-ketoglutarate dehydrogenase does not cause loss of its catalytic activity. , 2003, Antioxidants & redox signaling.

[56]  E. Stadtman,et al.  Free radical-mediated oxidation of free amino acids and amino acid residues in proteins , 2003, Amino Acids.

[57]  K. Davies,et al.  Tyrosine oxidation products: analysis and biological relevance , 2003, Amino Acids.

[58]  R. Aebersold,et al.  Proteomics Analysis of Cellular Response to Oxidative Stress , 2002, The Journal of Biological Chemistry.

[59]  S. Astley,et al.  Antioxidants, reactive oxygen and nitrogen species, gene induction and mitochondrial function. , 2002, Molecular aspects of medicine.

[60]  T. Rabilloud Two‐dimensional gel electrophoresis in proteomics: Old, old fashioned, but it still climbs up the mountains , 2002, Proteomics.

[61]  E. Stadtman,et al.  Oxidative modification of proteins during aging , 2001, Experimental Gerontology.

[62]  M. Reid Nitric oxide, reactive oxygen species, and skeletal muscle contraction. , 2001, Medicine and science in sports and exercise.

[63]  B. Friguet,et al.  Protein Degradation by the Proteasome and Its Implications in Aging , 2000, Annals of the New York Academy of Sciences.

[64]  O. Pansarasa,et al.  Age and sex differences in human skeletal muscle: Role of reactive oxygen species , 2000, Free radical research.

[65]  M. Ünlü Difference Gel Electrophoresis , 1999 .

[66]  S. Heymsfield,et al.  Epidemiology of sarcopenia among the elderly in New Mexico. , 1998, American journal of epidemiology.

[67]  E. Stadtman,et al.  Protein Oxidation in Aging, Disease, and Oxidative Stress* , 1997, The Journal of Biological Chemistry.

[68]  W. Evans What is sarcopenia? , 1995, The journals of gerontology. Series A, Biological sciences and medical sciences.

[69]  Y. Itokawa,et al.  Hydroxyl radical generation in skeletal muscle atrophied by immobilization , 1994, FEBS letters.

[70]  A. Dimarco,et al.  Effect of PEG-superoxide dismutase on the diaphragmatic response to endotoxin. , 1992, The American review of respiratory disease.

[71]  Y. Itokawa,et al.  Oxidative stress in skeletal muscle atrophied by immobilization. , 1991, Acta physiologica Scandinavica.

[72]  H. P. Jones,et al.  Conversion of xanthine dehydrogenase to oxidase in ischemic rat tissues. , 1987, The Journal of clinical investigation.

[73]  B. Friguet,et al.  Changes of the proteasomal system during the aging process. , 2012, Progress in molecular biology and translational science.

[74]  John M. Walker,et al.  The Protein Protocols Handbook , 2009, Springer Protocols Handbooks.

[75]  K. Ohlendieck,et al.  Opposite pathobiochemical fate of pyruvate kinase and adenylate kinase in aged rat skeletal muscle as revealed by proteomic DIGE analysis , 2008, Proteomics.

[76]  Jean-François Hocquette,et al.  Assessment of hierarchical clustering methodologies for proteomic data mining. , 2007, Journal of proteome research.

[77]  M. Beckerle,et al.  Striated muscle cytoarchitecture: an intricate web of form and function. , 2002, Annual review of cell and developmental biology.

[78]  B. Friguet Aging of proteins and the proteasome. , 2002, Progress in molecular and subcellular biology.

[79]  W. Dröge Free radicals in the physiological control of cell function. , 2002, Physiological reviews.

[80]  J. Williams,et al.  Determination of carbonyl groups in oxidized proteins. , 2000, Methods in molecular biology.

[81]  Y. Hidaka [Xanthine oxidase]. , 1999, Nihon rinsho. Japanese journal of clinical medicine.

[82]  N. Araki,et al.  Advanced glycation end products of the Maillard reaction and their relation to aging. , 1994, Gerontology.